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Items: 1 to 50 of 205

1.

Combined quantitation of HMGA2 mRNA, microRNAs, and mitochondrial-DNA content enables the identification and typing of thyroid tumors in fine-needle aspiration smears.

Titov SE, Ivanov MK, Demenkov PS, Katanyan GA, Kozorezova ES, Malek AV, Veryaskina YA, Zhimulev IF.

BMC Cancer. 2019 Oct 28;19(1):1010. doi: 10.1186/s12885-019-6154-7.

2.

Expression of micrornas in molecular genetic breast cancer subtypes.

Kolesnikov NN, Veryaskina YA, Titov SE, Rodionov VV, Gening TP, Abakumova TV, Kometova VV, Torosyan MK, Zhimulev IF.

Cancer Treat Res Commun. 2019;20:100026. doi: 10.1016/j.ctarc.2016.08.006. Epub 2016 Aug 20.

PMID:
31255253
3.

Architecture of Promoters of House-Keeping Genes in Polytene Chromosome Interbands of Drosophila melanogaster.

Zykova TY, Levitsky VG, Zhimulev IF.

Dokl Biochem Biophys. 2019 Mar;485(1):95-100. doi: 10.1134/S1607672919020029. Epub 2019 Jun 14.

PMID:
31201623
4.

Molecular and genetic organization of bands and interbands in the dot chromosome of Drosophila melanogaster.

Sidorenko DS, Sidorenko IA, Zykova TY, Goncharov FP, Larsson J, Zhimulev IF.

Chromosoma. 2019 Jun;128(2):97-117. doi: 10.1007/s00412-019-00703-x. Epub 2019 Apr 30.

5.

Gene dunce Localization in the Polytene Chromosome of Drosophila melanogaster Long Span Batch of Adjacent Chromosomal Structures.

Khoroshko VA, Pokholkova GV, Zykova TY, Osadchiy IS, Zhimulev IF.

Dokl Biochem Biophys. 2019 May;484(1):55-58. doi: 10.1134/S1607672919010137. Epub 2019 Apr 22.

PMID:
31012014
6.

Genetic Organization of Open Chromatin Domains Situated in Polytene Chromosome Interbands in Drosophila.

Zykova TY, Popova OO, Khoroshko VA, Levitsky VG, Lavrov SA, Zhimulev IF.

Dokl Biochem Biophys. 2018 Nov;483(1):297-301. doi: 10.1134/S1607672918060078.

PMID:
30607724
7.

New Haplotypes of the Mitochondrial Gene CytB in the Nesting Population of the Siberian Black Kite Milvus migrans lineatus Gray, 1831 in the Territory of the Republic of Tyva.

Andreyenkova NG, Andreyenkov OV, Karyakin IV, Zhimulev IF.

Dokl Biochem Biophys. 2018 Sep;482(1):242-244. doi: 10.1134/S1607672918050034. Epub 2018 Nov 5.

PMID:
30397883
8.

Border Structure of Intercalary Heterochromatin Bands of Drosophila melanogaster Polytene Chromosomes.

Khoroshko VA, Zykova TY, Popova OO, Zhimulev IF.

Dokl Biochem Biophys. 2018 Mar;479(1):114-117. doi: 10.1134/S1607672918020163. Epub 2018 May 19.

PMID:
29779112
9.

Similarity in replication timing between polytene and diploid cells is associated with the organization of the Drosophila genome.

Kolesnikova TD, Goncharov FP, Zhimulev IF.

PLoS One. 2018 Apr 16;13(4):e0195207. doi: 10.1371/journal.pone.0195207. eCollection 2018.

10.

Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing.

Pokholkova GV, Demakov SA, Andreenkov OV, Andreenkova NG, Volkova EI, Belyaeva ES, Zhimulev IF.

PLoS One. 2018 Apr 2;13(4):e0192634. doi: 10.1371/journal.pone.0192634. eCollection 2018.

