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Items: 25

1.

Noncanonical RNA-capping: Discovery, mechanism, and physiological role debate.

Julius C, Yuzenkova Y.

Wiley Interdiscip Rev RNA. 2019 Mar;10(2):e1512. doi: 10.1002/wrna.1512. Epub 2018 Oct 23. Review.

PMID:
30353673
2.

Mode of Action of Kanglemycin A, an Ansamycin Natural Product that Is Active against Rifampicin-Resistant Mycobacterium tuberculosis.

Mosaei H, Molodtsov V, Kepplinger B, Harbottle J, Moon CW, Jeeves RE, Ceccaroni L, Shin Y, Morton-Laing S, Marrs ECL, Wills C, Clegg W, Yuzenkova Y, Perry JD, Bacon J, Errington J, Allenby NEE, Hall MJ, Murakami KS, Zenkin N.

Mol Cell. 2018 Oct 18;72(2):263-274.e5. doi: 10.1016/j.molcel.2018.08.028. Epub 2018 Sep 20.

3.

RNA capping by mitochondrial and multi-subunit RNA polymerases.

Julius C, Riaz-Bradley A, Yuzenkova Y.

Transcription. 2018;9(5):292-297. doi: 10.1080/21541264.2018.1456258. Epub 2018 Apr 25. Review.

4.

Single-peptide DNA-dependent RNA polymerase homologous to multi-subunit RNA polymerase.

Forrest D, James K, Yuzenkova Y, Zenkin N.

Nat Commun. 2017 Jun 6;8:15774. doi: 10.1038/ncomms15774.

5.

Bacterial RNA polymerase caps RNA with various cofactors and cell wall precursors.

Julius C, Yuzenkova Y.

Nucleic Acids Res. 2017 Aug 21;45(14):8282-8290. doi: 10.1093/nar/gkx452.

6.

Ribonucleoprotein particles of bacterial small non-coding RNA IsrA (IS61 or McaS) and its interaction with RNA polymerase core may link transcription to mRNA fate.

van Nues RW, Castro-Roa D, Yuzenkova Y, Zenkin N.

Nucleic Acids Res. 2016 Apr 7;44(6):2577-92. doi: 10.1093/nar/gkv1302. Epub 2015 Nov 24.

7.

New Insights into the Functions of Transcription Factors that Bind the RNA Polymerase Secondary Channel.

Zenkin N, Yuzenkova Y.

Biomolecules. 2015 Jun 25;5(3):1195-209. doi: 10.3390/biom5031195. Review.

8.

Bacteriophage Xp10 anti-termination factor p7 induces forward translocation by host RNA polymerase.

Zenkin N, Severinov K, Yuzenkova Y.

Nucleic Acids Res. 2015 Jul 27;43(13):6299-308. doi: 10.1093/nar/gkv586. Epub 2015 Jun 1.

9.

Bacterial global regulators DksA/ppGpp increase fidelity of transcription.

Roghanian M, Zenkin N, Yuzenkova Y.

Nucleic Acids Res. 2015 Feb 18;43(3):1529-36. doi: 10.1093/nar/gkv003. Epub 2015 Jan 20.

10.

Control of transcription elongation by GreA determines rate of gene expression in Streptococcus pneumoniae.

Yuzenkova Y, Gamba P, Herber M, Attaiech L, Shafeeq S, Kuipers OP, Klumpp S, Zenkin N, Veening JW.

Nucleic Acids Res. 2014;42(17):10987-99. doi: 10.1093/nar/gku790. Epub 2014 Sep 4.

11.

Optimized delivery of fluorescently labeled proteins in live bacteria using electroporation.

Sustarsic M, Plochowietz A, Aigrain L, Yuzenkova Y, Zenkin N, Kapanidis A.

Histochem Cell Biol. 2014 Jul;142(1):113-24. doi: 10.1007/s00418-014-1213-2. Epub 2014 Apr 3.

12.

Antibiotic streptolydigin requires noncatalytic Mg2+ for binding to RNA polymerase.

Zorov S, Yuzenkova Y, Nikiforov V, Severinov K, Zenkin N.

Antimicrob Agents Chemother. 2014;58(3):1420-4. doi: 10.1128/AAC.02248-13. Epub 2013 Dec 16.

13.

Tagetitoxin inhibits transcription by stabilizing pre-translocated state of the elongation complex.

Yuzenkova Y, Roghanian M, Bochkareva A, Zenkin N.

Nucleic Acids Res. 2013 Nov;41(20):9257-65. doi: 10.1093/nar/gkt708. Epub 2013 Aug 9.

14.

Mechanism of eukaryotic RNA polymerase III transcription termination.

Nielsen S, Yuzenkova Y, Zenkin N.

Science. 2013 Jun 28;340(6140):1577-80. doi: 10.1126/science.1237934.

15.

Multiple active centers of multi-subunit RNA polymerases.

Yuzenkova Y, Roghanian M, Zenkin N.

Transcription. 2012 May-Jun;3(3):115-8. doi: 10.4161/trns.19887.

16.

Factor-independent transcription pausing caused by recognition of the RNA-DNA hybrid sequence.

Bochkareva A, Yuzenkova Y, Tadigotla VR, Zenkin N.

EMBO J. 2012 Feb 1;31(3):630-9. doi: 10.1038/emboj.2011.432. Epub 2011 Nov 29.

17.

A new basal promoter element recognized by RNA polymerase core enzyme.

Yuzenkova Y, Tadigotla VR, Severinov K, Zenkin N.

EMBO J. 2011 Jul 26;30(18):3766-75. doi: 10.1038/emboj.2011.252.

18.

Controlled interplay between trigger loop and Gre factor in the RNA polymerase active centre.

Roghanian M, Yuzenkova Y, Zenkin N.

Nucleic Acids Res. 2011 May;39(10):4352-9. doi: 10.1093/nar/gkq1359. Epub 2011 Jan 25.

19.

Central role of the RNA polymerase trigger loop in intrinsic RNA hydrolysis.

Yuzenkova Y, Zenkin N.

Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10878-83. doi: 10.1073/pnas.0914424107. Epub 2010 Jun 1.

20.

Stepwise mechanism for transcription fidelity.

Yuzenkova Y, Bochkareva A, Tadigotla VR, Roghanian M, Zorov S, Severinov K, Zenkin N.

BMC Biol. 2010 May 7;8:54. doi: 10.1186/1741-7007-8-54.

21.

Mapping of RNA polymerase residues that interact with bacteriophage Xp10 transcription antitermination factor p7.

Yuzenkova Y, Zenkin N, Severinov K.

J Mol Biol. 2008 Jan 4;375(1):29-35. Epub 2007 Oct 25.

22.

Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element.

Zenkin N, Kulbachinskiy A, Yuzenkova Y, Mustaev A, Bass I, Severinov K, Brodolin K.

EMBO J. 2007 Feb 21;26(4):955-64. Epub 2007 Feb 1.

23.

Transcript-assisted transcriptional proofreading.

Zenkin N, Yuzenkova Y, Severinov K.

Science. 2006 Jul 28;313(5786):518-20.

24.
25.

A novel bacteriophage-encoded RNA polymerase binding protein inhibits transcription initiation and abolishes transcription termination by host RNA polymerase.

Nechaev S, Yuzenkova Y, Niedziela-Majka A, Heyduk T, Severinov K.

J Mol Biol. 2002 Jun 28;320(1):11-22.

PMID:
12079331

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