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Default mode network anatomy and function is linked to pediatric concussion recovery.

Iyer KK, Zalesky A, Barlow KM, Cocchi L.

Ann Clin Transl Neurol. 2019 Nov 22. doi: 10.1002/acn3.50951. [Epub ahead of print]


Prediction of sleep side effects following methylphenidate treatment in ADHD youth.

Yoo JH, Sharma V, Kim JW, McMakin DL, Hong SB, Zalesky A, Kim BN, Ryan ND.

Neuroimage Clin. 2019 Oct 21:102030. doi: 10.1016/j.nicl.2019.102030. [Epub ahead of print]


Synchronization lag in post stroke: relation to motor function and structural connectivity.

Wang X, Seguin C, Zalesky A, Wong WW, Chu WC, Tong RK.

Netw Neurosci. 2019 Sep 1;3(4):1121-1140. doi: 10.1162/netn_a_00105. eCollection 2019.


A cautionary note on the use of SIFT in pathological connectomes.

Zalesky A, Sarwar T, Ramamohanarao K.

Magn Reson Med. 2020 Mar;83(3):791-794. doi: 10.1002/mrm.28037. Epub 2019 Oct 21. No abstract available.


Inferring neural signalling directionality from undirected structural connectomes.

Seguin C, Razi A, Zalesky A.

Nat Commun. 2019 Sep 19;10(1):4289. doi: 10.1038/s41467-019-12201-w.


MR g-ratio-weighted connectome analysis in patients with multiple sclerosis.

Kamagata K, Zalesky A, Yokoyama K, Andica C, Hagiwara A, Shimoji K, Kumamaru KK, Takemura MY, Hoshino Y, Kamiya K, Hori M, Pantelis C, Hattori N, Aoki S.

Sci Rep. 2019 Sep 18;9(1):13522. doi: 10.1038/s41598-019-50025-2.


Reply to Yang et al.: Multilayer network switching and behavior.

Pedersen M, Zalesky A, Omidvarnia A, Jackson GD.

Proc Natl Acad Sci U S A. 2019 Aug 20;116(34):16673. doi: 10.1073/pnas.1910493116. Epub 2019 Aug 13. No abstract available.


Free-Water Imaging in White and Gray Matter in Parkinson's Disease.

Andica C, Kamagata K, Hatano T, Saito A, Uchida W, Ogawa T, Takeshige-Amano H, Zalesky A, Wada A, Suzuki M, Hagiwara A, Irie R, Hori M, Kumamaru KK, Oyama G, Shimo Y, Umemura A, Pantelis C, Hattori N, Aoki S.

Cells. 2019 Aug 5;8(8). pii: E839. doi: 10.3390/cells8080839.


Structural connectivity and weight loss in children with obesity: a study of the "connectobese".

Augustijn MJCM, Di Biase MA, Zalesky A, Van Acker L, De Guchtenaere A, D'Hondt E, Lenoir M, Deconinck FJA, Caeyenberghs K.

Int J Obes (Lond). 2019 Nov;43(11):2309-2321. doi: 10.1038/s41366-019-0380-6. Epub 2019 Jul 26.


A multivariate neuroimaging biomarker of individual outcome to transcranial magnetic stimulation in depression.

Cash RFH, Cocchi L, Anderson R, Rogachov A, Kucyi A, Barnett AJ, Zalesky A, Fitzgerald PB.

Hum Brain Mapp. 2019 Nov 1;40(16):4618-4629. doi: 10.1002/hbm.24725. Epub 2019 Jul 22.


Tractography-Guided Deep Brain Stimulation of the Anteromedial Globus Pallidus Internus for Refractory Obsessive-Compulsive Disorder: Case Report.

Azriel A, Farrand S, Di Biase M, Zalesky A, Lui E, Desmond P, Evans A, Awad M, Moscovici S, Velakoulis D, Bittar RG.

Neurosurgery. 2019 Jul 17. pii: nyz285. doi: 10.1093/neuros/nyz285. [Epub ahead of print]


Cognitive reserve attenuates age-related cognitive decline in the context of putatively accelerated brain ageing in schizophrenia-spectrum disorders.

