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Items: 1 to 50 of 362

1.

From command-line bioinformatics to bioGUI.

Joppich M, Zimmer R.

PeerJ. 2019 Nov 21;7:e8111. doi: 10.7717/peerj.8111. eCollection 2019.

2.

A transcriptional response of Clostridium beijerinckii NRRL B-598 to a butanol shock.

Sedlar K, Kolek J, Gruber M, Jureckova K, Branska B, Csaba G, Vasylkivska M, Zimmer R, Patakova P, Provaznik I.

Biotechnol Biofuels. 2019 Oct 13;12:243. doi: 10.1186/s13068-019-1584-7. eCollection 2019.

3.

The [4+2]-Cycloaddition of α-Nitrosoalkenes with Thiochalcones as a Prototype of Periselective Hetero-Diels-Alder Reactions-Experimental and Computational Studies.

Mlostoń G, Urbaniak K, Jasiński M, Würthwein EU, Heimgartner H, Zimmer R, Reissig HU.

Chemistry. 2019 Aug 20. doi: 10.1002/chem.201903385. [Epub ahead of print]

PMID:
31429509
4.

CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes.

da Silva V, Ramos M, Groenen M, Crooijmans R, Johansson A, Regitano L, Coutinho L, Zimmer R, Waldron L, Geistlinger L.

Bioinformatics. 2019 Aug 8. pii: btz632. doi: 10.1093/bioinformatics/btz632. [Epub ahead of print]

PMID:
31392308
5.

Using Context-Sensitive Text Mining to Identify miRNAs in Different Stages of Atherosclerosis.

Joppich M, Weber C, Zimmer R.

Thromb Haemost. 2019 Aug;119(8):1247-1264. doi: 10.1055/s-0039-1693165. Epub 2019 Aug 2.

PMID:
31378854
6.

MS-EmpiRe Utilizes Peptide-level Noise Distributions for Ultra-sensitive Detection of Differentially Expressed Proteins.

Ammar C, Gruber M, Csaba G, Zimmer R.

Mol Cell Proteomics. 2019 Sep;18(9):1880-1892. doi: 10.1074/mcp.RA119.001509. Epub 2019 Jun 24.

PMID:
31235637
7.

The LANCA three-component reaction to highly substituted β-ketoenamides - versatile intermediates for the synthesis of functionalized pyridine, pyrimidine, oxazole and quinoxaline derivatives.

Lechel T, Kumar R, Bera MK, Zimmer R, Reissig HU.

Beilstein J Org Chem. 2019 Mar 13;15:655-678. doi: 10.3762/bjoc.15.61. eCollection 2019. Review.

8.

Efficient Syntheses of New Super Lewis Basic Tris(dialkylamino)-Substituted Terpyridines and Comparison of Their Methyl Cation Affinities.

Kleoff M, Suhr S, Sarkar B, Zimmer R, Reissig HU, Marin-Luna M, Zipse H.

Chemistry. 2019 Jun 4;25(31):7526-7533. doi: 10.1002/chem.201900450. Epub 2019 May 9.

PMID:
30921483
9.

La vérité et la publicité directe aux consommateurs au Canada sur DUKORAL pour prévenir la diarrhée du voyageur.

Zimmer R.

Can Fam Physician. 2019 Mar;65(3):e87-e90. French. No abstract available.

PMID:
30867187
Free PMC Article
10.

Truth and direct-to-consumer advertising in Canada of DUKORAL for traveler's diarrhea prevention.

Zimmer R.

Can Fam Physician. 2019 Mar;65(3):171-173. No abstract available.

11.

YESdb: integrative analysis of environmental stress in yeast.

Berchtold E, Csaba G, Zimmer R.

Database (Oxford). 2019 Jan 1;2019. pii: baz023. doi: 10.1093/database/baz023.

12.

Peptide-oligourea hybrids analogue of GLP-1 with improved action in vivo.

Fremaux J, Venin C, Mauran L, Zimmer RH, Guichard G, Goudreau SR.

Nat Commun. 2019 Feb 25;10(1):924. doi: 10.1038/s41467-019-08793-y.

13.

Multi-Reference Spectral Library Yields Almost Complete Coverage of Heterogeneous LC-MS/MS Data Sets.

Ammar C, Berchtold E, Csaba G, Schmidt A, Imhof A, Zimmer R.

