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Items: 1 to 50 of 461

1.

A model for the aberrant DNA methylomes in aging cells and cancer cells.

Zhang H, Zhang K, Zhu JK.

Biochem Soc Trans. 2019 Jul 18. pii: BST20180218. doi: 10.1042/BST20180218. [Epub ahead of print] Review.

PMID:
31320500
2.

Nucleocytoplasmic Trafficking of the Arabidopsis WD40 Repeat Protein XIW1 Regulates ABI5 Stability and Abscisic Acid Responses.

Xu X, Wan W, Jiang G, Xi Y, Huang H, Cai J, Chang Y, Duan CG, Mangrauthia SK, Peng X, Zhu JK, Zhu G.

Mol Plant. 2019 Jul 8. pii: S1674-2052(19)30232-1. doi: 10.1016/j.molp.2019.07.001. [Epub ahead of print]

PMID:
31295628
3.

Perspectives on the application of genome editing technologies in crop breeding.

Hua K, Zhang J, Botella JR, Ma C, Kong F, Liu B, Zhu JK.

Mol Plant. 2019 Jun 28. pii: S1674-2052(19)30230-8. doi: 10.1016/j.molp.2019.06.009. [Epub ahead of print] Review.

PMID:
31260812
4.

Bipartite anchoring of SCREAM enforces stomatal initiation by coupling MAP kinases to SPEECHLESS.

Putarjunan A, Ruble J, Srivastava A, Zhao C, Rychel AL, Hofstetter AK, Tang X, Zhu JK, Tama F, Zheng N, Torii KU.

Nat Plants. 2019 Jul;5(7):742-754. doi: 10.1038/s41477-019-0440-x. Epub 2019 Jun 24.

PMID:
31235876
5.

DEMETER plays a role in DNA demethylation and disease response in somatic tissues of Arabidopsis.

Schumann U, Lee JM, Smith NA, Zhong C, Zhu JK, Dennis ES, Millar AA, Wang MB.

Epigenetics. 2019 Jun 19:1-14. doi: 10.1080/15592294.2019.1631113. [Epub ahead of print]

PMID:
31189415
6.

Cystic pancreatic neuroendocrine tumors: A distinctive subgroup with indolent biological behavior? A systematic review and meta-analysis.

Zhu JK, Wu D, Xu JW, Huang X, Jiang YY, Edil BH, Li M, Hu SY, Zhan HX.

Pancreatology. 2019 May 27. pii: S1424-3903(19)30575-7. doi: 10.1016/j.pan.2019.05.462. [Epub ahead of print]

PMID:
31160191
7.

Peroxisomal β-oxidation regulates histone acetylation and DNA methylation in Arabidopsis.

Wang L, Wang C, Liu X, Cheng J, Li S, Zhu JK, Gong Z.

Proc Natl Acad Sci U S A. 2019 May 21;116(21):10576-10585. doi: 10.1073/pnas.1904143116. Epub 2019 May 7.

PMID:
31064880
8.

Arabinose biosynthesis is critical for salt stress tolerance in Arabidopsis.

Zhao C, Zayed O, Zeng F, Liu C, Zhang L, Zhu P, Hsu CC, Tuncil YE, Tao WA, Carpita NC, Zhu JK.

New Phytol. 2019 Apr 22. doi: 10.1111/nph.15867. [Epub ahead of print]

PMID:
31009077
9.

Optimizing base editors for improved efficiency and expanded editing scope in rice.

Wang M, Wang Z, Mao Y, Lu Y, Yang R, Tao X, Zhu JK.

Plant Biotechnol J. 2019 Apr 8. doi: 10.1111/pbi.13124. [Epub ahead of print] No abstract available.

10.

Genome Engineering in Rice Using Cas9 Variants that Recognize NG PAM Sequences.

Hua K, Tao X, Han P, Wang R, Zhu JK.

Mol Plant. 2019 Jul 1;12(7):1003-1014. doi: 10.1016/j.molp.2019.03.009. Epub 2019 Mar 27.