Van Rheenen TE, Cropley V, Fagerlund B, Wannan C, Bruggemann J, Lenroot RK, Sundram S, Weickert CS, Weickert TW, Zalesky A, Bousman CA, Pantelis C.

Psychol Med. 2019 Jul 5:1-15. doi: 10.1017/S0033291719001417. [Epub ahead of print]


Large-scale brain modes reorganize between infant sleep states and carry prognostic information for preterms.

Tokariev A, Roberts JA, Zalesky A, Zhao X, Vanhatalo S, Breakspear M, Cocchi L.

Nat Commun. 2019 Jun 13;10(1):2619. doi: 10.1038/s41467-019-10467-8.


Evidence for Network-Based Cortical Thickness Reductions in Schizophrenia.

Wannan CMJ, Cropley VL, Chakravarty MM, Bousman C, Ganella EP, Bruggemann JM, Weickert TW, Weickert CS, Everall I, McGorry P, Velakoulis D, Wood SJ, Bartholomeusz CF, Pantelis C, Zalesky A.

Am J Psychiatry. 2019 Jul 1;176(7):552-563. doi: 10.1176/appi.ajp.2019.18040380. Epub 2019 Jun 5.


Relating brain connectivity with persistent symptoms in pediatric concussion.

Iyer KK, Barlow KM, Brooks B, Ofoghi Z, Zalesky A, Cocchi L.

Ann Clin Transl Neurol. 2019 Mar 22;6(5):954-961. doi: 10.1002/acn3.764. eCollection 2019 May.


The Impact of Childhood Adversity on Cognitive Development in Schizophrenia.

Wells R, Jacomb I, Swaminathan V, Sundram S, Weinberg D, Bruggemann J, Cropley V, Lenroot RK, Pereira AM, Zalesky A, Bousman C, Pantelis C, Weickert CS, Weickert TW.

Schizophr Bull. 2019 May 3. pii: sbz033. doi: 10.1093/schbul/sbz033. [Epub ahead of print]


Brain network disintegration as a final common pathway for delirium: a systematic review and qualitative meta-analysis.

van Montfort SJT, van Dellen E, Stam CJ, Ahmad AH, Mentink LJ, Kraan CW, Zalesky A, Slooter AJC.

Neuroimage Clin. 2019;23:101809. doi: 10.1016/j.nicl.2019.101809. Epub 2019 Apr 3. Review.


Functional Connectivity of Corticostriatal Circuitry and Psychosis-like Experiences in the General Community.

Sabaroedin K, Tiego J, Parkes L, Sforazzini F, Finlay A, Johnson B, Pinar A, Cropley V, Harrison BJ, Zalesky A, Pantelis C, Bellgrove M, Fornito A.

Biol Psychiatry. 2019 Jul 1;86(1):16-24. doi: 10.1016/j.biopsych.2019.02.013. Epub 2019 Feb 21.


The impact of fasting on resting state brain networks in mice.

Tsurugizawa T, Djemai B, Zalesky A.

Sci Rep. 2019 Feb 27;9(1):2976. doi: 10.1038/s41598-019-39851-6.


Insula Functional Connectivity in Schizophrenia: Subregions, Gradients, and Symptoms.

Tian Y, Zalesky A, Bousman C, Everall I, Pantelis C.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2019 Apr;4(4):399-408. doi: 10.1016/j.bpsc.2018.12.003. Epub 2018 Dec 13.


Subgenual Functional Connectivity Predicts Antidepressant Treatment Response to Transcranial Magnetic Stimulation: Independent Validation and Evaluation of Personalization.

Cash RFH, Zalesky A, Thomson RH, Tian Y, Cocchi L, Fitzgerald PB.

Biol Psychiatry. 2019 Jul 15;86(2):e5-e7. doi: 10.1016/j.biopsych.2018.12.002. Epub 2019 Jan 19. No abstract available.


Brain network dynamics in schizophrenia: Reduced dynamism of the default mode network.

Kottaram A, Johnston LA, Cocchi L, Ganella EP, Everall I, Pantelis C, Kotagiri R, Zalesky A.

Hum Brain Mapp. 2019 May;40(7):2212-2228. doi: 10.1002/hbm.24519. Epub 2019 Jan 21.


Reply to Muscoloni and Cannistraci: Navigation performance measures.

Seguin C, van den Heuvel MP, Zalesky A.

