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Items: 1 to 50 of 293

1.

International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Rhizobia and Agrobacteria Minutes of the meeting by video conference, 11 July 2018.

de Lajudie P, Young JPW.

Int J Syst Evol Microbiol. 2019 Jun;69(6):1835-1840. doi: 10.1099/ijsem.0.003335. Epub 2019 Mar 12.

PMID:
30860461
2.

Reduced aquaporin-1 transcript expression in colorectal carcinoma is associated with promoter hypermethylation.

Smith E, Tomita Y, Palethorpe HM, Howell S, Nakhjavani M, Townsend AR, Price TJ, Young JP, Hardingham JE.

Epigenetics. 2019 Feb;14(2):158-170. doi: 10.1080/15592294.2019.1580112. Epub 2019 Feb 20.

PMID:
30739527
3.

International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of rhizobia and agrobacteria Minutes of the closed meeting, Granada, 4 September 2017.

de Lajudie PM, Young JPW.

Int J Syst Evol Microbiol. 2018 Oct;68(10):3363-3368. doi: 10.1099/ijsem.0.002974. Epub 2018 Sep 7. No abstract available.

PMID:
30192222
4.

The Purified Extract from the Medicinal Plant Bacopa monnieri, Bacopaside II, Inhibits Growth of Colon Cancer Cells In Vitro by Inducing Cell Cycle Arrest and Apoptosis.

Smith E, Palethorpe HM, Tomita Y, Pei JV, Townsend AR, Price TJ, Young JP, Yool AJ, Hardingham JE.

Cells. 2018 Jul 21;7(7). pii: E81. doi: 10.3390/cells7070081.

5.

Horizontal Transfer of Symbiosis Genes within and Between Rhizobial Genera: Occurrence and Importance.

Andrews M, De Meyer S, James EK, Stępkowski T, Hodge S, Simon MF, Young JPW.

Genes (Basel). 2018 Jun 27;9(7). pii: E321. doi: 10.3390/genes9070321. Review.

6.

Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies.

Alessi AM, Bird SM, Oates NC, Li Y, Dowle AA, Novotny EH, deAzevedo ER, Bennett JP, Polikarpov I, Young JPW, McQueen-Mason SJ, Bruce NC.

Biotechnol Biofuels. 2018 Jun 18;11:166. doi: 10.1186/s13068-018-1164-2. eCollection 2018.

7.

Coordinated regulation of core and accessory genes in the multipartite genome of Sinorhizobium fredii.

Jiao J, Ni M, Zhang B, Zhang Z, Young JPW, Chan TF, Chen WX, Lam HM, Tian CF.

PLoS Genet. 2018 May 24;14(5):e1007428. doi: 10.1371/journal.pgen.1007428. eCollection 2018 May.

8.

The Aquaporin 1 Inhibitor Bacopaside II Reduces Endothelial Cell Migration and Tubulogenesis and Induces Apoptosis.

Palethorpe HM, Tomita Y, Smith E, Pei JV, Townsend AR, Price TJ, Young JP, Yool AJ, Hardingham JE.

Int J Mol Sci. 2018 Feb 26;19(3). pii: E653. doi: 10.3390/ijms19030653.

9.

Differences in Perceptions of and Practices Regarding Treatment of Alcohol Use Disorders Among VA Primary Care Providers in Urban and Rural Clinics.

Young JP, Achtmeyer CE, Bensley KM, Hawkins EJ, Williams EC.

J Rural Health. 2018 Sep;34(4):359-368. doi: 10.1111/jrh.12293. Epub 2018 Jan 23.

PMID:
29363176
10.

Serrated polyposis: the problem of definition and its relationship to the population at risk for syndrome-related colorectal cancer.

Young JP, Price TJ, Parry S.

Transl Cancer Res. 2017 Dec;6(Suppl 9):S1480-S1483. doi: 10.21037/tcr.2017.11.16. No abstract available.

11.

Barriers to and Facilitators of Alcohol Use Disorder Pharmacotherapy in Primary Care: A Qualitative Study in Five VA Clinics.

Williams EC, Achtmeyer CE, Young JP, Berger D, Curran G, Bradley KA, Richards J, Siegel MB, Ludman EJ, Lapham GT, Forehand M, Harris AHS.

J Gen Intern Med. 2018 Mar;33(3):258-267. doi: 10.1007/s11606-017-4202-z. Epub 2017 Oct 30.