PMID:
30928636
11.

EXPORTIN 1A prevents transgene silencing in Arabidopsis by modulating nucleo-cytoplasmic partitioning of HDA6.

Zhu G, Chang Y, Xu X, Tang K, Chen C, Lei M, Zhu JK, Duan CG.

J Integr Plant Biol. 2019 Jan 30. doi: 10.1111/jipb.12787. [Epub ahead of print]

PMID:
30697937
12.

The genome of broomcorn millet.

Zou C, Li L, Miki D, Li D, Tang Q, Xiao L, Rajput S, Deng P, Peng L, Jia W, Huang R, Zhang M, Sun Y, Hu J, Fu X, Schnable PS, Chang Y, Li F, Zhang H, Feng B, Zhu X, Liu R, Schnable JC, Zhu JK, Zhang H.

Nat Commun. 2019 Jan 25;10(1):436. doi: 10.1038/s41467-019-08409-5.

13.

Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome.

Yang Y, Tang K, Datsenka TU, Liu W, Lv S, Lang Z, Wang X, Gao J, Wang W, Nie W, Chu Z, Zhang H, Handa AK, Zhu JK, Zhang H.

J Integr Plant Biol. 2019 Jan 16. doi: 10.1111/jipb.12778. [Epub ahead of print]

PMID:
30652405
14.

Global increase in DNA methylation during orange fruit development and ripening.

Huang H, Liu R, Niu Q, Tang K, Zhang B, Zhang H, Chen K, Zhu JK, Lang Z.

Proc Natl Acad Sci U S A. 2019 Jan 22;116(4):1430-1436. doi: 10.1073/pnas.1815441116. Epub 2019 Jan 11.

15.

A group of SUVH methyl-DNA binding proteins regulate expression of the DNA demethylase ROS1 in Arabidopsis.

Xiao X, Zhang J, Li T, Fu X, Satheesh V, Niu Q, Lang Z, Zhu JK, Lei M.

J Integr Plant Biol. 2019 Feb;61(2):110-119. doi: 10.1111/jipb.12768.

PMID:
30589237
16.

A Highly Efficient Cell Division-Specific CRISPR/Cas9 System Generates Homozygous Mutants for Multiple Genes in Arabidopsis.

Feng Z, Zhang Z, Hua K, Gao X, Mao Y, Botella JR, Zhu JK.

Int J Mol Sci. 2018 Dec 7;19(12). pii: E3925. doi: 10.3390/ijms19123925.

17.

Ionic Conduction in Composite Polymer Electrolytes: Case of PEO:Ga-LLZO Composites.

Li Z, Huang HM, Zhu JK, Wu JF, Yang H, Wei L, Guo X.

ACS Appl Mater Interfaces. 2019 Jan 9;11(1):784-791. doi: 10.1021/acsami.8b17279. Epub 2018 Dec 24.

PMID:
30525410
18.

Leucine-rich repeat extensin proteins regulate plant salt tolerance in Arabidopsis.

Zhao C, Zayed O, Yu Z, Jiang W, Zhu P, Hsu CC, Zhang L, Tao WA, Lozano-Durán R, Zhu JK.

Proc Natl Acad Sci U S A. 2018 Dec 18;115(51):13123-13128. doi: 10.1073/pnas.1816991115. Epub 2018 Dec 4.

19.

Downregulation of RdDM during strawberry fruit ripening.

Cheng J, Niu Q, Zhang B, Chen K, Yang R, Zhu JK, Zhang Y, Lang Z.

Genome Biol. 2018 Dec 4;19(1):212. doi: 10.1186/s13059-018-1587-x.

20.

Developing naturally stress-resistant crops for a sustainable agriculture.

Zhang H, Li Y, Zhu JK.

Nat Plants. 2018 Dec;4(12):989-996. doi: 10.1038/s41477-018-0309-4. Epub 2018 Nov 26. Review.

PMID:
30478360
21.

