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Items: 30

1.

Ultrahigh-throughput functional profiling of microbiota communities.

Terekhov SS, Smirnov IV, Malakhova MV, Samoilov AE, Manolov AI, Nazarov AS, Danilov DV, Dubiley SA, Osterman IA, Rubtsova MP, Kostryukova ES, Ziganshin RH, Kornienko MA, Vanyushkina AA, Bukato ON, Ilina EN, Vlasov VV, Severinov KV, Gabibov AG, Altman S.

Proc Natl Acad Sci U S A. 2018 Sep 18;115(38):9551-9556. doi: 10.1073/pnas.1811250115. Epub 2018 Sep 4.

2.

Cloning and characterization of serpin from red king crab Paralithodes camtschaticus.

Kostin NN, Bobik TV, Shurdova EM, Ziganshin RH, Surina EA, Shagin DA, Shagina IA, Knorre VD, Isaev VA, Rudenskaya GN, Gabibov AG, Smirnov IV.

Fish Shellfish Immunol. 2018 Oct;81:99-107. doi: 10.1016/j.fsi.2018.07.014. Epub 2018 Jul 10.

PMID:
30006043
3.

Proteomics-based identification of hypoxia-sensitive membrane-bound proteins in rat erythrocytes.

Sidorenko SV, Ziganshin RH, Luneva OG, Deev LI, Alekseeva NV, Maksimov GV, Grygorczyk R, Orlov SN.

J Proteomics. 2018 Jul 30;184:25-33. doi: 10.1016/j.jprot.2018.06.008. Epub 2018 Jun 18. No abstract available.

PMID:
29929038
4.

[Enhancement of Na,K-ATPase Activity as a Result of Removal of Redox Modifications from Cysteine Residues of the al Subunit: the Effect of Reducing Agents].

Dergousova EA, Petrushanko IY, Klimanova EA, Mitkevich VA, Ziganshin RH, Lopina OD, Makarov AA.

Mol Biol (Mosk). 2018 Mar-Apr;52(2):289-293. doi: 10.7868/S002689841802012X. Russian.

5.

Effect of Reduction of Redox Modifications of Cys-Residues in the Na,K-ATPase α1-Subunit on Its Activity.

Dergousova EA, Petrushanko IY, Klimanova EA, Mitkevich VA, Ziganshin RH, Lopina OD, Makarov AA.

Biomolecules. 2017 Feb 21;7(1). pii: E18. doi: 10.3390/biom7010018.

6.

Mediators and Biomarkers of Inflammation in Meningitis: Cytokine and Peptidome Profiling of Cerebrospinal Fluid.

Belogurov AA Jr, Ivanova OM, Lomakin YA, Ziganshin RH, Vaskina MI, Knorre VD, Klimova EA, Gabibov AG, Ivanov VT, Govorun VM.

Biochemistry (Mosc). 2016 Nov;81(11):1293-1302.

7.

The Pathogenesis of the Demyelinating Form of Guillain-Barre Syndrome (GBS): Proteo-peptidomic and Immunological Profiling of Physiological Fluids.

Ziganshin RH, Ivanova OM, Lomakin YA, Belogurov AA Jr, Kovalchuk SI, Azarkin IV, Arapidi GP, Anikanov NA, Shender VO, Piradov MA, Suponeva NA, Vorobyeva AA, Gabibov AG, Ivanov VT, Govorun VM.

Mol Cell Proteomics. 2016 Jul;15(7):2366-78. doi: 10.1074/mcp.M115.056036. Epub 2016 May 3.

8.

Quantitative Proteomic Analysis of Venoms from Russian Vipers of Pelias Group: Phospholipases A₂ are the Main Venom Components.

Kovalchuk SI, Ziganshin RH, Starkov VG, Tsetlin VI, Utkin YN.

Toxins (Basel). 2016 Apr 12;8(4):105. doi: 10.3390/toxins8040105.

9.

Nonconventional three-finger toxin BMLCL from krait Bungarus multicinctus venom with high affinity interacts with nicotinic acetylcholine receptors.

Utkin YN, Kasheverov IE, Kudryavtsev DS, Andreeva TV, Starkov VG, Ziganshin RH, Kuznetsov DV, Anh HN, Thao NT, Khoa NC, Tsetlin VI.

Dokl Biochem Biophys. 2015;464:294-7. doi: 10.1134/S1607672915050099. Epub 2015 Oct 31.

PMID:
26518551
10.

Bovine serum albumin as a universal suppressor of non-specific peptide binding in vials prior to nano-chromatography coupled mass-spectrometry analysis.

