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Items: 1 to 50 of 110

1.

Conotoxin Diversity in the Venom Gland Transcriptome of the Magician's Cone, Pionoconus magus.

Pardos-Blas JR, Irisarri I, Abalde S, Tenorio MJ, Zardoya R.

Mar Drugs. 2019 Sep 27;17(10). pii: E553. doi: 10.3390/md17100553.

2.

New patellogastropod mitogenomes help counteracting long-branch attraction in the deep phylogeny of gastropod mollusks.

Uribe JE, Irisarri I, Templado J, Zardoya R.

Mol Phylogenet Evol. 2019 Apr;133:12-23. doi: 10.1016/j.ympev.2018.12.019. Epub 2018 Dec 17.

PMID:
30572020
3.

Conotoxin Diversity in Chelyconus ermineus (Born, 1778) and the Convergent Origin of Piscivory in the Atlantic and Indo-Pacific Cones.

Abalde S, Tenorio MJ, Afonso CML, Zardoya R.

Genome Biol Evol. 2018 Oct 1;10(10):2643-2662. doi: 10.1093/gbe/evy150.

4.

Phylogenetic relationships of the conoidean snails (Gastropoda: Caenogastropoda) based on mitochondrial genomes.

Uribe JE, Zardoya R, Puillandre N.

Mol Phylogenet Evol. 2018 Oct;127:898-906. doi: 10.1016/j.ympev.2018.06.037. Epub 2018 Jun 28.

PMID:
29959984
5.

Phylogenetic relationships of cone snails endemic to Cabo Verde based on mitochondrial genomes.

Abalde S, Tenorio MJ, Afonso CML, Uribe JE, Echeverry AM, Zardoya R.

BMC Evol Biol. 2017 Nov 25;17(1):231. doi: 10.1186/s12862-017-1069-x.

6.

Cryptic lineage divergence in marine environments: genetic differentiation at multiple spatial and temporal scales in the widespread intertidal goby Gobiosoma bosc.

Milá B, Van Tassell JL, Calderón JA, Rüber L, Zardoya R.

Ecol Evol. 2017 Jun 22;7(14):5514-5523. doi: 10.1002/ece3.3161. eCollection 2017 Jul.

7.

Mitogenomic phylogeny of cone snails endemic to Senegal.

Abalde S, Tenorio MJ, Afonso CML, Zardoya R.

Mol Phylogenet Evol. 2017 Jul;112:79-87. doi: 10.1016/j.ympev.2017.04.020. Epub 2017 Apr 24.

PMID:
28450228
8.

Beyond Conus: Phylogenetic relationships of Conidae based on complete mitochondrial genomes.

Uribe JE, Puillandre N, Zardoya R.

Mol Phylogenet Evol. 2017 Feb;107:142-151. doi: 10.1016/j.ympev.2016.10.008. Epub 2016 Oct 27.

PMID:
27794464
9.

Phylogenetic relationships of Mediterranean and North-East Atlantic Cantharidinae and notes on Stomatellinae (Vetigastropoda: Trochidae).

Uribe JE, Williams ST, Templado J, Buge B, Zardoya R.

Mol Phylogenet Evol. 2017 Feb;107:64-79. doi: 10.1016/j.ympev.2016.10.009. Epub 2016 Oct 13.

PMID:
27746316
10.

Phylogenetic relationships among superfamilies of Neritimorpha (Mollusca: Gastropoda).

Uribe JE, Colgan D, Castro LR, Kano Y, Zardoya R.

Mol Phylogenet Evol. 2016 Nov;104:21-31. doi: 10.1016/j.ympev.2016.07.021. Epub 2016 Jul 22.

PMID:
27456746
11.

Caenogastropod mitogenomics.

Osca D, Templado J, Zardoya R.

Mol Phylogenet Evol. 2015 Dec;93:118-28. doi: 10.1016/j.ympev.2015.07.011. Epub 2015 Jul 26.

PMID:
26220836
12.

Patterns of genetic variation in the endangered European mink (Mustela lutreola L., 1761).