11.

Polytene Chromosomes - A Portrait of Functional Organization of the Drosophila Genome.

Zykova TY, Levitsky VG, Belyaeva ES, Zhimulev IF.

Curr Genomics. 2018 Apr;19(3):179-191. doi: 10.2174/1389202918666171016123830. Review.

12.

Regulatory functions and chromatin loading dynamics of linker histone H1 during endoreplication in Drosophila.

Andreyeva EN, Bernardo TJ, Kolesnikova TD, Lu X, Yarinich LA, Bartholdy BA, Guo X, Posukh OV, Healton S, Willcockson MA, Pindyurin AV, Zhimulev IF, Skoultchi AI, Fyodorov DV.

Genes Dev. 2017 Mar 15;31(6):603-616. doi: 10.1101/gad.295717.116.

13.

Protein and Genetic Composition of Four Chromatin Types in Drosophila melanogaster Cell Lines.

Boldyreva LV, Goncharov FP, Demakova OV, Zykova TY, Levitsky VG, Kolesnikov NN, Pindyurin AV, Semeshin VF, Zhimulev IF.

Curr Genomics. 2017 Apr;18(2):214-226. doi: 10.2174/1389202917666160512164913.

14.

Targeted mutagenesis of Drosophila RNaseZ gene by homologous recombination.

Andreenkov OV, Volkova EI, Demakov SA, Xie X, Dubrovsky EB, Zhimulev IF.

Dokl Biochem Biophys. 2016 Nov;471(1):399-402. doi: 10.1134/S1607672916060065. Epub 2017 Jan 6.

PMID:
28058688
15.

Chromatin Heterogeneity and Distribution of Regulatory Elements in the Late-Replicating Intercalary Heterochromatin Domains of Drosophila melanogaster Chromosomes.

Khoroshko VA, Levitsky VG, Zykova TY, Antonenko OV, Belyaeva ES, Zhimulev IF.

PLoS One. 2016 Jun 14;11(6):e0157147. doi: 10.1371/journal.pone.0157147. eCollection 2016.

16.

Drosophila polytene chromosome bands formed by gene introns.

Zhimulev IF, Boldyreva LV, Demakova OV, Poholkova GV, Khoroshko VA, Zykova TY, Lavrov SA, Belyaeva ES.

Dokl Biochem Biophys. 2016;466:57-60. doi: 10.1134/S1607672916010178. Epub 2016 Mar 31.

PMID:
27025489
17.

miRNA profiling, detection of BRAF V600E mutation and RET-PTC1 translocation in patients from Novosibirsk oblast (Russia) with different types of thyroid tumors.

Titov SE, Ivanov MK, Karpinskaya EV, Tsivlikova EV, Shevchenko SP, Veryaskina YA, Akhmerova LG, Poloz TL, Klimova OA, Gulyaeva LF, Zhimulev IF, Kolesnikov NN.

BMC Cancer. 2016 Mar 9;16:201. doi: 10.1186/s12885-016-2240-2.

18.

COMPREHENSIVE APPROACH TO MAPPING LATE-REPLICATING BANDS IN POLYTHENE CHROMOSOMES OF DROSOPHILA MELANOGASTER.

Kolesnikova TD, Zhimulev IF.

Tsitologiia. 2016;58(4):262-6. English, Russian.

PMID:
30191691
19.

LOCALIZATION OF MOBILE P-ELEMENT INSERTIONS IN DOMAINS OF ACTIVE AND REPRESSED CHROMATIN IN DROSOPHILA MELANOGASTER’S GENOME.

Zykova TY, Demidova DS, Kokoza EB, Zhimulev IF.

Tsitologiia. 2016;58(4):258-61. English, Russian.

PMID:
30191690
20.

A COMBINED METHOD FOR MAPPING POLYTHENE CHROMOSOMES ON THE EXAMPLE OF THE FOURTH MICROCHROMOSOME OF DROSOPHILA MELANOGASTER.