Kovalchuk SI, Anikanov NA, Ivanova OM, Ziganshin RH, Govorun VM.

Anal Chim Acta. 2015 Sep 17;893:57-64. doi: 10.1016/j.aca.2015.08.027. Epub 2015 Aug 25.

PMID:
26398423
11.

Quantitative proteomic analysis of Vietnamese krait venoms: Neurotoxins are the major components in Bungarus multicinctus and phospholipases A2 in Bungarus fasciatus.

Ziganshin RH, Kovalchuk SI, Arapidi GP, Starkov VG, Hoang AN, Thi Nguyen TT, Nguyen KC, Shoibonov BB, Tsetlin VI, Utkin YN.

Toxicon. 2015 Dec 1;107(Pt B):197-209. doi: 10.1016/j.toxicon.2015.08.026. Epub 2015 Sep 2.

PMID:
26341420
12.

Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.

Pletnev VZ, Pletneva NV, Sarkisyan KS, Mishin AS, Lukyanov KA, Goryacheva EA, Ziganshin RH, Dauter Z, Pletnev S.

Acta Crystallogr D Biol Crystallogr. 2015 Aug;71(Pt 8):1699-707. doi: 10.1107/S1399004715010159. Epub 2015 Jul 31.

13.

Specific pools of endogenous peptides are present in gametophore, protonema, and protoplast cells of the moss Physcomitrella patens.

Fesenko IA, Arapidi GP, Skripnikov AY, Alexeev DG, Kostryukova ES, Manolov AI, Altukhov IA, Khazigaleeva RA, Seredina AV, Kovalchuk SI, Ziganshin RH, Zgoda VG, Novikova SE, Semashko TA, Slizhikova DK, Ptushenko VV, Gorbachev AY, Govorun VM, Ivanov VT.

BMC Plant Biol. 2015 Mar 15;15:87. doi: 10.1186/s12870-015-0468-7.

14.

Venoms of kraits Bungarus multicinctus and Bungarus fasciatus contain anticoagulant proteins.

Utkin YN, Gantsova EA, Andreeva TV, Starkov VG, Ziganshin RH, Anh HN, Thao NT, Khoa NC, Tsetlin VI.

Dokl Biochem Biophys. 2015;460:53-8. doi: 10.1134/S1607672915010159. Epub 2015 Mar 13. No abstract available.

PMID:
25772992
15.

Novel peptide chemistry in terrestrial animals: natural luciferin analogues from the bioluminescent earthworm Fridericia heliota.

Dubinnyi MA, Tsarkova AS, Petushkov VN, Kaskova ZM, Rodionova NS, Kovalchuk SI, Ziganshin RH, Baranov MS, Mineev KS, Yampolsky IV.

Chemistry. 2015 Mar 2;21(10):3942-7. doi: 10.1002/chem.201406498. Epub 2015 Feb 4.

PMID:
25650756
16.

Proteome-metabolome profiling of ovarian cancer ascites reveals novel components involved in intercellular communication.

Shender VO, Pavlyukov MS, Ziganshin RH, Arapidi GP, Kovalchuk SI, Anikanov NA, Altukhov IA, Alexeev DG, Butenko IO, Shavarda AL, Khomyakova EB, Evtushenko E, Ashrafyan LA, Antonova IB, Kuznetcov IN, Gorbachev AY, Shakhparonov MI, Govorun VM.

Mol Cell Proteomics. 2014 Dec;13(12):3558-71. doi: 10.1074/mcp.M114.041194. Epub 2014 Sep 30.

17.

Amyloidogenic peptides of yeast cell wall glucantransferase Bgl2p as a model for the investigation of its pH-dependent fibril formation.

Bezsonov EE, Groenning M, Galzitskaya OV, Gorkovskii AA, Semisotnov GV, Selyakh IO, Ziganshin RH, Rekstina VV, Kudryashova IB, Kuznetsov SA, Kulaev IS, Kalebina TS.

Prion. 2013 Mar-Apr;7(2):175-84. doi: 10.4161/pri.22992. Epub 2012 Dec 3.

18.

Growth-dependent release of carbohydrate metabolism-related and antioxidant enzymes from Staphylococcus aureus strain 6 as determined by proteomic analysis.

Donenko FV, Gruber IM, Semenova IB, Priyatkin RG, Ziganshin RH, Zaryadyeva EA, Ignatova OM, Kurbatova EA, Kiselevsky MV, Efferth T.

Exp Ther Med. 2011 Nov;2(6):1199-1204. Epub 2011 Sep 1.

19.

S-glutathionylation of the Na,K-ATPase catalytic α subunit is a determinant of the enzyme redox sensitivity.