Retrospective and perspective of plant epigenetics in China.

Duan CG, Zhu JK, Cao X.

J Genet Genomics. 2018 Nov 20;45(11):621-638. doi: 10.1016/j.jgg.2018.09.004. Epub 2018 Nov 6. Review.

PMID:
30455036
22.

Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin.

Zhang C, Du X, Tang K, Yang Z, Pan L, Zhu P, Luo J, Jiang Y, Zhang H, Wan H, Wang X, Wu F, Tao WA, He XJ, Zhang H, Bressan RA, Du J, Zhu JK.

Nat Commun. 2018 Oct 31;9(1):4547. doi: 10.1038/s41467-018-06965-w.

23.

Four putative SWI2/SNF2 chromatin remodelers have dual roles in regulating DNA methylation in Arabidopsis.

Yang DL, Zhang G, Wang L, Li J, Xu D, Di C, Tang K, Yang L, Zeng L, Miki D, Duan CG, Zhang H, Zhu JK.

Cell Discov. 2018 Oct 16;4:55. doi: 10.1038/s41421-018-0056-8. eCollection 2018.

24.

DNA demethylase ROS1 negatively regulates the imprinting of DOGL4 and seed dormancy in Arabidopsis thaliana.

Zhu H, Xie W, Xu D, Miki D, Tang K, Huang CF, Zhu JK.

Proc Natl Acad Sci U S A. 2018 Oct 16;115(42):E9962-E9970. doi: 10.1073/pnas.1812847115. Epub 2018 Sep 28.

25.

Manipulating plant RNA-silencing pathways to improve the gene editing efficiency of CRISPR/Cas9 systems.

Mao Y, Yang X, Zhou Y, Zhang Z, Botella JR, Zhu JK.

Genome Biol. 2018 Sep 28;19(1):149. doi: 10.1186/s13059-018-1529-7.

26.

Understanding the Molecular Basis of Salt Sequestration in Epidermal Bladder Cells of Chenopodium quinoa.

Böhm J, Messerer M, Müller HM, Scholz-Starke J, Gradogna A, Scherzer S, Maierhofer T, Bazihizina N, Zhang H, Stigloher C, Ache P, Al-Rasheid KAS, Mayer KFX, Shabala S, Carpaneto A, Haberer G, Zhu JK, Hedrich R.

Curr Biol. 2018 Oct 8;28(19):3075-3085.e7. doi: 10.1016/j.cub.2018.08.004. Epub 2018 Sep 20.

PMID:
30245105
27.

Facile Three-Component Synthesis, Insecticidal and Antifungal Evaluation of Novel Dihydropyridine Derivatives.

Yang GZ, Shang XF, Cheng PL, Yin XD, Zhu JK, Liu YQ, Zhang J, Zhang ZJ.

Molecules. 2018 Sep 21;23(10). pii: E2422. doi: 10.3390/molecules23102422.

28.

High-Throughput Phosphorylation Screening and Validation through Ti(IV)-Nanopolymer Functionalized Reverse Phase Phosphoprotein Array.

Zhang Y, Zhao C, Li L, Hsu CC, Zhu JK, Iliuk A, Tao WA.

Anal Chem. 2018 Sep 4;90(17):10263-10270. doi: 10.1021/acs.analchem.8b01843. Epub 2018 Aug 23.

PMID:
30103608
29.

MYC-type transcription factors, MYC67 and MYC70, interact with ICE1 and negatively regulate cold tolerance in Arabidopsis.

Ohta M, Sato A, Renhu N, Yamamoto T, Oka N, Zhu JK, Tada Y, Suzaki T, Miura K.

Sci Rep. 2018 Aug 2;8(1):11622. doi: 10.1038/s41598-018-29722-x.

30.

Expanding the base editing scope in rice by using Cas9 variants.

Hua K, Tao X, Zhu JK.

Plant Biotechnol J. 2019 Feb;17(2):499-504. doi: 10.1111/pbi.12993. Epub 2018 Oct 5.

