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Items: 50

1.

Characterization of Enzymatic Reactions Using ITC.

Zambelli B.

Methods Mol Biol. 2019;1964:251-266. doi: 10.1007/978-1-4939-9179-2_18.

PMID:
30929248
2.

Characterization of acetyl-CoA synthetase kinetics and ATP-binding.

Gallego-Jara J, Terol GL, Écija Conesa A, Zambelli B, Cánovas Díaz M, de Diego Puente T.

Biochim Biophys Acta Gen Subj. 2019 Jun;1863(6):1040-1049. doi: 10.1016/j.bbagen.2019.03.017. Epub 2019 Mar 28.

PMID:
30928490
3.

The carbon monoxide dehydrogenase accessory protein CooJ is a histidine-rich multidomain dimer containing an unexpected Ni(II)-binding site.

Alfano M, Pérard J, Carpentier P, Basset C, Zambelli B, Timm J, Crouzy S, Ciurli S, Cavazza C.

J Biol Chem. 2019 May 10;294(19):7601-7614. doi: 10.1074/jbc.RA119.008011. Epub 2019 Mar 11.

PMID:
30858174
4.

Structure and dynamics of Helicobacter pylori nickel-chaperone HypA: an integrated approach using NMR spectroscopy, functional assays and computational tools.

Spronk CAEM, Żerko S, Górka M, Koźmiński W, Bardiaux B, Zambelli B, Musiani F, Piccioli M, Basak P, Blum FC, Johnson RC, Hu H, Merrell DS, Maroney M, Ciurli S.

J Biol Inorg Chem. 2018 Dec;23(8):1309-1330. doi: 10.1007/s00775-018-1616-y. Epub 2018 Sep 27.

PMID:
30264175
5.

The lineage-specific, intrinsically disordered N-terminal extension of monothiol glutaredoxin 1 from trypanosomes contains a regulatory region.

Sturlese M, Manta B, Bertarello A, Bonilla M, Lelli M, Zambelli B, Grunberg K, Mammi S, Comini MA, Bellanda M.

Sci Rep. 2018 Sep 12;8(1):13716. doi: 10.1038/s41598-018-31817-4.

6.

Calmodulin Enhances Cryptochrome Binding to INAD in Drosophila Photoreceptors.

Mazzotta GM, Bellanda M, Minervini G, Damulewicz M, Cusumano P, Aufiero S, Stefani M, Zambelli B, Mammi S, Costa R, Tosatto SCE.

Front Mol Neurosci. 2018 Aug 20;11:280. doi: 10.3389/fnmol.2018.00280. eCollection 2018.

7.

Targeting Helicobacter pylori urease activity and maturation: In-cell high-throughput approach for drug discovery.

Tarsia C, Danielli A, Florini F, Cinelli P, Ciurli S, Zambelli B.

Biochim Biophys Acta Gen Subj. 2018 Oct;1862(10):2245-2253. doi: 10.1016/j.bbagen.2018.07.020. Epub 2018 Jul 24.

PMID:
30048738
8.

Structural analysis of the interaction between Jaburetox, an intrinsically disordered protein, and membrane models.

Broll V, Martinelli AHS, Lopes FC, Fruttero LL, Zambelli B, Salladini E, Dobrovolska O, Ciurli S, Carlini CR.

Colloids Surf B Biointerfaces. 2017 Nov 1;159:849-860. doi: 10.1016/j.colsurfb.2017.08.053. Epub 2017 Aug 30.

PMID:
28892869
9.

The relationship between folding and activity in UreG, an intrinsically disordered enzyme.

Palombo M, Bonucci A, Etienne E, Ciurli S, Uversky VN, Guigliarelli B, Belle V, Mileo E, Zambelli B.

Sci Rep. 2017 Jul 20;7(1):5977. doi: 10.1038/s41598-017-06330-9.

10.

The CO dehydrogenase accessory protein CooT is a novel nickel-binding protein.

Timm J, Brochier-Armanet C, Perard J, Zambelli B, Ollagnier-de-Choudens S, Ciurli S, Cavazza C.

Metallomics. 2017 May 24;9(5):575-583. doi: 10.1039/c7mt00063d.

PMID:
28447092
11.

Surface plasmon resonance and isothermal titration calorimetry to monitor the Ni(II)-dependent binding of Helicobacter pylori NikR to DNA.

Fabini E, Zambelli B, Mazzei L, Ciurli S, Bertucci C.

Anal Bioanal Chem. 2016 Nov;408(28):7971-7980. Epub 2016 Aug 31.

PMID:
27580605
12.

Nickel impact on human health: An intrinsic disorder perspective.

Zambelli B, Uversky VN, Ciurli S.