Petrushanko IY, Yakushev S, Mitkevich VA, Kamanina YV, Ziganshin RH, Meng X, Anashkina AA, Makhro A, Lopina OD, Gassmann M, Makarov AA, Bogdanova A.

J Biol Chem. 2012 Sep 14;287(38):32195-205. doi: 10.1074/jbc.M112.391094. Epub 2012 Jul 13.

20.

Poly(ADP-ribosyl)ation of mannose-binding lectin out of human kidney cells.

Sidorova NN, Kurchashova SY, Yarahmedov TY, Ziganshin RH, Kuimov AN.

Mol Cell Biochem. 2011 Jun;352(1-2):231-8. doi: 10.1007/s11010-011-0758-9. Epub 2011 Mar 6.

PMID:
21380727
21.

Predicted bacteriorhodopsin from Exiguobacterium sibiricum is a functional proton pump.

Petrovskaya LE, Lukashev EP, Chupin VV, Sychev SV, Lyukmanova EN, Kryukova EA, Ziganshin RH, Spirina EV, Rivkina EM, Khatypov RA, Erokhina LG, Gilichinsky DA, Shuvalov VA, Kirpichnikov MP.

FEBS Lett. 2010 Oct 8;584(19):4193-6. doi: 10.1016/j.febslet.2010.09.005. Epub 2010 Sep 8.

22.

Identification of serpin (alpha-1-antitrypsin) as serum growth inhibitory factor in murine ehrlich carcinoma by proteomics.

Donenko FV, Ziganshin RH, Anisimova NY, Voyushin KE, Sitdikova SM, Amandzholov BS, Kiselevskii MV, Efferth T.

Cancer Genomics Proteomics. 2010 May-Jun;7(3):147-56.

PMID:
20551247
23.

Oligopeptidase B from Serratia proteamaculans. I. Determination of primary structure, isolation, and purification of wild-type and recombinant enzyme variants.

Khairullin RF, Mikhailova AG, Sebyakina TY, Lubenets NL, Ziganshin RH, Demidyuk IV, Gromova TY, Kostrov SV, Rumsh LD.

Biochemistry (Mosc). 2009 Oct;74(10):1164-72.

PMID:
19916930
24.

Interaction of alpha-conotoxin ImII and its analogs with nicotinic receptors and acetylcholine-binding proteins: additional binding sites on Torpedo receptor.

Kasheverov IE, Zhmak MN, Fish A, Rucktooa P, Khruschov AY, Osipov AV, Ziganshin RH, D'hoedt D, Bertrand D, Sixma TK, Smit AB, Tsetlin VI.

J Neurochem. 2009 Nov;111(4):934-44. doi: 10.1111/j.1471-4159.2009.06359.x. Epub 2009 Aug 27.

25.

Chaperone Skp from Yersinia pseudotuberculosis exhibits immunoglobulin G binding ability.

Sidorin EV, Ziganshin RH, Naberezhnykh GA, Likhatskaya GN, Trifonov EV, Anastiuk SD, Chernikov OV, Solov'eva TF.

Biochemistry (Mosc). 2009 Apr;74(4):406-15.

PMID:
19463094
26.

Cysteine-rich venom proteins from the snakes of Viperinae subfamily - molecular cloning and phylogenetic relationship.

Ramazanova AS, Starkov VG, Osipov AV, Ziganshin RH, Filkin SY, Tsetlin VI, Utkin YN.

Toxicon. 2009 Jan;53(1):162-8. doi: 10.1016/j.toxicon.2008.11.001. Epub 2008 Nov 12.

PMID:
19041663
27.
28.

Neokyotorphin and neokyotorphin (1-4): secretion by erythrocytes and regulation of tumor cell growth.

Blishchenko EY, Mernenko OA, Yatskin ON, Ziganshin RH, Philippova MM, Karelin AA, Ivanov VT.

FEBS Lett. 1997 Sep 1;414(1):125-8.

29.

The effect of some peptides from the hibernating brain on Ca2+ current in cardiac cells and on the activity of septal neurons.

Kokoz YM, Zenchenko KI, Alekseev AE, Korystova AF, Lankina DA, Ziganshin RH, Mikhaleva II, Ivanov VT.

FEBS Lett. 1997 Jul 7;411(1):71-6.

30.

Neokyotorphin and neokyotorphin (1-4): cytolytic activity and comparative levels in rat tissues.

Blischenko EYu, Mernenko OA, Yatskin ON, Ziganshin RH, Philippova MM, Karelin AA, Ivanov VT.

Biochem Biophys Res Commun. 1996 Jul 25;224(3):721-7.

PMID:
8713113

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