Demidova DS, Demakov SA, Pokholkova GV, Zykova TY, Zhimulev IF.

Tsitologiia. 2016;58(4):253-7. English, Russian.

PMID:
30191689
21.

CHARACTERISTIC OF THE CHROMATIN TYPE CORRESPONDING TO THIN «GREY» BANDS IN POLYTHENE CHROMOSOMES OF DROSOPHILA MELANOGASTER.

Demakova OV, Boldyreva LV, Demakov SA, Goncharov FP, Antonenko OV, Zhimulev IF.

Tsitologiia. 2016;58(4):248-52. English, Russian.

PMID:
30191688
22.

Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in Drosophila melanogaster.

Chereji RV, Kan TW, Grudniewska MK, Romashchenko AV, Berezikov E, Zhimulev IF, Guryev V, Morozov AV, Moshkin YM.

Nucleic Acids Res. 2016 Feb 18;44(3):1036-51. doi: 10.1093/nar/gkv978. Epub 2015 Oct 1.

23.

The Release 6 reference sequence of the Drosophila melanogaster genome.

Hoskins RA, Carlson JW, Wan KH, Park S, Mendez I, Galle SE, Booth BW, Pfeiffer BD, George RA, Svirskas R, Krzywinski M, Schein J, Accardo MC, Damia E, Messina G, Méndez-Lago M, de Pablos B, Demakova OV, Andreyeva EN, Boldyreva LV, Marra M, Carvalho AB, Dimitri P, Villasante A, Zhimulev IF, Rubin GM, Karpen GH, Celniker SE.

Genome Res. 2015 Mar;25(3):445-58. doi: 10.1101/gr.185579.114. Epub 2015 Jan 14.

24.

DNA copy-number control through inhibition of replication fork progression.

Nordman JT, Kozhevnikova EN, Verrijzer CP, Pindyurin AV, Andreyeva EN, Shloma VV, Zhimulev IF, Orr-Weaver TL.

Cell Rep. 2014 Nov 6;9(3):841-9. doi: 10.1016/j.celrep.2014.10.005. Epub 2014 Oct 30.

25.

Tethering of SUUR and HP1 proteins results in delayed replication of euchromatic regions in Drosophila melanogaster polytene chromosomes.

Pokholkova GV, Koryakov DE, Pindyurin AV, Kozhevnikova EN, Belyakin SN, Andreyenkov OV, Belyaeva ES, Zhimulev IF.

Chromosoma. 2015 Jun;124(2):209-20. doi: 10.1007/s00412-014-0491-8. Epub 2014 Nov 16.

PMID:
25398563
26.

DNA replication in nurse cell polytene chromosomes of Drosophila melanogaster otu mutants.

Koryakov DE, Zhimulev IF.

Chromosoma. 2015 Mar;124(1):95-106. doi: 10.1007/s00412-014-0487-4. Epub 2014 Sep 26.

PMID:
25256561
27.

Genetic organization of interphase chromosome bands and interbands in Drosophila melanogaster.

Zhimulev IF, Zykova TY, Goncharov FP, Khoroshko VA, Demakova OV, Semeshin VF, Pokholkova GV, Boldyreva LV, Demidova DS, Babenko VN, Demakov SA, Belyaeva ES.

PLoS One. 2014 Jul 29;9(7):e101631. doi: 10.1371/journal.pone.0101631. eCollection 2014.

28.

Late replication domains are evolutionary conserved in the Drosophila genome.

Andreyenkova NG, Kolesnikova TD, Makunin IV, Pokholkova GV, Boldyreva LV, Zykova TY, Zhimulev IF, Belyaeva ES.

PLoS One. 2013 Dec 31;8(12):e83319. doi: 10.1371/journal.pone.0083319. eCollection 2013.

29.