31.

Universal Plant Phosphoproteomics Workflow and Its Application to Tomato Signaling in Response to Cold Stress.

Hsu CC, Zhu Y, Arrington JV, Paez JS, Wang P, Zhu P, Chen IH, Zhu JK, Tao WA.

Mol Cell Proteomics. 2018 Oct;17(10):2068-2080. doi: 10.1074/mcp.TIR118.000702. Epub 2018 Jul 13.

PMID:
30006488
32.

Arabidopsis Duodecuple Mutant of PYL ABA Receptors Reveals PYL Repression of ABA-Independent SnRK2 Activity.

Zhao Y, Zhang Z, Gao J, Wang P, Hu T, Wang Z, Hou YJ, Wan Y, Liu W, Xie S, Lu T, Xue L, Liu Y, Macho AP, Tao WA, Bressan RA, Zhu JK.

Cell Rep. 2018 Jun 12;23(11):3340-3351.e5. doi: 10.1016/j.celrep.2018.05.044.

33.

Application of pancreaticojejunostomy with one-layer suture in pancreaticoduodenectomy: A retrospective cohort study.

Liu CZ, Zhu JK, Xu Q, Liu FY, Wang YD, Zhu M.

Int J Surg. 2018 Aug;56:68-72. doi: 10.1016/j.ijsu.2018.06.005. Epub 2018 Jun 8.

PMID:
29890300
34.

LncRNA FAS-AS1 promotes the degradation of extracellular matrix of cartilage in osteoarthritis.

Zhu JK, He TD, Wei ZX, Wang YM.

Eur Rev Med Pharmacol Sci. 2018 May;22(10):2966-2972. doi: 10.26355/eurrev_201805_15051.

35.

Dynamics and function of DNA methylation in plants.

Zhang H, Lang Z, Zhu JK.

Nat Rev Mol Cell Biol. 2018 Aug;19(8):489-506. doi: 10.1038/s41580-018-0016-z. Review.

PMID:
29784956
36.

Epigenetic switch from repressive to permissive chromatin in response to cold stress.

Park J, Lim CJ, Shen M, Park HJ, Cha JY, Iniesto E, Rubio V, Mengiste T, Zhu JK, Bressan RA, Lee SY, Lee BH, Jin JB, Pardo JM, Kim WY, Yun DJ.

Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):E5400-E5409. doi: 10.1073/pnas.1721241115. Epub 2018 May 21.

37.

Mutations in a subfamily of abscisic acid receptor genes promote rice growth and productivity.

Miao C, Xiao L, Hua K, Zou C, Zhao Y, Bressan RA, Zhu JK.

Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):6058-6063. doi: 10.1073/pnas.1804774115. Epub 2018 May 21.

38.

CRISPR/Cas9-mediated gene targeting in Arabidopsis using sequential transformation.

Miki D, Zhang W, Zeng W, Feng Z, Zhu JK.

Nat Commun. 2018 May 17;9(1):1967. doi: 10.1038/s41467-018-04416-0.

39.

Multiplex gene editing in rice with simplified CRISPR-Cpf1 and CRISPR-Cas9 systems.

Wang M, Mao Y, Lu Y, Wang Z, Tao X, Zhu JK.

J Integr Plant Biol. 2018 Aug;60(8):626-631. doi: 10.1111/jipb.12667. Epub 2018 Jul 7.

PMID:
29762900
40.

MicroRNA-520d-3p inhibits osteosarcoma progression by degradation of Akt1.

He TD, Zhu JK, Wei ZX, Wang YM.

Eur Rev Med Pharmacol Sci. 2018 Apr;22(8):2315-2320. doi: 10.26355/eurrev_201804_14821.

41.

Reactive oxygen species signaling and stomatal movement in plant responses to drought stress and pathogen attack.

Qi J, Song CP, Wang B, Zhou J, Kangasjärvi J, Zhu JK, Gong Z.

