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Items: 40

1.

Divergent Functional Diversification Patterns in the SEP/AGL6/AP1 MADS-box Transcription Factor Superclade.

Morel P, Chambrier P, Boltz V, Chamot S, Rozier F, Rodrigues Bento S, Trehin C, Monniaux M, Zethof J, Vandenbussche M.

Plant Cell. 2019 Oct 7. pii: tpc.00162.2019. doi: 10.1105/tpc.19.00162. [Epub ahead of print]

2.

Fgf8a mutation affects craniofacial development and skeletal gene expression in zebrafish larvae.

Gebuijs IGE, Raterman ST, Metz JR, Swanenberg L, Zethof J, Van den Bos R, Carels CEL, Wagener FADTG, Von den Hoff JW.

Biol Open. 2019 Sep 9;8(9). pii: bio039834. doi: 10.1242/bio.039834.

3.

Early life exposure to cortisol in zebrafish (Danio rerio): similarities and differences in behaviour and physiology between larvae of the AB and TL strains.

van den Bos R, Althuizen J, Tschigg K, Bomert M, Zethof J, Filk G, Gorissen M.

Behav Pharmacol. 2019 Apr;30(2 and 3-Spec Issue):260-271. doi: 10.1097/FBP.0000000000000470.

PMID:
30724799
4.

The enhancing effect of afforestation over secondary succession on soil quality under semiarid climate conditions.

Zethof JHT, Cammeraat ELH, Nadal-Romero E.

Sci Total Environ. 2019 Feb 20;652:1090-1101. doi: 10.1016/j.scitotenv.2018.10.235. Epub 2018 Oct 21.

PMID:
30586796
5.

Allostatic Load and Stress Physiology in European Seabass (Dicentrarchus labrax L.) and Gilthead Seabream (Sparus aurata L.).

Samaras A, Espírito Santo C, Papandroulakis N, Mitrizakis N, Pavlidis M, Höglund E, Pelgrim TNM, Zethof J, Spanings FAT, Vindas MA, Ebbesson LOE, Flik G, Gorissen M.

Front Endocrinol (Lausanne). 2018 Aug 13;9:451. doi: 10.3389/fendo.2018.00451. eCollection 2018.

6.
7.

Divergence of the Floral A-Function between an Asterid and a Rosid Species.

Morel P, Heijmans K, Rozier F, Zethof J, Chamot S, Bento SR, Vialette-Guiraud A, Chambrier P, Trehin C, Vandenbussche M.

Plant Cell. 2017 Jul;29(7):1605-1621. doi: 10.1105/tpc.17.00098. Epub 2017 Jun 23.

8.

Further characterisation of differences between TL and AB zebrafish (Danio rerio): Gene expression, physiology and behaviour at day 5 of the larval stage.

van den Bos R, Mes W, Galligani P, Heil A, Zethof J, Flik G, Gorissen M.

PLoS One. 2017 Apr 18;12(4):e0175420. doi: 10.1371/journal.pone.0175420. eCollection 2017.

9.

Uptake of benzo[a]pyrene, but not of phenanthrene, is inhibited by fatty acids in intestinal brush border membrane vesicles of rainbow trout (Oncorhynchus mykiss).

de Gelder S, van Och L, Zethof J, Pelgrim TN, Rasinger JD, Flik G, Berntssen MH, Klaren PH.

Comp Biochem Physiol C Toxicol Pharmacol. 2017 May;195:1-8. doi: 10.1016/j.cbpc.2017.02.003. Epub 2017 Feb 12.

PMID:
28216010
10.

Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida.

Bombarely A, Moser M, Amrad A, Bao M, Bapaume L, Barry CS, Bliek M, Boersma MR, Borghi L, Bruggmann R, Bucher M, D'Agostino N, Davies K, Druege U, Dudareva N, Egea-Cortines M, Delledonne M, Fernandez-Pozo N, Franken P, Grandont L, Heslop-Harrison JS, Hintzsche J, Johns M, Koes R, Lv X, Lyons E, Malla D, Martinoia E, Mattson NS, Morel P, Mueller LA, Muhlemann J, Nouri E, Passeri V, Pezzotti M, Qi Q, Reinhardt D, Rich M, Richert-Pöggeler KR, Robbins TP, Schatz MC, Schranz ME, Schuurink RC, Schwarzacher T, Spelt K, Tang H, Urbanus SL, Vandenbussche M, Vijverberg K, Villarino GH, Warner RM, Weiss J, Yue Z, Zethof J, Quattrocchio F, Sims TL, Kuhlemeier C.

Nat Plants. 2016 May 27;2(6):16074. doi: 10.1038/nplants.2016.74.

11.

Patent Ductus Arteriosus and Brain Volume.

Lemmers PM, Benders MJ, D'Ascenzo R, Zethof J, Alderliesten T, Kersbergen KJ, Isgum I, de Vries LS, Groenendaal F, van Bel F.

Pediatrics. 2016 Apr;137(4). pii: e20153090. doi: 10.1542/peds.2015-3090. Epub 2016 Mar 30.

12.

