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Items: 15

1.

Algebraic signatures of convex and non-convex codes.

Curto C, Gross E, Jeffries J, Morrison K, Rosen Z, Shiu A, Youngs N.

J Pure Appl Algebra. 2019 Sep;223(9):3919-3940. doi: 10.1016/j.jpaa.2018.12.012. Epub 2018 Dec 14.

PMID:
31534273
2.

Increased Incidence of Noise in the Tendril Pacemaker Lead Detected via Remote Monitoring.

Lovibond S, Youngs N, Kotschet E, Adam D, Antonov A, Mariani JA.

Heart Lung Circ. 2019 Jun 27. pii: S1443-9506(19)31328-9. doi: 10.1016/j.hlc.2019.06.718. [Epub ahead of print]

PMID:
31331672
3.

An adaptive geometric search algorithm for macromolecular scaffold selection.

Jiang T, Renfrew PD, Drew K, Youngs N, Butterfoss GL, Bonneau R, Shasha DN.

Protein Eng Des Sel. 2018 Sep 1;31(9):345-354. doi: 10.1093/protein/gzy028.

4.

Reconciliation feasibility in the presence of gene duplication, loss, and coalescence with multiple individuals per species.

Rogers J, Fishberg A, Youngs N, Wu YC.

BMC Bioinformatics. 2017 Jun 5;18(1):292. doi: 10.1186/s12859-017-1701-1.

5.

An expanded evaluation of protein function prediction methods shows an improvement in accuracy.

Jiang Y, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo da CE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SM, Martelli PL, Profiti G, Casadio R, Cao R, Zhong Z, Cheng J, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Törönen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Bkc D, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang H, Paccanaro A, Gillis J, Sedeño-Cortés AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong Q, Ning W, Zhou Y, Tian W, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SC, Del Pozo A, Fernández JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A, Rehman HU, Re M, Mesiti M, Valentini G, Bargsten JW, van Dijk AD, Gemovic B, Glisic S, Perovic V, Veljkovic V, Veljkovic N, Almeida-E-Silva DC, Vencio RZ, Sharan M, Vogel J, Kansakar L, Zhang S, Vucetic S, Wang Z, Sternberg MJ, Wass MN, Huntley RP, Martin MJ, O'Donovan C, Robinson PN, Moreau Y, Tramontano A, Babbitt PC, Brenner SE, Linial M, Orengo CA, Rost B, Greene CS, Mooney SD, Friedberg I, Radivojac P.

Genome Biol. 2016 Sep 7;17(1):184. doi: 10.1186/s13059-016-1037-6.

6.

Negative example selection for protein function prediction: the NoGO database.

Youngs N, Penfold-Brown D, Bonneau R, Shasha D.

PLoS Comput Biol. 2014 Jun 12;10(6):e1003644. doi: 10.1371/journal.pcbi.1003644. eCollection 2014 Jun.

7.

The neural ring: an algebraic tool for analyzing the intrinsic structure of neural codes.

Curto C, Itskov V, Veliz-Cuba A, Youngs N.

Bull Math Biol. 2013 Sep;75(9):1571-611. doi: 10.1007/s11538-013-9860-3. Epub 2013 Jun 15.

PMID:
23771614
8.

Parametric Bayesian priors and better choice of negative examples improve protein function prediction.

Youngs N, Penfold-Brown D, Drew K, Shasha D, Bonneau R.

Bioinformatics. 2013 May 1;29(9):1190-8. doi: 10.1093/bioinformatics/btt110. Epub 2013 Mar 19.

9.

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

Baltz AG, Munschauer M, Schwanhäusser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M.

Mol Cell. 2012 Jun 8;46(5):674-90. doi: 10.1016/j.molcel.2012.05.021.

10.

Long-term performance of submammary defibrillator system.

Obeyesekere MN, Kamberi S, Youngs N, Alison J.

Europace. 2010 Sep;12(9):1239-44. doi: 10.1093/europace/euq152. Epub 2010 May 17.

PMID:
20478928
11.

Canaliculus reconstruction with homologous vein graft.

Olson JR, Youngs NA.

Am J Ophthalmol. 1966 Oct;62(4):676-7. No abstract available.

PMID:
5929132
12.

Spontaneous cerebrospinal rhinorrhea secondary to the Arnold-Chiari malformation.

YOUNGS NA, PEYTON W.

Laryngoscope. 1953 Mar;63(3):241-8. No abstract available.

PMID:
13036223
13.

Spontaneous cerebrospinal rhinorrhea secondary to the Arnold-Chiari malformation.

YOUNGS NA, PEYTON W.

Trans Am Laryngol Rhinol Otol Soc. 1953;58(57th Meeting):278-85. No abstract available.

PMID:
13146761
14.

Treatment of certain types of deafness by roentgen ray therapy.

YOUNGS NA, WOUTAT PH.

Ann Otol Rhinol Laryngol. 1948 Dec;57(4):984-91. No abstract available.

PMID:
18110038
15.

Suppurative labyrinthitis.

YOUNGS NA, LINDSAY JR.

Ann Otol Rhinol Laryngol. 1946 Mar;55:43-54. No abstract available.

PMID:
21023120

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