J Integr Plant Biol. 2018 Sep;60(9):805-826. doi: 10.1111/jipb.12654. Epub 2018 Jul 3. Review.

PMID:
29660240
42.

EAR1 Negatively Regulates ABA Signaling by Enhancing 2C Protein Phosphatase Activity.

Wang K, He J, Zhao Y, Wu T, Zhou X, Ding Y, Kong L, Wang X, Wang Y, Li J, Song CP, Wang B, Yang S, Zhu JK, Gong Z.

Plant Cell. 2018 Apr;30(4):815-834. doi: 10.1105/tpc.17.00875. Epub 2018 Apr 4.

43.

EL1-like Casein Kinases Suppress ABA Signaling and Responses by Phosphorylating and Destabilizing the ABA Receptors PYR/PYLs in Arabidopsis.

Chen HH, Qu L, Xu ZH, Zhu JK, Xue HW.

Mol Plant. 2018 May 7;11(5):706-719. doi: 10.1016/j.molp.2018.02.012. Epub 2018 Mar 2.

44.

Precise A·T to G·C Base Editing in the Rice Genome.

Hua K, Tao X, Yuan F, Wang D, Zhu JK.

Mol Plant. 2018 Apr 2;11(4):627-630. doi: 10.1016/j.molp.2018.02.007. Epub 2018 Feb 21. No abstract available.

45.

A naturally occurring epiallele associates with leaf senescence and local climate adaptation in Arabidopsis accessions.

He L, Wu W, Zinta G, Yang L, Wang D, Liu R, Zhang H, Zheng Z, Huang H, Zhang Q, Zhu JK.

Nat Commun. 2018 Jan 31;9(1):460. doi: 10.1038/s41467-018-02839-3.

46.

Knockdown of Rice MicroRNA166 Confers Drought Resistance by Causing Leaf Rolling and Altering Stem Xylem Development.

Zhang J, Zhang H, Srivastava AK, Pan Y, Bai J, Fang J, Shi H, Zhu JK.

Plant Physiol. 2018 Mar;176(3):2082-2094. doi: 10.1104/pp.17.01432. Epub 2018 Jan 24.

47.

A virus-targeted plant receptor-like kinase promotes cell-to-cell spread of RNAi.

Rosas-Diaz T, Zhang D, Fan P, Wang L, Ding X, Jiang Y, Jimenez-Gongora T, Medina-Puche L, Zhao X, Feng Z, Zhang G, Liu X, Bejarano ER, Tan L, Zhang H, Zhu JK, Xing W, Faulkner C, Nagawa S, Lozano-Duran R.

Proc Natl Acad Sci U S A. 2018 Feb 6;115(6):1388-1393. doi: 10.1073/pnas.1715556115. Epub 2018 Jan 23.

48.

Interaction network of core ABA signaling components in maize.

Wang YG, Fu FL, Yu HQ, Hu T, Zhang YY, Tao Y, Zhu JK, Zhao Y, Li WC.

Plant Mol Biol. 2018 Feb;96(3):245-263. doi: 10.1007/s11103-017-0692-7. Epub 2018 Jan 17.

PMID:
29344831
49.

Reciprocal Regulation of the TOR Kinase and ABA Receptor Balances Plant Growth and Stress Response.

Wang P, Zhao Y, Li Z, Hsu CC, Liu X, Fu L, Hou YJ, Du Y, Xie S, Zhang C, Gao J, Cao M, Huang X, Zhu Y, Tang K, Wang X, Tao WA, Xiong Y, Zhu JK.

Mol Cell. 2018 Jan 4;69(1):100-112.e6. doi: 10.1016/j.molcel.2017.12.002. Epub 2017 Dec 28.

50.

An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress.

Zhu Y, Wang B, Tang K, Hsu CC, Xie S, Du H, Yang Y, Tao WA, Zhu JK.

PLoS Genet. 2017 Dec 12;13(12):e1007124. doi: 10.1371/journal.pgen.1007124. eCollection 2017 Dec.

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