12.

International Committee on Systematics of Prokaryotes Subcommittee for the Taxonomy of Rhizobium and Agrobacterium Minutes of the meeting, Budapest, 25 August 2016.

de Lajudie PM, Young JPW.

Int J Syst Evol Microbiol. 2017 Jul;67(7):2485-2494. doi: 10.1099/ijsem.0.002144. Epub 2017 Aug 4. No abstract available.

13.

Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi.

Vasar M, Andreson R, Davison J, Jairus T, Moora M, Remm M, Young JPW, Zobel M, Öpik M.

Mycorrhiza. 2017 Nov;27(8):761-773. doi: 10.1007/s00572-017-0791-y. Epub 2017 Jul 20.

14.

Fibroblasts derived from oesophageal adenocarcinoma differ in DNA methylation profile from normal oesophageal fibroblasts.

Smith E, Palethorpe HM, Hayden AL, Young JP, Underwood TJ, Drew PA.

Sci Rep. 2017 Jun 13;7(1):3368. doi: 10.1038/s41598-017-03501-6.

15.

Revealing the insoluble metasecretome of lignocellulose-degrading microbial communities.

Alessi AM, Bird SM, Bennett JP, Oates NC, Li Y, Dowle AA, Polikarpov I, Young JPW, McQueen-Mason SJ, Bruce NC.

Sci Rep. 2017 May 24;7(1):2356. doi: 10.1038/s41598-017-02506-5.

16.

Findings in young adults at colonoscopy from a hospital service database audit.

Wong S, Lidums I, Rosty C, Ruszkiewicz A, Parry S, Win AK, Tomita Y, Vatandoust S, Townsend A, Patel D, Hardingham JE, Roder D, Smith E, Drew P, Marker J, Uylaki W, Hewett P, Worthley DL, Symonds E, Young GP, Price TJ, Young JP.

BMC Gastroenterol. 2017 Apr 19;17(1):56. doi: 10.1186/s12876-017-0612-y.

17.

Reducing the polyp burden in serrated polyposis by serial colonoscopy: the impact of nationally coordinated community surveillance.

Parry S, Burt RW, Win AK, Aung YK, Woodall S, Arnold J, Clendenning M, Buchanan DD, Price TJ, Rosty C, Young JP.

N Z Med J. 2017 Mar 3;130(1451):57-67.

PMID:
28253245
18.

Primary Care Providers' Interest in Using a Genetic Test to Guide Alcohol Use Disorder Treatment.

Williams EC, Young JP, Achtmeyer CE, Hendershot CS.

J Subst Abuse Treat. 2016 Nov;70:14-20. doi: 10.1016/j.jsat.2016.07.009. Epub 2016 Jul 30.

PMID:
27692183
19.

Bacteria Are Smartphones and Mobile Genes Are Apps.

Young JPW.

Trends Microbiol. 2016 Dec;24(12):931-932. doi: 10.1016/j.tim.2016.09.002. Epub 2016 Sep 24.

20.

Risk of extracolonic cancers for people with biallelic and monoallelic mutations in MUTYH.

Win AK, Reece JC, Dowty JG, Buchanan DD, Clendenning M, Rosty C, Southey MC, Young JP, Cleary SP, Kim H, Cotterchio M, Macrae FA, Tucker KM, Baron JA, Burnett T, Le Marchand L, Casey G, Haile RW, Newcomb PA, Thibodeau SN, Hopper JL, Gallinger S, Winship IM, Lindor NM, Jenkins MA.

Int J Cancer. 2016 Oct 1;139(7):1557-63. doi: 10.1002/ijc.30197. Epub 2016 Jun 2. Erratum in: Int J Cancer. 2017 Dec 15;141(12 ):E7.

21.

Multivitamin, calcium and folic acid supplements and the risk of colorectal cancer in Lynch syndrome.

Chau R, Dashti SG, Ait Ouakrim D, Buchanan DD, Clendenning M, Rosty C, Winship IM, Young JP, Giles GG, Macrae FA, Boussioutas A, Parry S, Figueiredo JC, Levine AJ, Ahnen DJ, Casey G, Haile RW, Gallinger S, Le Marchand L, Thibodeau SN, Lindor NM, Newcomb PA, Potter JD, Baron JA, Hopper JL, Jenkins MA, Win AK.