Biochim Biophys Acta. 2016 Dec;1864(12):1714-1731. doi: 10.1016/j.bbapap.2016.09.008. Epub 2016 Sep 17. Review.

PMID:
27645710
13.

Metal-responsive promoter DNA compaction by the ferric uptake regulator.

Roncarati D, Pelliciari S, Doniselli N, Maggi S, Vannini A, Valzania L, Mazzei L, Zambelli B, Rivetti C, Danielli A.

Nat Commun. 2016 Aug 25;7:12593. doi: 10.1038/ncomms12593.

14.

Isothermal Titration Calorimetry to Characterize Enzymatic Reactions.

Mazzei L, Ciurli S, Zambelli B.

Methods Enzymol. 2016;567:215-36. doi: 10.1016/bs.mie.2015.07.022. Epub 2015 Sep 1.

PMID:
26794356
15.

Unfoldome variation upon plant-pathogen interactions: strawberry infection by Colletotrichum acutatum.

Baraldi E, Coller E, Zoli L, Cestaro A, Tosatto SC, Zambelli B.

Plant Mol Biol. 2015 Sep;89(1-2):49-65. doi: 10.1007/s11103-015-0353-7. Epub 2015 Aug 6.

PMID:
26245354
16.

On the interaction of Helicobacter pylori NikR, a Ni(II)-responsive transcription factor, with the urease operator: in solution and in silico studies.

Mazzei L, Dobrovolska O, Musiani F, Zambelli B, Ciurli S.

J Biol Inorg Chem. 2015 Sep;20(6):1021-37. doi: 10.1007/s00775-015-1284-0. Epub 2015 Jul 24.

PMID:
26204982
17.

Nickel-responsive transcriptional regulators.

Musiani F, Zambelli B, Bazzani M, Mazzei L, Ciurli S.

Metallomics. 2015 Sep;7(9):1305-18. doi: 10.1039/c5mt00072f. Review.

PMID:
26099858
18.

Intrinsic disorder and metal binding in UreG proteins from Archae hyperthermophiles: GTPase enzymes involved in the activation of Ni(II) dependent urease.

Miraula M, Ciurli S, Zambelli B.

J Biol Inorg Chem. 2015 Jun;20(4):739-55. doi: 10.1007/s00775-015-1261-7. Epub 2015 Apr 7.

PMID:
25846143
19.

Pliable natural biocide: Jaburetox is an intrinsically disordered insecticidal and fungicidal polypeptide derived from jack bean urease.

Lopes FC, Dobrovolska O, Real-Guerra R, Broll V, Zambelli B, Musiani F, Uversky VN, Carlini CR, Ciurli S.

FEBS J. 2015 Mar;282(6):1043-64. doi: 10.1111/febs.13201. Epub 2015 Feb 11.

20.

The conformational response to Zn(II) and Ni(II) binding of Sporosarcina pasteurii UreG, an intrinsically disordered GTPase.

D'Urzo A, Santambrogio C, Grandori R, Ciurli S, Zambelli B.

J Biol Inorg Chem. 2014 Dec;19(8):1341-54. doi: 10.1007/s00775-014-1191-9. Epub 2014 Sep 9.

PMID:
25200810
21.

Promiscuous nickel import in human pathogens: structure, thermodynamics, and evolution of extracytoplasmic nickel-binding proteins.

Lebrette H, Brochier-Armanet C, Zambelli B, de Reuse H, Borezée-Durant E, Ciurli S, Cavazza C.

Structure. 2014 Oct 7;22(10):1421-32. doi: 10.1016/j.str.2014.07.012. Epub 2014 Sep 4.

22.

Molecular landscape of the interaction between the urease accessory proteins UreE and UreG.

Merloni A, Dobrovolska O, Zambelli B, Agostini F, Bazzani M, Musiani F, Ciurli S.

Biochim Biophys Acta. 2014 Sep;1844(9):1662-74. doi: 10.1016/j.bbapap.2014.06.016. Epub 2014 Jun 27.

PMID:
24982029
23.

Hot biological catalysis: isothermal titration calorimetry to characterize enzymatic reactions.

Mazzei L, Ciurli S, Zambelli B.

J Vis Exp. 2014 Apr 4;(86). doi: 10.3791/51487.

24.

Nickel and human health.

Zambelli B, Ciurli S.

Met Ions Life Sci. 2013;13:321-57. doi: 10.1007/978-94-007-7500-8_10. Review.

PMID:
24470096
25.

Nickel binding properties of Helicobacter pylori UreF, an accessory protein in the nickel-based activation of urease.