Cabria MT, Gonzalez EG, Gomez-Moliner BJ, Michaux JR, Skumatov D, Kranz A, Fournier P, Palazon S, Zardoya R.

BMC Evol Biol. 2015 Jul 17;15:141. doi: 10.1186/s12862-015-0427-9.

13.

TRUFA: A User-Friendly Web Server for de novo RNA-seq Analysis Using Cluster Computing.

Kornobis E, Cabellos L, Aguilar F, Frías-López C, Rozas J, Marco J, Zardoya R.

Evol Bioinform Online. 2015 May 24;11:97-104. doi: 10.4137/EBO.S23873. eCollection 2015.

14.

Island survivors: population genetic structure and demography of the critically endangered giant lizard of La Gomera, Gallotia bravoana.

Gonzalez EG, Cerón-Souza I, Mateo JA, Zardoya R.

BMC Genet. 2014 Nov 25;15:121. doi: 10.1186/s12863-014-0121-8.

15.

The complete mitochondrial genome of Scutopus ventrolineatus (Mollusca: Chaetodermomorpha) supports the Aculifera hypothesis.

Osca D, Irisarri I, Todt C, Grande C, Zardoya R.

BMC Evol Biol. 2014 Sep 25;14:197. doi: 10.1186/s12862-014-0197-9.

16.

The mitochondrial genome of Ifremeria nautilei and the phylogenetic position of the enigmatic deep-sea Abyssochrysoidea (Mollusca: Gastropoda).

Osca D, Templado J, Zardoya R.

Gene. 2014 Sep 1;547(2):257-66. doi: 10.1016/j.gene.2014.06.040. Epub 2014 Jun 23.

PMID:
24967939
17.

Life-history evolution and mitogenomic phylogeny of caecilian amphibians.

San Mauro D, Gower DJ, Müller H, Loader SP, Zardoya R, Nussbaum RA, Wilkinson M.

Mol Phylogenet Evol. 2014 Apr;73:177-89. doi: 10.1016/j.ympev.2014.01.009. Epub 2014 Jan 27.

PMID:
24480323
18.

Diversity and evolution of membrane intrinsic proteins.

Abascal F, Irisarri I, Zardoya R.

Biochim Biophys Acta. 2014 May;1840(5):1468-81. doi: 10.1016/j.bbagen.2013.12.001. Epub 2013 Dec 16. Review.

PMID:
24355433
19.

Molecular phylogenetics of Gobioidei and phylogenetic placement of European gobies.

Agorreta A, San Mauro D, Schliewen U, Van Tassell JL, Kovačić M, Zardoya R, Rüber L.

Mol Phylogenet Evol. 2013 Dec;69(3):619-33. doi: 10.1016/j.ympev.2013.07.017. Epub 2013 Jul 30.

PMID:
23911892
20.

Microsatellite DNA capture from enriched libraries.

Gonzalez EG, Zardoya R.

Methods Mol Biol. 2013;1006:67-87. doi: 10.1007/978-1-62703-389-3_5.

PMID:
23546784
21.

The origin of modern frogs (Neobatrachia) was accompanied by acceleration in mitochondrial and nuclear substitution rates.

Irisarri I, San Mauro D, Abascal F, Ohler A, Vences M, Zardoya R.

BMC Genomics. 2012 Nov 15;13:626. doi: 10.1186/1471-2164-13-626.

22.

LRRC8 proteins share a common ancestor with pannexins, and may form hexameric channels involved in cell-cell communication.

Abascal F, Zardoya R.

Bioessays. 2012 Jul;34(7):551-60. doi: 10.1002/bies.201100173. Epub 2012 Apr 25.

PMID:
22532330
23.

The evolution of the mitochondrial genetic code in arthropods revisited.

Abascal F, Posada D, Zardoya R.

Mitochondrial DNA. 2012 Apr;23(2):84-91. doi: 10.3109/19401736.2011.653801. Epub 2012 Mar 7.

PMID:
22397376
24.

Evolutionary analyses of gap junction protein families.