Int J Epidemiol. 2016 Jun;45(3):940-53. doi: 10.1093/ije/dyw036. Epub 2016 Apr 10.

22.

Germline mutations in PMS2 and MLH1 in individuals with solitary loss of PMS2 expression in colorectal carcinomas from the Colon Cancer Family Registry Cohort.

Rosty C, Clendenning M, Walsh MD, Eriksen SV, Southey MC, Winship IM, Macrae FA, Boussioutas A, Poplawski NK, Parry S, Arnold J, Young JP, Casey G, Haile RW, Gallinger S, Le Marchand L, Newcomb PA, Potter JD, DeRycke M, Lindor NM, Thibodeau SN, Baron JA, Win AK, Hopper JL, Jenkins MA, Buchanan DD; Colon Cancer Family Registry Cohort.

BMJ Open. 2016 Feb 19;6(2):e010293. doi: 10.1136/bmjopen-2015-010293.

23.

Promoter methylation of ITF2, but not APC, is associated with microsatellite instability in two populations of colorectal cancer patients.

Savio AJ, Daftary D, Dicks E, Buchanan DD, Parfrey PS, Young JP, Weisenberger D, Green RC, Gallinger S, McLaughlin JR, Knight JA, Bapat B.

BMC Cancer. 2016 Feb 17;16:113. doi: 10.1186/s12885-016-2149-9.

24.

Racial/Ethnic Differences in the Prevalence of Clinically Recognized Alcohol Use Disorders Among Patients from the U.S. Veterans Health Administration.

Williams EC, Gupta S, Rubinsky AD, Jones-Webb R, Bensley KM, Young JP, Hagedorn H, Gifford E, Harris AH.

Alcohol Clin Exp Res. 2016 Feb;40(2):359-66. doi: 10.1111/acer.12950.

PMID:
26842254
25.

Human intestinal spirochetosis and its relationship to sessile serrated adenomas in an Australian population.

Young JP, Price TJ, Moore J, Ruszkiewicz AR.

Pathol Res Pract. 2016 Aug;212(8):751-3. doi: 10.1016/j.prp.2015.08.011. Epub 2015 Sep 8. No abstract available.

PMID:
26839160
26.

Symbiosis within Symbiosis: Evolving Nitrogen-Fixing Legume Symbionts.

Remigi P, Zhu J, Young JPW, Masson-Boivin C.

Trends Microbiol. 2016 Jan;24(1):63-75. doi: 10.1016/j.tim.2015.10.007. Epub 2015 Nov 21. Review.

PMID:
26612499
27.

Bradyrhizobium guangdongense sp. nov. and Bradyrhizobium guangxiense sp. nov., isolated from effective nodules of peanut.

Li YH, Wang R, Zhang XX, Young JP, Wang ET, Sui XH, Chen WX.

Int J Syst Evol Microbiol. 2015 Dec;65(12):4655-61. doi: 10.1099/ijsem.0.000629. Epub 2015 Sep 23.

PMID:
26409482
28.

Randomized Trial of Communication Facilitators to Reduce Family Distress and Intensity of End-of-Life Care.

Curtis JR, Treece PD, Nielsen EL, Gold J, Ciechanowski PS, Shannon SE, Khandelwal N, Young JP, Engelberg RA.

Am J Respir Crit Care Med. 2016 Jan 15;193(2):154-62. doi: 10.1164/rccm.201505-0900OC.

29.

Metastatic Colorectal Cancer in Young Adults: A Study From the South Australian Population-Based Registry.

Vatandoust S, Price TJ, Ullah S, Roy AC, Beeke C, Young JP, Townsend A, Padbury R, Roder D, Karapetis CS.

Clin Colorectal Cancer. 2016 Mar;15(1):32-6. doi: 10.1016/j.clcc.2015.07.005. Epub 2015 Jul 30.

PMID:
26341410
30.

Local Implementation of Alcohol Screening and Brief Intervention at Five Veterans Health Administration Primary Care Clinics: Perspectives of Clinical and Administrative Staff.

Williams EC, Achtmeyer CE, Young JP, Rittmueller SE, Ludman EJ, Lapham GT, Lee AK, Chavez LJ, Berger D, Bradley KA.

J Subst Abuse Treat. 2016 Jan;60:27-35. doi: 10.1016/j.jsat.2015.07.011. Epub 2015 Jul 26.