J Proteome Res. 2019 Apr 5;18(4):1553-1566. doi: 10.1021/acs.jproteome.8b00819. Epub 2019 Mar 8.

PMID:
30793903
14.

Comparison of six breast cancer classifiers using qPCR.

Berchtold E, Vetter M, Gündert M, Csaba G, Fathke C, Ulbrich SE, Thomssen C, Zimmer R, Kantelhardt EJ.

Bioinformatics. 2019 Sep 15;35(18):3412-3420. doi: 10.1093/bioinformatics/btz103.

PMID:
30759193
15.

Ten Things Every Geriatrician Should Know About House Calls.

Yang M, Thomas J, Zimmer R, Cleveland M, Hayashi JL, Colburn JL.

J Am Geriatr Soc. 2019 Jan;67(1):139-144. doi: 10.1111/jgs.15670. Epub 2018 Nov 28. Review.

PMID:
30485403
16.

Minor ailments, major problems: a critical appraisal of Rafferty et al. (2017).

Zimmer R.

Cost Eff Resour Alloc. 2018 Nov 19;16:57. doi: 10.1186/s12962-018-0160-5. eCollection 2018. No abstract available.

17.

Antiviral activity of the mineralocorticoid receptor NR3C2 against Herpes simplex virus Type 1 (HSV-1) infection.

Haas JG, Weber J, Gonzalez O, Zimmer R, Griffiths SJ.

Sci Rep. 2018 Oct 26;8(1):15876. doi: 10.1038/s41598-018-34241-w.

18.

A forgotten vulnerable group: Canadian children visiting relatives in the developing world.

Zimmer R.

CMAJ. 2018 Aug 27;190(34):E1023. doi: 10.1503/cmaj.70191. No abstract available.

19.

Detection of network motifs using three-way ANOVA.

Tavakkolkhah P, Zimmer R, Küffner R.

PLoS One. 2018 Aug 6;13(8):e0201382. doi: 10.1371/journal.pone.0201382. eCollection 2018.

20.

Effect of heat treatment on cytotoxicity of self-adhesive resin cements: Cell viability analysis.

Klein-Júnior CA, Zimmer R, Hentschke GS, Machado DC, Dos Santos RB, Reston EG.

Eur J Dent. 2018 Apr-Jun;12(2):281-286. doi: 10.4103/ejd.ejd_34_18.

21.

miR-103 promotes endothelial maladaptation by targeting lncWDR59.

Natarelli L, Geißler C, Csaba G, Wei Y, Zhu M, di Francesco A, Hartmann P, Zimmer R, Schober A.

Nat Commun. 2018 Jul 6;9(1):2645. doi: 10.1038/s41467-018-05065-z.

22.

Dicer in Macrophages Prevents Atherosclerosis by Promoting Mitochondrial Oxidative Metabolism.

Wei Y, Corbalán-Campos J, Gurung R, Natarelli L, Zhu M, Exner N, Erhard F, Greulich F, Geißler C, Uhlenhaut NH, Zimmer R, Schober A.

Circulation. 2018 Oct 30;138(18):2007-2020. doi: 10.1161/CIRCULATIONAHA.117.031589. Erratum in: Circulation. 2019 Apr 23;139(17):e888.

PMID:
29748186
23.

Competing visions for travel health services in Canada.

Zimmer R.

J Travel Med. 2018 Jan 1;25(1). doi: 10.1093/jtm/tax096. No abstract available.

PMID:
29726915
24.

Effect of At-home and In-office Bleaching on Marginal Microleakage in Composite Resin Restorations using Two Adhesive Systems.

Klein CA Jr, da Silva D, Reston EG, Borghetti DL, Zimmer R.

J Contemp Dent Pract. 2018 Mar 1;19(3):248-252.

PMID:
29603692
25.

Improved Ribo-seq enables identification of cryptic translation events.

Erhard F, Halenius A, Zimmermann C, L'Hernault A, Kowalewski DJ, Weekes MP, Stevanovic S, Zimmer R, Dölken L.

Nat Methods. 2018 May;15(5):363-366. doi: 10.1038/nmeth.4631. Epub 2018 Mar 12.

26.

Handheld Ultrasound as a Novel Predictive Tool in Atrial Fibrillation: Prediction of Outcomes Following Electrical Cardioversion.

Kehl D, Zimmer R, Sudan M, Kedan I.

