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Items: 39

1.

Kinetochore-associated Stu2 promotes chromosome biorientation in vivo.

Miller MP, Evans RK, Zelter A, Geyer EA, MacCoss MJ, Rice LM, Davis TN, Asbury CL, Biggins S.

PLoS Genet. 2019 Oct 4;15(10):e1008423. doi: 10.1371/journal.pgen.1008423. eCollection 2019 Oct.

2.

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study.

Iacobucci C, Piotrowski C, Aebersold R, Amaral BC, Andrews P, Bernfur K, Borchers C, Brodie NI, Bruce JE, Cao Y, Chaignepain S, Chavez JD, Claverol S, Cox J, Davis T, Degliesposti G, Dong MQ, Edinger N, Emanuelsson C, Gay M, Götze M, Gomes-Neto F, Gozzo FC, Gutierrez C, Haupt C, Heck AJR, Herzog F, Huang L, Hoopmann MR, Kalisman N, Klykov O, Kukačka Z, Liu F, MacCoss MJ, Mechtler K, Mesika R, Moritz RL, Nagaraj N, Nesati V, Neves-Ferreira AGC, Ninnis R, Novák P, O'Reilly FJ, Pelzing M, Petrotchenko E, Piersimoni L, Plasencia M, Pukala T, Rand KD, Rappsilber J, Reichmann D, Sailer C, Sarnowski CP, Scheltema RA, Schmidt C, Schriemer DC, Shi Y, Skehel JM, Slavin M, Sobott F, Solis-Mezarino V, Stephanowitz H, Stengel F, Stieger CE, Trabjerg E, Trnka M, Vilaseca M, Viner R, Xiang Y, Yilmaz S, Zelter A, Ziemianowicz D, Leitner A, Sinz A.

Anal Chem. 2019 Jun 4;91(11):6953-6961. doi: 10.1021/acs.analchem.9b00658. Epub 2019 May 22.

3.

Proxl (Protein Cross-Linking Database): A Public Server, QC Tools, and Other Major Updates.

Riffle M, Jaschob D, Zelter A, Davis TN.

J Proteome Res. 2019 Feb 1;18(2):759-764. doi: 10.1021/acs.jproteome.8b00726. Epub 2018 Dec 19.

PMID:
30525651
4.

A Bifunctional Role for the UHRF1 UBL Domain in the Control of Hemi-methylated DNA-Dependent Histone Ubiquitylation.

DaRosa PA, Harrison JS, Zelter A, Davis TN, Brzovic P, Kuhlman B, Klevit RE.

Mol Cell. 2018 Nov 15;72(4):753-765.e6. doi: 10.1016/j.molcel.2018.09.029. Epub 2018 Nov 1.

5.

Novel phosphorylation states of the yeast spindle pole body.

Fong KK, Zelter A, Graczyk B, Hoyt JM, Riffle M, Johnson R, MacCoss MJ, Davis TN.

Biol Open. 2018 Oct 8;7(10). pii: bio033647. doi: 10.1242/bio.033647.

6.

Human Ska complex and Ndc80 complex interact to form a load-bearing assembly that strengthens kinetochore-microtubule attachments.

Helgeson LA, Zelter A, Riffle M, MacCoss MJ, Asbury CL, Davis TN.

Proc Natl Acad Sci U S A. 2018 Mar 13;115(11):2740-2745. doi: 10.1073/pnas.1718553115. Epub 2018 Feb 27.

7.

CYP26C1 Is a Hydroxylase of Multiple Active Retinoids and Interacts with Cellular Retinoic Acid Binding Proteins.

Zhong G, Ortiz D, Zelter A, Nath A, Isoherranen N.

Mol Pharmacol. 2018 May;93(5):489-503. doi: 10.1124/mol.117.111039. Epub 2018 Feb 23.

8.

Identification of Wiskott-Aldrich syndrome protein (WASP) binding sites on the branched actin filament nucleator Arp2/3 complex.

Luan Q, Zelter A, MacCoss MJ, Davis TN, Nolen BJ.

Proc Natl Acad Sci U S A. 2018 Feb 13;115(7):E1409-E1418. doi: 10.1073/pnas.1716622115. Epub 2018 Jan 31.