[Late-replicating regions in salivary gland polytene chromosomes of Drosophila melanogaster].

Kolesnikov TD, Andreenkova NG, Beliaeva ES, Goncharov FP, Zykova TIu, Boldyreva LV, Pokholkova gV, Zhimulev IF.

Tsitologiia. 2013;55(3):178-80. Russian.

PMID:
23795461
30.

[Microrna, evolution and cancer].

Kolesnikov NN, Titov SE, Veriaskina IuA, Karpinskaia EV, Shevchenko SP, Akhmerova LG, Ivanov MK, Kozlov VV, Elisaphenko EA, Guliaeva LF, Zhimulev IF.

Tsitologiia. 2013;55(3):159-64. Russian.

PMID:
23795457
31.

[Cytophotometric determination of genome size in two species of Cyclops Lake Baikal (Crustacea: Copepoda: Cyclopoina) in ontogenetic development].

Ivankina EA, Alekseeva AL, Omel'ianchuk LV, Pal'chikova IG, sheveleva NG, Kiril'chik SV, Zhimulev IF.

Tsitologiia. 2013;55(1):52-9. Russian.

PMID:
23662579
32.

Drosophila SUUR protein associates with PCNA and binds chromatin in a cell cycle-dependent manner.

Kolesnikova TD, Posukh OV, Andreyeva EN, Bebyakina DS, Ivankin AV, Zhimulev IF.

Chromosoma. 2013 Mar;122(1-2):55-66. doi: 10.1007/s00412-012-0390-9. Epub 2012 Nov 13.

PMID:
23149855
33.

Induced transcription results in local changes in chromatin structure, replication timing, and DNA polytenization in a site of intercalary heterochromatin.

Koryakov DE, Pokholkova GV, Maksimov DA, Belyakin SN, Belyaeva ES, Zhimulev IF.

Chromosoma. 2012 Dec;121(6):573-83. doi: 10.1007/s00412-012-0382-9. Epub 2012 Sep 27.

PMID:
23015267
34.

Banding patterns in Drosophila melanogaster polytene chromosomes correlate with DNA-binding protein occupancy.

Zhimulev IF, Belyaeva ES, Vatolina TY, Demakov SA.

Bioessays. 2012 Jun;34(6):498-508. doi: 10.1002/bies.201100142. Epub 2012 Mar 15. Review.

PMID:
22419120
35.

Late replication domains in polytene and non-polytene cells of Drosophila melanogaster.

Belyaeva ES, Goncharov FP, Demakova OV, Kolesnikova TD, Boldyreva LV, Semeshin VF, Zhimulev IF.

PLoS One. 2012;7(1):e30035. doi: 10.1371/journal.pone.0030035. Epub 2012 Jan 10.

36.

Protein composition of interband regions in polytene and cell line chromosomes of Drosophila melanogaster.

Demakov SA, Vatolina TY, Babenko VN, Semeshin VF, Belyaeva ES, Zhimulev IF.

BMC Genomics. 2011 Nov 18;12:566. doi: 10.1186/1471-2164-12-566.

37.

Identical functional organization of nonpolytene and polytene chromosomes in Drosophila melanogaster.

Vatolina TY, Boldyreva LV, Demakova OV, Demakov SA, Kokoza EB, Semeshin VF, Babenko VN, Goncharov FP, Belyaeva ES, Zhimulev IF.

PLoS One. 2011;6(10):e25960. doi: 10.1371/journal.pone.0025960. Epub 2011 Oct 11. Erratum in: PLoS One. 2011;6(11). doi:10.1371/annotation/45b44e2a-c751-418b-bbb7-7023998abdfc.

38.
39.

[Identification and molecular genetic characterization of the polytene chromosome interbands in Drosophila melanogaster].

Vatolina TIu, Demakov SA, Semeshin VF, Makunin IV, Babenko VN, Beliaeva ES, Zhimulev IF.

Genetika. 2011 May;47(5):597-609. Russian.