Abascal F, Zardoya R.

Biochim Biophys Acta. 2013 Jan;1828(1):4-14. doi: 10.1016/j.bbamem.2012.02.007. Epub 2012 Feb 14. Review.

25.

Experimental design in phylogenetics: testing predictions from expected information.

San Mauro D, Gower DJ, Cotton JA, Zardoya R, Wilkinson M, Massingham T.

Syst Biol. 2012 Jul;61(4):661-74. doi: 10.1093/sysbio/sys028. Epub 2012 Feb 10.

PMID:
22328568
26.

Integrative analyses of speciation and divergence in Psammodromus hispanicus (Squamata: Lacertidae).

Fitze PS, Gonzalez-Jimena V, San-Jose LM, San Mauro D, Aragón P, Suarez T, Zardoya R.

BMC Evol Biol. 2011 Nov 30;11:347. doi: 10.1186/1471-2148-11-347.

27.

Reversal to air-driven sound production revealed by a molecular phylogeny of tongueless frogs, family Pipidae.

Irisarri I, Vences M, San Mauro D, Glaw F, Zardoya R.

BMC Evol Biol. 2011 Apr 27;11:114. doi: 10.1186/1471-2148-11-114.

28.

Ancient origin of endemic Iberian earth-boring dung beetles (Geotrupidae).

Cunha RL, Verdú JR, Lobo JM, Zardoya R.

Mol Phylogenet Evol. 2011 Jun;59(3):578-86. doi: 10.1016/j.ympev.2011.03.028. Epub 2011 Apr 5.

PMID:
21477656
29.

Bayesian analysis of hybridization and introgression between the endangered european mink (Mustela lutreola) and the polecat (Mustela putorius).

Cabria MT, Michaux JR, Gómez-Moliner BJ, Skumatov D, Maran T, Fournier P, de Luzuriaga JL, Zardoya R.

Mol Ecol. 2011 Mar;20(6):1176-90. doi: 10.1111/j.1365-294X.2010.04988.x. Epub 2011 Jan 18.

30.

The complete mitochondrial genome of the relict frog Leiopelma archeyi: insights into the root of the frog Tree of Life.

Irisarri I, San Mauro D, Green DM, Zardoya R.

Mitochondrial DNA. 2010 Oct;21(5):173-82. doi: 10.3109/19401736.2010.513973.

PMID:
20958226
31.

Experimental design in caecilian systematics: phylogenetic information of mitochondrial genomes and nuclear rag1.

San Mauro D, Gower DJ, Massingham T, Wilkinson M, Zardoya R, Cotton JA.

Syst Biol. 2009 Aug;58(4):425-38. doi: 10.1093/sysbio/syp043. Epub 2009 Aug 18.

PMID:
20525595
32.

TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations.

Abascal F, Zardoya R, Telford MJ.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W7-13. doi: 10.1093/nar/gkq291. Epub 2010 Apr 30.

33.

Evolutionary biology in biodiversity science, conservation, and policy: a call to action.

Hendry AP, Lohmann LG, Conti E, Cracraft J, Crandall KA, Faith DP, Häuser C, Joly CA, Kogure K, Larigauderie A, Magallón S, Moritz C, Tillier S, Zardoya R, Prieur-Richard AH, Walther BA, Yahara T, Donoghue MJ.

Evolution. 2010 May;64(5):1517-28. doi: 10.1111/j.1558-5646.2010.00947.x. Epub 2010 Jan 11.

PMID:
20067518
34.

Neogastropod phylogenetic relationships based on entire mitochondrial genomes.

Cunha RL, Grande C, Zardoya R.

BMC Evol Biol. 2009 Aug 23;9:210. doi: 10.1186/1471-2148-9-210.

35.

Oxidative stress, thermogenesis and evolution of uncoupling proteins.

Rial E, Zardoya R.

J Biol. 2009;8(6):58. doi: 10.1186/jbiol155. Epub 2009 Jun 16. Review.

36.

Polymorphic microsatellite markers for the critically endangered Balearic shearwater, Puffinus mauretanicus.