Providing a food reward reduces inhibitory avoidance learning in zebrafish.

Manuel R, Zethof J, Flik G, van den Bos R.

Behav Processes. 2015 Nov;120:69-72. doi: 10.1016/j.beproc.2015.08.013. Epub 2015 Sep 2.

PMID:
26342856
13.

Differences in inhibitory avoidance, cortisol and brain gene expression in TL and AB zebrafish.

Gorissen M, Manuel R, Pelgrim TN, Mes W, de Wolf MJ, Zethof J, Flik G, van den Bos R.

Genes Brain Behav. 2015 Jun;14(5):428-38. doi: 10.1111/gbb.12220. Epub 2015 May 21.

14.

The effects of environmental enrichment and age-related differences on inhibitory avoidance in zebrafish (Danio rerio Hamilton).

Manuel R, Gorissen M, Stokkermans M, Zethof J, Ebbesson LO, van de Vis H, Flik G, van den Bos R.

Zebrafish. 2015 Apr;12(2):152-65. doi: 10.1089/zeb.2014.1045. Epub 2015 Feb 3.

PMID:
25646635
15.

Identification of novel osteogenic compounds by an ex-vivo sp7:luciferase zebrafish scale assay.

de Vrieze E, Zethof J, Schulte-Merker S, Flik G, Metz JR.

Bone. 2015 May;74:106-13. doi: 10.1016/j.bone.2015.01.006. Epub 2015 Jan 16.

PMID:
25600250
16.

Unpredictable chronic stress decreases inhibitory avoidance learning in Tuebingen long-fin zebrafish: stronger effects in the resting phase than in the active phase.

Manuel R, Gorissen M, Zethof J, Ebbesson LO, van de Vis H, Flik G, van den Bos R.

J Exp Biol. 2014 Nov 1;217(Pt 21):3919-28. doi: 10.1242/jeb.109736. Epub 2014 Sep 29.

17.

Inhibitory avoidance learning in zebrafish (Danio rerio): effects of shock intensity and unraveling differences in task performance.

Manuel R, Gorissen M, Roca CP, Zethof J, van de Vis H, Flik G, van den Bos R.

Zebrafish. 2014 Aug;11(4):341-52. doi: 10.1089/zeb.2013.0970. Epub 2014 Jul 8.

18.

Knockdown of monocarboxylate transporter 8 (mct8) disturbs brain development and locomotion in zebrafish.

de Vrieze E, van de Wiel SM, Zethof J, Flik G, Klaren PH, Arjona FJ.

Endocrinology. 2014 Jun;155(6):2320-30. doi: 10.1210/en.2013-1962. Epub 2014 Apr 2.

PMID:
24693966
19.

Effects of Pro-Tex on zebrafish (Danio rerio) larvae, adult common carp (Cyprinus carpio) and adult yellowtail kingfish (Seriola lalandi).

Boerrigter JG, van de Vis HW, van den Bos R, Abbink W, Spanings T, Zethof J, Martinez LL, van Andel WF, Lopez-Luna J, Flik G.

Fish Physiol Biochem. 2014 Aug;40(4):1201-12. doi: 10.1007/s10695-014-9916-9. Epub 2014 Feb 4.

PMID:
24493298
20.

Massive indexed parallel identification of transposon flanking sequences.

Vandenbussche M, Zethof J, Gerats T.

Methods Mol Biol. 2013;1057:251-64. doi: 10.1007/978-1-62703-568-2_18.

PMID:
23918434
21.

Transposon display: a versatile method for transposon tagging.

Vandenbussche M, Zethof J, Gerats T.

Methods Mol Biol. 2013;1057:239-50. doi: 10.1007/978-1-62703-568-2_17.

PMID:
23918433
22.

Identification and applications of the Petunia class II Act1/dTph1 transposable element system.

Gerats T, Zethof J, Vandenbussche M.

Methods Mol Biol. 2013;1057:223-37. doi: 10.1007/978-1-62703-568-2_16.

PMID:
23918432
23.

Genomic analysis of the native European Solanum species, S. dulcamara.

D'Agostino N, Golas T, van de Geest H, Bombarely A, Dawood T, Zethof J, Driedonks N, Wijnker E, Bargsten J, Nap JP, Mariani C, Rieu I.

BMC Genomics. 2013 May 28;14:356. doi: 10.1186/1471-2164-14-356.

24.

Redefining C and D in the petunia ABC.

Heijmans K, Ament K, Rijpkema AS, Zethof J, Wolters-Arts M, Gerats T, Vandenbussche M.

Plant Cell. 2012 Jun;24(6):2305-17. doi: 10.1105/tpc.112.097030. Epub 2012 Jun 15.

25.

Revealing impaired pathways in the an11 mutant by high-throughput characterization of Petunia axillaris and Petunia inflata transcriptomes.

Zenoni S, D'Agostino N, Tornielli GB, Quattrocchio F, Chiusano ML, Koes R, Zethof J, Guzzo F, Delledonne M, Frusciante L, Gerats T, Pezzotti M.