PMID:
21786665
40.

Induced decondensation of heterochromatin in Drosophila melanogaster polytene chromosomes under condition of ectopic expression of the Supressor of underreplication gene.

Kolesnikova TD, Semeshin VF, Andreyeva EN, Zykov IA, Kokoza EB, Kalashnikova DA, Belyaeva ES, Zhimulev IF.

Fly (Austin). 2011 Jul-Sep;5(3):181-90. Epub 2011 Jul 1.

PMID:
21747232
41.

The role of the Suppressor of Hairy-wing insulator protein in Drosophila oogenesis.

Baxley RM, Soshnev AA, Koryakov DE, Zhimulev IF, Geyer PK.

Dev Biol. 2011 Aug 15;356(2):398-410. doi: 10.1016/j.ydbio.2011.05.666. Epub 2011 May 30.

42.

[DNA contents in nuclei of Cyclops kolensis and C. insignis (Crustacea, Copepoda)].

Semeshin VF, Omel'ianchuk LV, Alekseeva AL, Ivankina EA, Sheveleva NG, Zhimulev IF.

Tsitologiia. 2011;53(3):285-9. Russian.

PMID:
21598692
43.

[Molecular combing method in the research of DNA replication parameters in isolated organs of Drosophyla melanogaster].

Ivankin AV, Kolesnikova TD, Demakov SA, Andreenkov OV, Bil'danova ER, Andreenkova NG, Zhimulev IF.

Tsitologiia. 2011;53(1):75-82. Russian.

PMID:
21473123
44.

The SUUR protein is involved in binding of SU(VAR)3-9 and methylation of H3K9 and H3K27 in chromosomes of Drosophila melanogaster.

Koryakov DE, Walther M, Ebert A, Lein S, Zhimulev IF, Reuter G.

Chromosome Res. 2011 Feb;19(2):235-49. doi: 10.1007/s10577-011-9193-8. Epub 2011 Feb 22.

PMID:
21340745
45.

[Functional organization of interbands in Drosophila polytene chromosomes].

Demakov SA, Andreenkov OV, Berkaeva MB, Vatolina TIu, Volkova EI, Kvon EZ, Semeshin VF, Zhimulev IF.

Genetika. 2010 Oct;46(10):1421-3. Review. Russian.

PMID:
21254569
46.

[Molecular combing in studies of the genome organization and DNA replication].

Kolesnikova TD, Demakov SA, Ivankin AV, Zhimulev IF.

Genetika. 2010 Oct;46(10):1409-12. Russian.

PMID:
21254567
47.

[Intercalary heterochromatin in the genome of Drosophila].

Zhimulev IF, Beliaeva ES, Andreeva EN, Andreenkova NG, Babenko VN, Beliakin SN, Boldyreva LV, Brusentsova IV, Demakov SA, Zykov IA, Kokoza EB, Kolesnikova TD, Maksimov DA, Makulin IV, Pindiurin AV, Semeshin VF, Khoroshko VA.

Genetika. 2010 Oct;46(10):1405-8. Russian.

PMID:
21254566
48.

Genome-wide profiling of forum domains in Drosophila melanogaster.

Tchurikov NA, Kretova OV, Sosin DV, Zykov IA, Zhimulev IF, Kravatsky YV.

Nucleic Acids Res. 2011 May;39(9):3667-85. doi: 10.1093/nar/gkq1353. Epub 2011 Jan 18.

49.

[Conference "Chromosome 2009"].

Zhimulev IF, Grafodatskiĭ AS.

Genetika. 2010 Sep;46(9):1157-8. Russian. No abstract available.

PMID:
21117344
50.

[Phylogenetic analysis of the rapidly evolving SuUR gene in insects].

Iurlova AA, Makunin IV, Zhimulev IF.

Genetika. 2010 Sep;46(9):1272-5. Russian.

PMID:
21061633

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