Proc Natl Acad Sci U S A. 2019 Jan 29;116(5):1470. doi: 10.1073/pnas.1820315116. Epub 2019 Jan 10. No abstract available.


Structural connectivity in adolescent synthetic cannabinoid users with and without ADHD.

Çelik ZÇ, Çolak Ç, Di Biase MA, Zalesky A, Zorlu N, Bora E, Kitiş Ö, Yüncü Z.

Brain Imaging Behav. 2019 Jan 7. doi: 10.1007/s11682-018-0023-x. [Epub ahead of print]


Multilayer network switching rate predicts brain performance.

Pedersen M, Zalesky A, Omidvarnia A, Jackson GD.

Proc Natl Acad Sci U S A. 2018 Dec 26;115(52):13376-13381. doi: 10.1073/pnas.1814785115. Epub 2018 Dec 13.


Investigation of peripheral complement factors across stages of psychosis.

Laskaris L, Zalesky A, Weickert CS, Di Biase MA, Chana G, Baune BT, Bousman C, Nelson B, McGorry P, Everall I, Pantelis C, Cropley V.

Schizophr Res. 2019 Feb;204:30-37. doi: 10.1016/j.schres.2018.11.035. Epub 2018 Dec 6.


Mapping connectomes with diffusion MRI: deterministic or probabilistic tractography?

Sarwar T, Ramamohanarao K, Zalesky A.

Magn Reson Med. 2019 Feb;81(2):1368-1384. doi: 10.1002/mrm.27471. Epub 2018 Oct 10.


Exploring the moderating effects of dopaminergic polymorphisms and childhood adversity on brain morphology in schizophrenia-spectrum disorders.

Hoffmann C, Van Rheenen TE, Mancuso SG, Zalesky A, Bruggemann J, Lenroot RK, Sundram S, Weickert CS, Weickert TW, Pantelis C, Cropley V, Bousman CA.

Psychiatry Res Neuroimaging. 2018 Nov 30;281:61-68. doi: 10.1016/j.pscychresns.2018.09.002. Epub 2018 Sep 13.


Vitamin D deficiency is associated with reduced hippocampal volume and disrupted structural connectivity in patients with mild cognitive impairment.

Al-Amin M, Bradford D, Sullivan RKP, Kurniawan ND, Moon Y, Han SH, Zalesky A, Burne THJ.

Hum Brain Mapp. 2019 Feb 1;40(2):394-406. doi: 10.1002/hbm.24380. Epub 2018 Sep 25.


Estimating the impact of structural directionality: How reliable are undirected connectomes?

Kale P, Zalesky A, Gollo LL.

Netw Neurosci. 2018 Jun 1;2(2):259-284. doi: 10.1162/netn_a_00040. eCollection 2018.


Linking Cortical and Connectional Pathology in Schizophrenia.

Di Biase MA, Cropley VL, Cocchi L, Fornito A, Calamante F, Ganella EP, Pantelis C, Zalesky A.

Schizophr Bull. 2019 Jun 18;45(4):911-923. doi: 10.1093/schbul/sby121.


Characterizing the functional connectivity diversity of the insula cortex: Subregions, diversity curves and behavior.

Tian Y, Zalesky A.

Neuroimage. 2018 Dec;183:716-733. doi: 10.1016/j.neuroimage.2018.08.055. Epub 2018 Aug 29.


Computational Approaches to Understanding Mental Dysfunction: Progress, Challenges, and New Frontiers.

Fornito A, Zalesky A.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2018 Sep;3(9):728-730. doi: 10.1016/j.bpsc.2018.07.005. No abstract available.


Fragility and volatility of structural hubs in the human connectome.

Gollo LL, Roberts JA, Cropley VL, Di Biase MA, Pantelis C, Zalesky A, Breakspear M.

Nat Neurosci. 2018 Aug;21(8):1107-1116. doi: 10.1038/s41593-018-0188-z. Epub 2018 Jul 23.


Transcranial magnetic stimulation in obsessive-compulsive disorder: A focus on network mechanisms and state dependence.

Cocchi L, Zalesky A, Nott Z, Whybird G, Fitzgerald PB, Breakspear M.