Zambelli B, Berardi A, Martin-Diaconescu V, Mazzei L, Musiani F, Maroney MJ, Ciurli S.

J Biol Inorg Chem. 2014 Mar;19(3):319-34. doi: 10.1007/s00775-013-1068-3. Epub 2013 Nov 30.

26.

Selectivity of Ni(II) and Zn(II) binding to Sporosarcina pasteurii UreE, a metallochaperone in the urease assembly: a calorimetric and crystallographic study.

Zambelli B, Banaszak K, Merloni A, Kiliszek A, Rypniewski W, Ciurli S.

J Biol Inorg Chem. 2013 Dec;18(8):1005-17. doi: 10.1007/s00775-013-1049-6. Epub 2013 Oct 15.

PMID:
24126709
27.

Engineered biosealant strains producing inorganic and organic biopolymers.

Bergdale TE, Pinkelman RJ, Hughes SR, Zambelli B, Ciurli S, Bang SS.

J Biotechnol. 2012 Oct 31;161(3):181-9. doi: 10.1016/j.jbiotec.2012.07.001. Epub 2012 Jul 10.

PMID:
22789480
28.

Biochemical and structural studies on native and recombinant Glycine max UreG: a detailed characterization of a plant urease accessory protein.

Real-Guerra R, Staniscuaski F, Zambelli B, Musiani F, Ciurli S, Carlini CR.

Plant Mol Biol. 2012 Mar;78(4-5):461-75. doi: 10.1007/s11103-012-9878-1. Epub 2012 Jan 22.

PMID:
22271305
29.

Metal ion-mediated DNA-protein interactions.

Zambelli B, Musiani F, Ciurli S.

Met Ions Life Sci. 2012;10:135-70. doi: 10.1007/978-94-007-2172-2_5. Review.

PMID:
22210338
30.

Crystallographic and X-ray absorption spectroscopic characterization of Helicobacter pylori UreE bound to Ni²⁺ and Zn²⁺ reveals a role for the disordered C-terminal arm in metal trafficking.

Banaszak K, Martin-Diaconescu V, Bellucci M, Zambelli B, Rypniewski W, Maroney MJ, Ciurli S.

Biochem J. 2012 Feb 1;441(3):1017-26. doi: 10.1042/BJ20111659.

31.

Insights in the (un)structural organization of Bacillus pasteurii UreG, an intrinsically disordered GTPase enzyme.

Zambelli B, Cremades N, Neyroz P, Turano P, Uversky VN, Ciurli S.

Mol Biosyst. 2012 Jan;8(1):220-8. doi: 10.1039/c1mb05227f. Epub 2011 Sep 16.

PMID:
21922108
32.

Complexes of the antitumoral drugs Doxorubicin and Sabarubicin with telomeric G-quadruplex in basket conformation: ground and excited state properties.

Manet I, Manoli F, Zambelli B, Andreano G, Masi A, Cellai L, Ottani S, Marconi G, Monti S.

Photochem Photobiol Sci. 2011 Aug;10(8):1326-37. doi: 10.1039/c1pp05065f. Epub 2011 Jun 9.

PMID:
21655621
33.

Chemistry of Ni2+ in urease: sensing, trafficking, and catalysis.

Zambelli B, Musiani F, Benini S, Ciurli S.

Acc Chem Res. 2011 Jul 19;44(7):520-30. doi: 10.1021/ar200041k. Epub 2011 May 4.

PMID:
21542631
34.

Zinc inhibition of bacterial cytochrome bc(1) reveals the role of cytochrome b E295 in proton release at the Q(o) site.

Lee DW, El Khoury Y, Francia F, Zambelli B, Ciurli S, Venturoli G, Hellwig P, Daldal F.

Biochemistry. 2011 May 24;50(20):4263-72. doi: 10.1021/bi200230e. Epub 2011 Apr 28.

35.

Computational Study of the DNA-Binding Protein Helicobacter pylori NikR: The Role of Ni(2.).

Musiani F, Bertoša B, Magistrato A, Zambelli B, Turano P, Losasso V, Micheletti C, Ciurli S, Carloni P.

J Chem Theory Comput. 2010 Nov 9;6(11):3503-15. doi: 10.1021/ct900635z. Epub 2010 Oct 21.

PMID:
26617100
36.

Affinity of the anthracycline antitumor drugs Doxorubicin and Sabarubicin for human telomeric G-quadruplex structures.

Manet I, Manoli F, Zambelli B, Andreano G, Masi A, Cellai L, Monti S.

Phys Chem Chem Phys. 2011 Jan 14;13(2):540-51. doi: 10.1039/c0cp00898b. Epub 2010 Nov 4.

PMID:
21052579
37.