Plant J. 2011 Oct;68(1):11-27. doi: 10.1111/j.1365-313X.2011.04661.x. Epub 2011 Jul 14.

26.

Differential recruitment of WOX transcription factors for lateral development and organ fusion in Petunia and Arabidopsis.

Vandenbussche M, Horstman A, Zethof J, Koes R, Rijpkema AS, Gerats T.

Plant Cell. 2009 Aug;21(8):2269-83. doi: 10.1105/tpc.109.065862. Epub 2009 Aug 28.

27.

The petunia AGL6 gene has a SEPALLATA-like function in floral patterning.

Rijpkema AS, Zethof J, Gerats T, Vandenbussche M.

Plant J. 2009 Oct;60(1):1-9. doi: 10.1111/j.1365-313X.2009.03917.x. Epub 2009 May 12.

28.

Generation of a 3D indexed Petunia insertion database for reverse genetics.

Vandenbussche M, Janssen A, Zethof J, van Orsouw N, Peters J, van Eijk MJ, Rijpkema AS, Schneiders H, Santhanam P, de Been M, van Tunen A, Gerats T.

Plant J. 2008 Jun;54(6):1105-14. doi: 10.1111/j.1365-313X.2008.03482.x. Epub 2008 Mar 13.

29.

Transposon Display identifies individual transposable elements in high copy number lines.

Van den Broeck D, Maes T, Sauer M, Zethof J, De Keukeleire P, D'hauw M, Van Montagu M, Gerats T.

Plant J. 1998 Jan;13(1):121-9.

30.

A conserved microRNA module exerts homeotic control over Petunia hybrida and Antirrhinum majus floral organ identity.

Cartolano M, Castillo R, Efremova N, Kuckenberg M, Zethof J, Gerats T, Schwarz-Sommer Z, Vandenbussche M.

Nat Genet. 2007 Jul;39(7):901-5. Epub 2007 Jun 24.

PMID:
17589508
31.

Analysis of the Petunia TM6 MADS box gene reveals functional divergence within the DEF/AP3 lineage.

Rijpkema AS, Royaert S, Zethof J, van der Weerden G, Gerats T, Vandenbussche M.

Plant Cell. 2006 Aug;18(8):1819-32. Epub 2006 Jul 14.

32.

Quantitative trait locus (QTL) isogenic recombinant analysis: a method for high-resolution mapping of QTL within a single population.

Peleman JD, Wye C, Zethof J, Sørensen AP, Verbakel H, van Oeveren J, Gerats T, van der Voort JR.

Genetics. 2005 Nov;171(3):1341-52. Epub 2005 Aug 5.

33.

The duplicated B-class heterodimer model: whorl-specific effects and complex genetic interactions in Petunia hybrida flower development.

Vandenbussche M, Zethof J, Royaert S, Weterings K, Gerats T.

Plant Cell. 2004 Mar;16(3):741-54. Epub 2004 Feb 18.

34.

Toward the analysis of the petunia MADS box gene family by reverse and forward transposon insertion mutagenesis approaches: B, C, and D floral organ identity functions require SEPALLATA-like MADS box genes in petunia.

Vandenbussche M, Zethof J, Souer E, Koes R, Tornielli GB, Pezzotti M, Ferrario S, Angenent GC, Gerats T.

Plant Cell. 2003 Nov;15(11):2680-93. Epub 2003 Oct 23.

35.

An AFLP-based genome-wide mapping strategy.

Peters JL, Cnops G, Neyt P, Zethof J, Cornelis K, Van Lijsebettens M, Gerats T.

Theor Appl Genet. 2004 Jan;108(2):321-7. Epub 2003 Sep 16.

PMID:
13679979
36.

AFLP maps of Petunia hybrida: building maps when markers cluster.

Strommer J, Peters J, Zethof J, De Keukeleire P, Gerats T.

Theor Appl Genet. 2002 Nov;105(6-7):1000-1009. Epub 2002 Aug 6.

PMID:
12582927
37.

A physical amplified fragment-length polymorphism map of Arabidopsis.

Peters JL, Constandt H, Neyt P, Cnops G, Zethof J, Zabeau M, Gerats T.

Plant Physiol. 2001 Dec;127(4):1579-89.

38.

Analysis by Transposon Display of the behavior of the dTph1 element family during ontogeny and inbreeding of Petunia hybrida.

De Keukeleire P, Maes T, Sauer M, Zethof J, Van Montagu M, Gerats T.

Mol Genet Genomics. 2001 Mar;265(1):72-81.

PMID:
11370875
39.

Petunia Ap2-like genes and their role in flower and seed development.

Maes T, Van de Steene N, Zethof J, Karimi M, D'Hauw M, Mares G, Van Montagu M, Gerats T.

Plant Cell. 2001 Feb;13(2):229-44.

40.

Transcriptional and post-transcriptional regulation of chloroplast gene expression in Petunia hybrida.

van Grinsven MQ, Gielen JJ, Zethof JL, Nijkamp HJ, Kool AJ.

Theor Appl Genet. 1986 Nov;73(1):94-101. doi: 10.1007/BF00273725.

PMID:
24240754

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