Neuroimage Clin. 2018 May 23;19:661-674. doi: 10.1016/j.nicl.2018.05.029. eCollection 2018. Review.


White matter microstructure in anorexia nervosa.

Phillipou A, Carruthers SP, Di Biase MA, Zalesky A, Abel LA, Castle DJ, Gurvich C, Rossell SL.

Hum Brain Mapp. 2018 Nov;39(11):4385-4392. doi: 10.1002/hbm.24279. Epub 2018 Jul 2.


Spontaneous brain network activity: Analysis of its temporal complexity.

Pedersen M, Omidvarnia A, Walz JM, Zalesky A, Jackson GD.

Netw Neurosci. 2017 Jun 1;1(2):100-115. doi: 10.1162/NETN_a_00006. eCollection 2017 Spring.


On the relationship between instantaneous phase synchrony and correlation-based sliding windows for time-resolved fMRI connectivity analysis.

Pedersen M, Omidvarnia A, Zalesky A, Jackson GD.

Neuroimage. 2018 Nov 1;181:85-94. doi: 10.1016/j.neuroimage.2018.06.020. Epub 2018 Jun 15.


Navigation of brain networks.

Seguin C, van den Heuvel MP, Zalesky A.

Proc Natl Acad Sci U S A. 2018 Jun 12;115(24):6297-6302. doi: 10.1073/pnas.1801351115. Epub 2018 May 30.


Resting-state functional brain networks in first-episode psychosis: A 12-month follow-up study.

Ganella EP, Seguin C, Pantelis C, Whittle S, Baune BT, Olver J, Amminger GP, McGorry PD, Cropley V, Zalesky A, Bartholomeusz CF.

Aust N Z J Psychiatry. 2018 Sep;52(9):864-875. doi: 10.1177/0004867418775833. Epub 2018 May 27.


Spatio-temporal dynamics of resting-state brain networks improve single-subject prediction of schizophrenia diagnosis.

Kottaram A, Johnston L, Ganella E, Pantelis C, Kotagiri R, Zalesky A.

Hum Brain Mapp. 2018 Sep;39(9):3663-3681. doi: 10.1002/hbm.24202. Epub 2018 May 10.


Personalized Transcranial Magnetic Stimulation in Psychiatry.

Cocchi L, Zalesky A.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2018 Sep;3(9):731-741. doi: 10.1016/j.bpsc.2018.01.008. Epub 2018 Mar 20. Review.


Minimum spanning tree analysis of the human connectome.

van Dellen E, Sommer IE, Bohlken MM, Tewarie P, Draaisma L, Zalesky A, Di Biase M, Brown JA, Douw L, Otte WM, Mandl RCW, Stam CJ.

Hum Brain Mapp. 2018 Jun;39(6):2455-2471. doi: 10.1002/hbm.24014. Epub 2018 Feb 21.


Brain-behavior patterns define a dimensional biotype in medication-naïve adults with attention-deficit hyperactivity disorder.

Lin HY, Cocchi L, Zalesky A, Lv J, Perry A, Tseng WI, Kundu P, Breakspear M, Gau SS.

Psychol Med. 2018 Oct;48(14):2399-2408. doi: 10.1017/S0033291718000028. Epub 2018 Feb 7.


Differential effect of disease-associated ST8SIA2 haplotype on cerebral white matter diffusion properties in schizophrenia and healthy controls.

Fullerton JM, Klauser P, Lenroot RK, Shaw AD, Overs B, Heath A, Cairns MJ, Atkins J, Scott R; Australian Schizophrenia Research Bank, Schofield PR, Weickert CS, Pantelis C, Fornito A, Whitford TJ, Weickert TW, Zalesky A.

Transl Psychiatry. 2018 Jan 22;8(1):21. doi: 10.1038/s41398-017-0052-z.


Rich club and reward network connectivity as endophenotypes for alcohol dependence: a diffusion tensor imaging study.

Zorlu N, Çapraz N, Oztekin E, Bagci B, Di Biase MA, Zalesky A, Gelal F, Bora E, Durmaz E, Beşiroğlu L, Sarıçiçek A.

Addict Biol. 2019 Mar;24(2):265-274. doi: 10.1111/adb.12599. Epub 2017 Dec 27.