JMIR Cardio. 2018 Mar 8;2(1):e7. doi: 10.2196/cardio.9534.

27.

Widespread modulation of gene expression by copy number variation in skeletal muscle.

Geistlinger L, da Silva VH, Cesar ASM, Tizioto PC, Waldron L, Zimmer R, Regitano LCA, Coutinho LL.

Sci Rep. 2018 Jan 23;8(1):1399. doi: 10.1038/s41598-018-19782-4.

28.

Introduction.

Zimmer RB.

J Am Psychoanal Assoc. 2017 Oct;65(5):819-827. doi: 10.1177/0003065117737753. No abstract available.

PMID:
29134833
29.

Alcohol Drinking and Blood Alcohol Concentration Revisited.

Dilley JE, Nicholson ER, Fischer SM, Zimmer R, Froehlich JC.

Alcohol Clin Exp Res. 2018 Feb;42(2):260-269. doi: 10.1111/acer.13549. Epub 2017 Dec 13.

30.

Derivation and validation of a preoperative risk model for postoperative mortality (SAMPE model): An approach to care stratification.

Stefani LC, Gutierrez CS, Castro SMJ, Zimmer RL, Diehl FP, Meyer LE, Caumo W.

PLoS One. 2017 Oct 30;12(10):e0187122. doi: 10.1371/journal.pone.0187122. eCollection 2017.

31.

EBF1 binds to EBNA2 and promotes the assembly of EBNA2 chromatin complexes in B cells.

Glaser LV, Rieger S, Thumann S, Beer S, Kuklik-Roos C, Martin DE, Maier KC, Harth-Hertle ML, Grüning B, Backofen R, Krebs S, Blum H, Zimmer R, Erhard F, Kempkes B.

PLoS Pathog. 2017 Oct 2;13(10):e1006664. doi: 10.1371/journal.ppat.1006664. eCollection 2017 Oct.

32.

Where is the outrage? The abandonment of long-established public health travel clinics in Saskatchewan.

Zimmer RA.

Can J Public Health. 2017 Sep 14;108(3):e338. doi: 10.17269/CJPH.108.6339. No abstract available.

PMID:
28910261
33.

Wearable technology for cardiology: An update and framework for the future.

Pevnick JM, Birkeland K, Zimmer R, Elad Y, Kedan I.

Trends Cardiovasc Med. 2018 Feb;28(2):144-150. doi: 10.1016/j.tcm.2017.08.003. Epub 2017 Aug 9. Review.

34.

Noxious newts and their natural enemies: Experimental effects of tetrodotoxin exposure on trematode parasites and aquatic macroinvertebrates.

Calhoun DM, Bucciarelli GM, Kats LB, Zimmer RK, Johnson PTJ.

Toxicon. 2017 Oct;137:120-127. doi: 10.1016/j.toxicon.2017.07.021. Epub 2017 Jul 27.

35.

Alkoxyallene-Based Stereodivergent Syntheses of (-)-Hyacinthacine B4 and of Putative Hyacinthacine C5 Epimers: Proposal of Hyacinthacine C5 Structure.

Pecchioli T, Cardona F, Reissig HU, Zimmer R, Goti A.

J Org Chem. 2017 Jun 2;82(11):5835-5844. doi: 10.1021/acs.joc.7b00667. Epub 2017 May 16.

PMID:
28480707
36.

Usefulness of Serial Measurements of Inferior Vena Cava Diameter by VscanTM to Identify Patients With Heart Failure at High Risk of Hospitalization.

Khandwalla RM, Birkeland KT, Zimmer R, Henry TD, Nazarian R, Sudan M, Mirocha J, Cha J, Kedan I.

Am J Cardiol. 2017 May 15;119(10):1631-1636. doi: 10.1016/j.amjcard.2017.02.007. Epub 2017 Feb 28.

PMID:
28442126
37.

Keystone predation and molecules of keystone significance.

Zimmer RK, Ferrier GA, Kim SJ, Ogorzalek Loo RR, Zimmer CA, Loo JA.

Ecology. 2017 Jun;98(6):1710-1721. doi: 10.1002/ecy.1849. Epub 2017 May 15.

38.

Implementation of a Home Monitoring System for Heart Failure Patients: A Feasibility Study.

Kohn MS, Haggard J, Kreindler J, Birkeland K, Kedan I, Zimmer R, Khandwalla R.

