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Items: 25

1.

Topological information embodied in local juxtaposition geometry provides a statistical mechanical basis for unknotting by type-2 DNA topoisomerases.

Liu Z, Mann JK, Zechiedrich EL, Chan HS.

J Mol Biol. 2006 Aug 11;361(2):268-85. Epub 2006 Jun 19.

PMID:
16842819
2.

Exploring writhe in supercoiled minicircle DNA.

Fogg JM, Kolmakova N, Rees I, Magonov S, Hansma H, Perona JJ, Zechiedrich EL.

J Phys Condens Matter. 2006 Apr 12;18(14):S145-S159.

3.

Electrostatics of DNA-DNA juxtapositions: consequences for type II topoisomerase function.

Randall GL, Pettitt BM, Buck GR, Zechiedrich EL.

J Phys Condens Matter. 2006 Apr 12;18(14):S173-S185.

5.

Quorum sensing and multidrug transporters in Escherichia coli.

Yang S, Lopez CR, Zechiedrich EL.

Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2386-91. Epub 2006 Feb 7.

6.

A role for topoisomerase III in a recombination pathway alternative to RuvABC.

Lopez CR, Yang S, Deibler RW, Ray SA, Pennington JM, Digate RJ, Hastings PJ, Rosenberg SM, Zechiedrich EL.

Mol Microbiol. 2005 Oct;58(1):80-101.

7.

A mutation in Escherichia coli DNA gyrase conferring quinolone resistance results in sensitivity to drugs targeting eukaryotic topoisomerase II.

Gruger T, Nitiss JL, Maxwell A, Zechiedrich EL, Heisig P, Seeber S, Pommier Y, Strumberg D.

Antimicrob Agents Chemother. 2004 Dec;48(12):4495-504.

8.

DNA disentangling by type-2 topoisomerases.

Buck GR, Zechiedrich EL.

J Mol Biol. 2004 Jul 23;340(5):933-9.

PMID:
15236957
9.

Coating DNA with RecA protein to distinguish DNA path by electron microscopy.

Zechiedrich EL, Crisona NJ.

Methods Mol Biol. 1999;94:99-107. No abstract available.

PMID:
12844866
10.

Relative contributions of the AcrAB, MdfA and NorE efflux pumps to quinolone resistance in Escherichia coli.

Yang S, Clayton SR, Zechiedrich EL.

J Antimicrob Chemother. 2003 Mar;51(3):545-56.

PMID:
12615854
11.

Control of the AcrAB multidrug efflux pump by quorum-sensing regulator SdiA.

Rahmati S, Yang S, Davidson AL, Zechiedrich EL.

Mol Microbiol. 2002 Feb;43(3):677-85.

12.

Topoisomerase IV, alone, unknots DNA in E. coli.

Deibler RW, Rahmati S, Zechiedrich EL.

Genes Dev. 2001 Mar 15;15(6):748-61.

13.

Roles of topoisomerases in maintaining steady-state DNA supercoiling in Escherichia coli.

Zechiedrich EL, Khodursky AB, Bachellier S, Schneider R, Chen D, Lilley DM, Cozzarelli NR.

J Biol Chem. 2000 Mar 17;275(11):8103-13.

14.

Topoisomerase IV, not gyrase, decatenates products of site-specific recombination in Escherichia coli.

Zechiedrich EL, Khodursky AB, Cozzarelli NR.

Genes Dev. 1997 Oct 1;11(19):2580-92.

15.

Topoisomerase IV is a target of quinolones in Escherichia coli.

Khodursky AB, Zechiedrich EL, Cozzarelli NR.

Proc Natl Acad Sci U S A. 1995 Dec 5;92(25):11801-5.

16.
17.

Processive recombination by wild-type gin and an enhancer-independent mutant. Insight into the mechanisms of recombination selectivity and strand exchange.

Crisona NJ, Kanaar R, Gonzalez TN, Zechiedrich EL, Klippel A, Cozzarelli NR.

J Mol Biol. 1994 Oct 28;243(3):437-57.

PMID:
7966272
18.

The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication.

Adams DE, Shekhtman EM, Zechiedrich EL, Schmid MB, Cozzarelli NR.

Cell. 1992 Oct 16;71(2):277-88.

PMID:
1330320
19.
20.

Inhibition of eukaryotic topoisomerase II by ultraviolet-induced cyclobutane pyrimidine dimers.

Corbett AH, Zechiedrich EL, Lloyd RS, Osheroff N.

J Biol Chem. 1991 Oct 15;266(29):19666-71.

21.

Catalytic function of DNA topoisomerase II.

Osheroff N, Zechiedrich EL, Gale KC.

Bioessays. 1991 Jun;13(6):269-73. Review.

PMID:
1654050
22.
23.

Strand specificity of the topoisomerase II mediated double-stranded DNA cleavage reaction.

Andersen AH, Christiansen K, Zechiedrich EL, Jensen PS, Osheroff N, Westergaard O.

Biochemistry. 1989 Jul 25;28(15):6237-44.

PMID:
2551368
24.

Double-stranded DNA cleavage/religation reaction of eukaryotic topoisomerase II: evidence for a nicked DNA intermediate.

Zechiedrich EL, Christiansen K, Andersen AH, Westergaard O, Osheroff N.

Biochemistry. 1989 Jul 25;28(15):6229-36.

PMID:
2551367
25.

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