Stereoselective interaction of ketoprofen enantiomers with β-cyclodextrin: ground state binding and photochemistry.

Marconi G, Mezzina E, Manet I, Manoli F, Zambelli B, Monti S.

Photochem Photobiol Sci. 2011 Jan;10(1):48-59. doi: 10.1039/c0pp00262c. Epub 2010 Oct 26.

PMID:
20978661
38.

Chiral recognition of 2-(3-benzoylphenyl)propionic acid (ketoprofen) by serum albumin: an investigation with microcalorimetry, circular dichroism and molecular modelling.

Monti S, Ottani S, Manoli F, Manet I, Scagnolari F, Zambelli B, Marconi G.

Phys Chem Chem Phys. 2009 Oct 28;11(40):9104-13. doi: 10.1039/b906021a. Epub 2009 Aug 5.

PMID:
19812830
39.

Helicobacter pylori UreE, a urease accessory protein: specific Ni(2+)- and Zn(2+)-binding properties and interaction with its cognate UreG.

Bellucci M, Zambelli B, Musiani F, Turano P, Ciurli S.

Biochem J. 2009 Jul 29;422(1):91-100. doi: 10.1042/BJ20090434.

PMID:
19476442
40.

The RNA hydrolysis and the cytokinin binding activities of PR-10 proteins are differently performed by two isoforms of the Pru p 1 peach major allergen and are possibly functionally related.

Zubini P, Zambelli B, Musiani F, Ciurli S, Bertolini P, Baraldi E.

Plant Physiol. 2009 Jul;150(3):1235-47. doi: 10.1104/pp.109.139543. Epub 2009 May 27.

41.

Structural characterization of binding of Cu(II) to tau protein.

Soragni A, Zambelli B, Mukrasch MD, Biernat J, Jeganathan S, Griesinger C, Ciurli S, Mandelkow E, Zweckstetter M.

Biochemistry. 2008 Oct 14;47(41):10841-51. doi: 10.1021/bi8008856. Epub 2008 Sep 20.

PMID:
18803399
42.

High-affinity Ni2+ binding selectively promotes binding of Helicobacter pylori NikR to its target urease promoter.

Zambelli B, Danielli A, Romagnoli S, Neyroz P, Ciurli S, Scarlato V.

J Mol Biol. 2008 Nov 28;383(5):1129-43. doi: 10.1016/j.jmb.2008.08.066. Epub 2008 Sep 4.

PMID:
18790698
43.

Zn2+-linked dimerization of UreG from Helicobacter pylori, a chaperone involved in nickel trafficking and urease activation.

Zambelli B, Turano P, Musiani F, Neyroz P, Ciurli S.

Proteins. 2009 Jan;74(1):222-39. doi: 10.1002/prot.22205.

PMID:
18767150
44.

The Ni2+ binding properties of Helicobacter pylori NikR.

Zambelli B, Bellucci M, Danielli A, Scarlato V, Ciurli S.

Chem Commun (Camb). 2007 Sep 21;(35):3649-51. Epub 2007 Jun 28.

PMID:
17728882
45.

A model-based proposal for the role of UreF as a GTPase-activating protein in the urease active site biosynthesis.

Salomone-Stagni M, Zambelli B, Musiani F, Ciurli S.

Proteins. 2007 Aug 15;68(3):749-61.

PMID:
17510959
46.

Biochemical studies on Mycobacterium tuberculosis UreG and comparative modeling reveal structural and functional conservation among the bacterial UreG family.

Zambelli B, Musiani F, Savini M, Tucker P, Ciurli S.

Biochemistry. 2007 Mar 20;46(11):3171-82. Epub 2007 Feb 20.

PMID:
17309280
47.
48.

The nickel site of Bacillus pasteurii UreE, a urease metallo-chaperone, as revealed by metal-binding studies and X-ray absorption spectroscopy.

Stola M, Musiani F, Mangani S, Turano P, Safarov N, Zambelli B, Ciurli S.

Biochemistry. 2006 May 23;45(20):6495-509.

PMID:
16700560
49.

UreG, a chaperone in the urease assembly process, is an intrinsically unstructured GTPase that specifically binds Zn2+.

Zambelli B, Stola M, Musiani F, De Vriendt K, Samyn B, Devreese B, Van Beeumen J, Turano P, Dikiy A, Bryant DA, Ciurli S.

J Biol Chem. 2005 Feb 11;280(6):4684-95. Epub 2004 Nov 12.

50.

Nickel trafficking: insights into the fold and function of UreE, a urease metallochaperone.

Musiani F, Zambelli B, Stola M, Ciurli S.

J Inorg Biochem. 2004 May;98(5):803-13.

PMID:
15134926

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