9.

The Ndc80 complex bridges two Dam1 complex rings.

Kim JO, Zelter A, Umbreit NT, Bollozos A, Riffle M, Johnson R, MacCoss MJ, Asbury CL, Davis TN.

Elife. 2017 Feb 13;6. pii: e21069. doi: 10.7554/eLife.21069.

10.

Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer.

Berger S, Procko E, Margineantu D, Lee EF, Shen BW, Zelter A, Silva DA, Chawla K, Herold MJ, Garnier JM, Johnson R, MacCoss MJ, Lessene G, Davis TN, Stayton PS, Stoddard BL, Fairlie WD, Hockenbery DM, Baker D.

Elife. 2016 Nov 2;5. pii: e20352. doi: 10.7554/eLife.20352.

11.

Direct protein-protein interactions and substrate channeling between cellular retinoic acid binding proteins and CYP26B1.

Nelson CH, Peng CC, Lutz JD, Yeung CK, Zelter A, Isoherranen N.

FEBS Lett. 2016 Aug;590(16):2527-35. doi: 10.1002/1873-3468.12303. Epub 2016 Jul 28.

12.

ProXL (Protein Cross-Linking Database): A Platform for Analysis, Visualization, and Sharing of Protein Cross-Linking Mass Spectrometry Data.

Riffle M, Jaschob D, Zelter A, Davis TN.

J Proteome Res. 2016 Aug 5;15(8):2863-70. doi: 10.1021/acs.jproteome.6b00274. Epub 2016 Jun 24.

13.

Higher-order oligomerization of Spc110p drives γ-tubulin ring complex assembly.

Lyon AS, Morin G, Moritz M, Yabut KC, Vojnar T, Zelter A, Muller E, Davis TN, Agard DA.

Mol Biol Cell. 2016 Jul 15;27(14):2245-58. doi: 10.1091/mbc.E16-02-0072. Epub 2016 May 25.

14.

Structure of γ-tubulin small complex based on a cryo-EM map, chemical cross-links, and a remotely related structure.

Greenberg CH, Kollman J, Zelter A, Johnson R, MacCoss MJ, Davis TN, Agard DA, Sali A.

J Struct Biol. 2016 Jun;194(3):303-10. doi: 10.1016/j.jsb.2016.03.006. Epub 2016 Mar 8.

15.

Identification of Tazarotenic Acid as the First Xenobiotic Substrate of Human Retinoic Acid Hydroxylase CYP26A1 and CYP26B1.

Foti RS, Isoherranen N, Zelter A, Dickmann LJ, Buttrick BR, Diaz P, Douguet D.

J Pharmacol Exp Ther. 2016 May;357(2):281-92. doi: 10.1124/jpet.116.232637. Epub 2016 Mar 2.

16.

The molecular architecture of the Dam1 kinetochore complex is defined by cross-linking based structural modelling.

Zelter A, Bonomi M, Kim JO, Umbreit NT, Hoopmann MR, Johnson R, Riffle M, Jaschob D, MacCoss MJ, Moritz RL, Davis TN.

Nat Commun. 2015 Nov 12;6:8673. doi: 10.1038/ncomms9673.

17.

Regulation of outer kinetochore Ndc80 complex-based microtubule attachments by the central kinetochore Mis12/MIND complex.

Kudalkar EM, Scarborough EA, Umbreit NT, Zelter A, Gestaut DR, Riffle M, Johnson RS, MacCoss MJ, Asbury CL, Davis TN.

Proc Natl Acad Sci U S A. 2015 Oct 13;112(41):E5583-9. doi: 10.1073/pnas.1513882112. Epub 2015 Oct 1.

18.

Kojak: efficient analysis of chemically cross-linked protein complexes.

Hoopmann MR, Zelter A, Johnson RS, Riffle M, MacCoss MJ, Davis TN, Moritz RL.

J Proteome Res. 2015 May 1;14(5):2190-8. doi: 10.1021/pr501321h. Epub 2015 Apr 15.

19.

Ring closure activates yeast γTuRC for species-specific microtubule nucleation.