Connectome analysis with diffusion MRI in idiopathic Parkinson's disease: Evaluation using multi-shell, multi-tissue, constrained spherical deconvolution.

Kamagata K, Zalesky A, Hatano T, Di Biase MA, El Samad O, Saiki S, Shimoji K, Kumamaru KK, Kamiya K, Hori M, Hattori N, Aoki S, Pantelis C.

Neuroimage Clin. 2017 Nov 10;17:518-529. doi: 10.1016/j.nicl.2017.11.007. eCollection 2018.


Functional architecture of the human brain.

Zalesky A, Keilholz SD, van den Heuvel MP.

Neuroimage. 2017 Oct 15;160:1. doi: 10.1016/j.neuroimage.2017.10.018. No abstract available.


Widespread white matter microstructural differences in schizophrenia across 4322 individuals: results from the ENIGMA Schizophrenia DTI Working Group.

Kelly S, Jahanshad N, Zalesky A, Kochunov P, Agartz I, Alloza C, Andreassen OA, Arango C, Banaj N, Bouix S, Bousman CA, Brouwer RM, Bruggemann J, Bustillo J, Cahn W, Calhoun V, Cannon D, Carr V, Catts S, Chen J, Chen JX, Chen X, Chiapponi C, Cho KK, Ciullo V, Corvin AS, Crespo-Facorro B, Cropley V, De Rossi P, Diaz-Caneja CM, Dickie EW, Ehrlich S, Fan FM, Faskowitz J, Fatouros-Bergman H, Flyckt L, Ford JM, Fouche JP, Fukunaga M, Gill M, Glahn DC, Gollub R, Goudzwaard ED, Guo H, Gur RE, Gur RC, Gurholt TP, Hashimoto R, Hatton SN, Henskens FA, Hibar DP, Hickie IB, Hong LE, Horacek J, Howells FM, Hulshoff Pol HE, Hyde CL, Isaev D, Jablensky A, Jansen PR, Janssen J, Jönsson EG, Jung LA, Kahn RS, Kikinis Z, Liu K, Klauser P, Knöchel C, Kubicki M, Lagopoulos J, Langen C, Lawrie S, Lenroot RK, Lim KO, Lopez-Jaramillo C, Lyall A, Magnotta V, Mandl RCW, Mathalon DH, McCarley RW, McCarthy-Jones S, McDonald C, McEwen S, McIntosh A, Melicher T, Mesholam-Gately RI, Michie PT, Mowry B, Mueller BA, Newell DT, O'Donnell P, Oertel-Knöchel V, Oestreich L, Paciga SA, Pantelis C, Pasternak O, Pearlson G, Pellicano GR, Pereira A, Pineda Zapata J, Piras F, Potkin SG, Preda A, Rasser PE, Roalf DR, Roiz R, Roos A, Rotenberg D, Satterthwaite TD, Savadjiev P, Schall U, Scott RJ, Seal ML, Seidman LJ, Shannon Weickert C, Whelan CD, Shenton ME, Kwon JS, Spalletta G, Spaniel F, Sprooten E, Stäblein M, Stein DJ, Sundram S, Tan Y, Tan S, Tang S, Temmingh HS, Westlye LT, Tønnesen S, Tordesillas-Gutierrez D, Doan NT, Vaidya J, van Haren NEM, Vargas CD, Vecchio D, Velakoulis D, Voineskos A, Voyvodic JQ, Wang Z, Wan P, Wei D, Weickert TW, Whalley H, White T, Whitford TJ, Wojcik JD, Xiang H, Xie Z, Yamamori H, Yang F, Yao N, Zhang G, Zhao J, van Erp TGM, Turner J, Thompson PM, Donohoe G.

Mol Psychiatry. 2018 May;23(5):1261-1269. doi: 10.1038/mp.2017.170. Epub 2017 Oct 17.


Widespread Volumetric Reductions in Schizophrenia and Schizoaffective Patients Displaying Compromised Cognitive Abilities.

Van Rheenen TE, Cropley V, Zalesky A, Bousman C, Wells R, Bruggemann J, Sundram S, Weinberg D, Lenroot RK, Pereira A, Shannon Weickert C, Weickert TW, Pantelis C.

Schizophr Bull. 2018 Apr 6;44(3):560-574. doi: 10.1093/schbul/sbx109.

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