Gonzalez EG, Genovart M, Oro D, Zardoya R, Juste J.

Mol Ecol Resour. 2009 May;9(3):1044-6. doi: 10.1111/j.1755-0998.2009.02563.x. Epub 2009 Feb 19.

PMID:
21564834
37.

Genetic code prediction for metazoan mitochondria with GenDecoder.

Abascal F, Zardoya R, Posada D.

Methods Mol Biol. 2009;537:233-42. doi: 10.1007/978-1-59745-251-9_11.

PMID:
19378147
38.

Genetic structuring and migration patterns of Atlantic bigeye tuna, Thunnus obesus (Lowe, 1839).

Gonzalez EG, Beerli P, Zardoya R.

BMC Evol Biol. 2008 Sep 17;8:252. doi: 10.1186/1471-2148-8-252.

39.

Phylogenetic relationships of Middle American cichlids (Cichlidae, Heroini) based on combined evidence from nuclear genes, mtDNA, and morphology.

Rícan O, Zardoya R, Doadrio I.

Mol Phylogenet Evol. 2008 Dec;49(3):941-57. doi: 10.1016/j.ympev.2008.07.022. Epub 2008 Aug 7.

PMID:
18725305
40.

Effect of taxon sampling on recovering the phylogeny of squamate reptiles based on complete mitochondrial genome and nuclear gene sequence data.

Albert EM, San Mauro D, García-París M, Rüber L, Zardoya R.

Gene. 2009 Jul 15;441(1-2):12-21. doi: 10.1016/j.gene.2008.05.014. Epub 2008 Jul 17.

PMID:
18639394
41.

Sequencing and phylogenomic analysis of whole mitochondrial genomes of animals.

Zardoya R, Suárez M.

Methods Mol Biol. 2008;422:185-200. doi: 10.1007/978-1-59745-581-7_12.

PMID:
18629668
42.

Evolution of the insulin receptor family and receptor isoform expression in vertebrates.

Hernández-Sánchez C, Mansilla A, de Pablo F, Zardoya R.

Mol Biol Evol. 2008 Jun;25(6):1043-53. doi: 10.1093/molbev/msn036. Epub 2008 Feb 29.

PMID:
18310661
43.

Evolution of gastropod mitochondrial genome arrangements.

Grande C, Templado J, Zardoya R.

BMC Evol Biol. 2008 Feb 26;8:61. doi: 10.1186/1471-2148-8-61.

44.

Replaying the tape: recurring biogeographical patterns in Cape Verde Conus after 12 million years.

Cunha RL, Tenorio MJ, Afonso C, Castilho R, Zardoya R.

Mol Ecol. 2008 Feb;17(3):885-901. doi: 10.1111/j.1365-294X.2007.03618.x. Epub 2007 Dec 20.

PMID:
18179424
45.

Antarctic fish mitochondrial genomes lack ND6 gene.

Papetti C, Liò P, Rüber L, Patarnello T, Zardoya R.

J Mol Evol. 2007 Nov;65(5):519-28. Epub 2007 Oct 23.

PMID:
17955154
47.

Phylogeographical and speciation patterns in subterranean worm lizards of the genus Blanus (Amphisbaenia: Blanidae).

Albert EM, Zardoya R, García-París M.

Mol Ecol. 2007 Apr;16(7):1519-31.

PMID:
17391273
48.

Actinobacteria cyclophilins: phylogenetic relationships and description of new class- and order-specific paralogues.

Manteca A, Pelaez AI, Zardoya R, Sanchez J.

J Mol Evol. 2006 Dec;63(6):719-32. Epub 2006 Nov 10.

PMID:
17103061
49.
50.

Phylogeny and biogeography of 91 species of heroine cichlids (Teleostei: Cichlidae) based on sequences of the cytochrome b gene.

Pérez GA, Rícan O, Ortí G, Bermingham E, Doadrio I, Zardoya R.

Mol Phylogenet Evol. 2007 Apr;43(1):91-110. Epub 2006 Aug 22.

PMID:
17045493

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