Kollman JM, Greenberg CH, Li S, Moritz M, Zelter A, Fong KK, Fernandez JJ, Sali A, Kilmartin J, Davis TN, Agard DA.

Nat Struct Mol Biol. 2015 Feb;22(2):132-7. doi: 10.1038/nsmb.2953. Epub 2015 Jan 19.

20.

Kinetochore biorientation in Saccharomyces cerevisiae requires a tightly folded conformation of the Ndc80 complex.

Tien JF, Umbreit NT, Zelter A, Riffle M, Hoopmann MR, Johnson RS, Fonslow BR, Yates JR 3rd, MacCoss MJ, Moritz RL, Asbury CL, Davis TN.

Genetics. 2014 Dec;198(4):1483-93. doi: 10.1534/genetics.114.167775. Epub 2014 Sep 16.

21.

Coupling unbiased mutagenesis to high-throughput DNA sequencing uncovers functional domains in the Ndc80 kinetochore protein of Saccharomyces cerevisiae.

Tien JF, Fong KK, Umbreit NT, Payen C, Zelter A, Asbury CL, Dunham MJ, Davis TN.

Genetics. 2013 Sep;195(1):159-70. doi: 10.1534/genetics.113.152728. Epub 2013 Jul 5.

22.

Comparison of the function and expression of CYP26A1 and CYP26B1, the two retinoic acid hydroxylases.

Topletz AR, Thatcher JE, Zelter A, Lutz JD, Tay S, Nelson WL, Isoherranen N.

Biochem Pharmacol. 2012 Jan 1;83(1):149-63. doi: 10.1016/j.bcp.2011.10.007. Epub 2011 Oct 14.

23.

Fundic gland polyps and association with proton pump inhibitor intake: a prospective study in 1,780 endoscopies.

Zelter A, Fernández JL, Bilder C, Rodríguez P, Wonaga A, Dorado F, Galich M, Viola LA.

Dig Dis Sci. 2011 Jun;56(6):1743-8. doi: 10.1007/s10620-010-1493-x. Epub 2010 Dec 3.

PMID:
21127978
24.

Microtubule nucleating gamma-TuSC assembles structures with 13-fold microtubule-like symmetry.

Kollman JM, Polka JK, Zelter A, Davis TN, Agard DA.

Nature. 2010 Aug 12;466(7308):879-82. doi: 10.1038/nature09207. Epub 2010 Jul 14.

25.

The relative importance of CYP26A1 in hepatic clearance of all-trans retinoic acid.

Thatcher JE, Zelter A, Isoherranen N.

Biochem Pharmacol. 2010 Sep 15;80(6):903-12. doi: 10.1016/j.bcp.2010.05.023. Epub 2010 May 31.

26.
27.

Localization and orientation of the gamma-tubulin small complex components using protein tags as labels for single particle EM.

Choy RM, Kollman JM, Zelter A, Davis TN, Agard DA.

J Struct Biol. 2009 Dec;168(3):571-4. doi: 10.1016/j.jsb.2009.08.012. Epub 2009 Aug 31.

28.

Expression and functional characterization of cytochrome P450 26A1, a retinoic acid hydroxylase.

Lutz JD, Dixit V, Yeung CK, Dickmann LJ, Zelter A, Thatcher JE, Nelson WL, Isoherranen N.

Biochem Pharmacol. 2009 Jan 15;77(2):258-68. doi: 10.1016/j.bcp.2008.10.012. Epub 2008 Oct 17.

29.

Phosphoregulation and depolymerization-driven movement of the Dam1 complex do not require ring formation.

Gestaut DR, Graczyk B, Cooper J, Widlund PO, Zelter A, Wordeman L, Asbury CL, Davis TN.

Nat Cell Biol. 2008 Apr;10(4):407-14. doi: 10.1038/ncb1702. Epub 2008 Mar 23.

30.

The structure of the gamma-tubulin small complex: implications of its architecture and flexibility for microtubule nucleation.

Kollman JM, Zelter A, Muller EG, Fox B, Rice LM, Davis TN, Agard DA.

Mol Biol Cell. 2008 Jan;19(1):207-15. Epub 2007 Oct 31.