JMIR Res Protoc. 2017 Mar 20;6(3):e46. doi: 10.2196/resprot.5744.

39.

Synthesis of (+)-Greek Tobacco Lactone via a Diastereoablative Epoxidation and a Selenium-Catalyzed Oxidative Cyclization.

Leisering S, Riaño I, Depken C, Gross LJ, Weber M, Lentz D, Zimmer R, Stark CB, Breder A, Christmann M.

Org Lett. 2017 Mar 17;19(6):1478-1481. doi: 10.1021/acs.orglett.7b00484. Epub 2017 Mar 3.

PMID:
28257212
40.

Manananggal - a novel viewer for alternative splicing events.

Barann M, Zimmer R, Birzele F.

BMC Bioinformatics. 2017 Feb 21;18(1):120. doi: 10.1186/s12859-017-1548-5.

41.

RelExplain-integrating data and networks to explain biological processes.

Berchtold E, Csaba G, Zimmer R.

Bioinformatics. 2017 Jun 15;33(12):1837-1844. doi: 10.1093/bioinformatics/btx060.

PMID:
28165113
42.

Iodination of carbohydrate-derived 1,2-oxazines to enantiopure 5-iodo-3,6-dihydro-2H-1,2-oxazines and subsequent palladium-catalyzed cross-coupling reactions.

Medvecký M, Linder I, Schefzig L, Reissig HU, Zimmer R.

Beilstein J Org Chem. 2016 Dec 29;12:2898-2905. doi: 10.3762/bjoc.12.289. eCollection 2016.

43.

Individual female differences in chemoattractant production change the scale of sea urchin gamete interactions.

Hussain YH, Sadilek M, Salad S, Zimmer RK, Riffell JA.

Dev Biol. 2017 Feb 15;422(2):186-197. doi: 10.1016/j.ydbio.2017.01.006. Epub 2017 Jan 11.

44.

Chemical Ecology of Wave-Swept Shores: the Primacy of Contact Cues in Predation by Whelks.

Ferrier GA, Zimmer CA, Zimmer RK.

Biol Bull. 2016 Dec;231(3):207-215. doi: 10.1086/691068.

PMID:
28048962
45.

A multifunctional chemical cue drives opposing demographic processes and structures ecological communities.

Zimmer RK, Ferrier GA, Kim SJ, Kaddis CS, Zimmer CA, Loo JA.

Ecology. 2016 Sep;97(9):2232-2239. doi: 10.1002/ecy.1455.

46.

Evaluating Transcription Factor Activity Changes by Scoring Unexplained Target Genes in Expression Data.

Berchtold E, Csaba G, Zimmer R.

PLoS One. 2016 Oct 10;11(10):e0164513. doi: 10.1371/journal.pone.0164513. eCollection 2016.

47.

COMMENTARY ON JUDITH FINGERT CHUSED'S "AN ANALYST'S UNCERTAINTY AND FEAR".

Zimmer RB.

Psychoanal Q. 2016 Oct;85(4):867-883. doi: 10.1002/psaq.12108. No abstract available.

PMID:
27704582
48.

Stereoselective synthesis of tricyclic compounds by intramolecular palladium-catalyzed addition of aryl iodides to carbonyl groups.

Saadi J, Bentz C, Redies K, Lentz D, Zimmer R, Reissig HU.

Beilstein J Org Chem. 2016 Jun 16;12:1236-42. doi: 10.3762/bjoc.12.118. eCollection 2016.

49.

The efficacy of sonographic measurement of inferior vena cava diameter as an estimate of central venous pressure.

Ciozda W, Kedan I, Kehl DW, Zimmer R, Khandwalla R, Kimchi A.

Cardiovasc Ultrasound. 2016 Aug 20;14(1):33. doi: 10.1186/s12947-016-0076-1. Review.

50.

Resolving Lipid Mediators Maresin 1 and Resolvin D2 Prevent Atheroprogression in Mice.

Viola JR, Lemnitzer P, Jansen Y, Csaba G, Winter C, Neideck C, Silvestre-Roig C, Dittmar G, Döring Y, Drechsler M, Weber C, Zimmer R, Cenac N, Soehnlein O.

Circ Res. 2016 Oct 14;119(9):1030-1038. Epub 2016 Aug 16.

PMID:
27531933

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