31.

A comparative genomic analysis of the calcium signaling machinery in Neurospora crassa, Magnaporthe grisea, and Saccharomyces cerevisiae.

Zelter A, Bencina M, Bowman BJ, Yarden O, Read ND.

Fungal Genet Biol. 2004 Sep;41(9):827-41.

PMID:
15288019
32.

Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism.

Borkovich KA, Alex LA, Yarden O, Freitag M, Turner GE, Read ND, Seiler S, Bell-Pedersen D, Paietta J, Plesofsky N, Plamann M, Goodrich-Tanrikulu M, Schulte U, Mannhaupt G, Nargang FE, Radford A, Selitrennikoff C, Galagan JE, Dunlap JC, Loros JJ, Catcheside D, Inoue H, Aramayo R, Polymenis M, Selker EU, Sachs MS, Marzluf GA, Paulsen I, Davis R, Ebbole DJ, Zelter A, Kalkman ER, O'Rourke R, Bowring F, Yeadon J, Ishii C, Suzuki K, Sakai W, Pratt R.

Microbiol Mol Biol Rev. 2004 Mar;68(1):1-108. Review.

33.

The genome sequence of the filamentous fungus Neurospora crassa.

Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, Jaffe D, FitzHugh W, Ma LJ, Smirnov S, Purcell S, Rehman B, Elkins T, Engels R, Wang S, Nielsen CB, Butler J, Endrizzi M, Qui D, Ianakiev P, Bell-Pedersen D, Nelson MA, Werner-Washburne M, Selitrennikoff CP, Kinsey JA, Braun EL, Zelter A, Schulte U, Kothe GO, Jedd G, Mewes W, Staben C, Marcotte E, Greenberg D, Roy A, Foley K, Naylor J, Stange-Thomann N, Barrett R, Gnerre S, Kamal M, Kamvysselis M, Mauceli E, Bielke C, Rudd S, Frishman D, Krystofova S, Rasmussen C, Metzenberg RL, Perkins DD, Kroken S, Cogoni C, Macino G, Catcheside D, Li W, Pratt RJ, Osmani SA, DeSouza CP, Glass L, Orbach MJ, Berglund JA, Voelker R, Yarden O, Plamann M, Seiler S, Dunlap J, Radford A, Aramayo R, Natvig DO, Alex LA, Mannhaupt G, Ebbole DJ, Freitag M, Paulsen I, Sachs MS, Lander ES, Nusbaum C, Birren B.

Nature. 2003 Apr 24;422(6934):859-68.

PMID:
12712197
34.

Effect of sumatriptan, a 5HT1 agonist, on the frequency of transient lower esophageal sphincter relaxations and gastroesophageal reflux in healthy subjects.

Sifrim D, Holloway RH, Tack J, Zelter A, Missotten T, Coulie B, Janssens J.

Am J Gastroenterol. 1999 Nov;94(11):3158-64.

PMID:
10566707
35.

A critical appraisal of electromyography in evaluating esophageal function.

Zelter A, Zanutto S, Mazure P.

J Clin Gastroenterol. 1990 Dec;12(6):613-5. No abstract available.

PMID:
2266234
36.

[Megaesophagus secondary to carcinoma of the cardia: apropos of 4 cases].

Mazure PA, Zelter AR, Salis GB, Chiocca JC.

Acta Gastroenterol Latinoam. 1984;14(2):135-8. Spanish.

PMID:
6535356
37.

[Evaluation of conventional hepatic scintigraphy as a diagnostic method].

Zelter AR, Matute ML.

Acta Gastroenterol Latinoam. 1983;13(1):53-8. Spanish.

PMID:
6624367
38.

[Achalasia of the esophagus. 10-years' experience].

Chiocca JC, Salis GB, Zelter A, Mazure PA.

Medicina (B Aires). 1982;42(6 Pt 1):603-20. Spanish. No abstract available.

PMID:
7183887
39.

[Esophageal pathology associated with achalasia].

Zelter AR, Chiocca JC, Salis GB, Mazure PA.

Acta Gastroenterol Latinoam. 1982;12(1):23-32. Spanish.

PMID:
6814141

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