PMID:
26297322
31.

Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts.

Bontemps C, Rogel MA, Wiechmann A, Mussabekova A, Moody S, Simon MF, Moulin L, Elliott GN, Lacercat-Didier L, Dasilva C, Grether R, Camargo-Ricalde SL, Chen W, Sprent JI, Martínez-Romero E, Young JP, James EK.

New Phytol. 2016 Jan;209(1):319-33. doi: 10.1111/nph.13573. Epub 2015 Jul 27.

32.

Risk of colorectal cancer for people with a mutation in both a MUTYH and a DNA mismatch repair gene.

Win AK, Reece JC, Buchanan DD, Clendenning M, Young JP, Cleary SP, Kim H, Cotterchio M, Dowty JG, MacInnis RJ, Tucker KM, Winship IM, Macrae FA, Burnett T, Le Marchand L, Casey G, Haile RW, Newcomb PA, Thibodeau SN, Lindor NM, Hopper JL, Gallinger S, Jenkins MA.

Fam Cancer. 2015 Dec;14(4):575-83. doi: 10.1007/s10689-015-9824-x.

33.

Genome diversity in arbuscular mycorrhizal fungi.

Young JP.

Curr Opin Plant Biol. 2015 Aug;26:113-9. doi: 10.1016/j.pbi.2015.06.005. Epub 2015 Jul 17. Review.

PMID:
26190590
34.

Female Hormonal Factors and the Risk of Endometrial Cancer in Lynch Syndrome.

Dashti SG, Chau R, Ouakrim DA, Buchanan DD, Clendenning M, Young JP, Winship IM, Arnold J, Ahnen DJ, Haile RW, Casey G, Gallinger S, Thibodeau SN, Lindor NM, Le Marchand L, Newcomb PA, Potter JD, Baron JA, Hopper JL, Jenkins MA, Win AK.

JAMA. 2015 Jul 7;314(1):61-71. doi: 10.1001/jama.2015.6789.

35.

Aspirin, Ibuprofen, and the Risk of Colorectal Cancer in Lynch Syndrome.

Ait Ouakrim D, Dashti SG, Chau R, Buchanan DD, Clendenning M, Rosty C, Winship IM, Young JP, Giles GG, Leggett B, Macrae FA, Ahnen DJ, Casey G, Gallinger S, Haile RW, Le Marchand L, Thibodeau SN, Lindor NM, Newcomb PA, Potter JD, Baron JA, Hopper JL, Jenkins MA, Win AK.

J Natl Cancer Inst. 2015 Jun 24;107(9). pii: djv170. doi: 10.1093/jnci/djv170. Print 2015 Sep.

36.

The intestinal epithelial cell differentiation marker intestinal alkaline phosphatase (ALPi) is selectively induced by histone deacetylase inhibitors (HDACi) in colon cancer cells in a Kruppel-like factor 5 (KLF5)-dependent manner.

Shin J, Carr A, Corner GA, Tögel L, Dávalos-Salas M, Tran H, Chueh AC, Al-Obaidi S, Chionh F, Ahmed N, Buchanan DD, Young JP, Malo MS, Hodin RA, Arango D, Sieber OM, Augenlicht LH, Dhillon AS, Weber TK, Mariadason JM.

J Biol Chem. 2015 Jun 19;290(25):15392. doi: 10.1074/jbc.A114.557546. No abstract available.

37.

Lynch syndrome and cervical cancer.

Antill YC, Dowty JG, Win AK, Thompson T, Walsh MD, Cummings MC, Gallinger S, Lindor NM, Le Marchand L, Hopper JL, Newcomb PA, Haile RW, Church J, Tucker KM, Buchanan DD, Young JP, Winship IM, Jenkins MA.

Int J Cancer. 2015 Dec 1;137(11):2757-61. doi: 10.1002/ijc.29641. Epub 2015 Jul 14.

38.

Average nucleotide identity of genome sequences supports the description of Rhizobium lentis sp. nov., Rhizobium bangladeshense sp. nov. and Rhizobium binae sp. nov. from lentil (Lens culinaris) nodules.

Rashid MH, Young JP, Everall I, Clercx P, Willems A, Santhosh Braun M, Wink M.

Int J Syst Evol Microbiol. 2015 Sep;65(9):3037-45. doi: 10.1099/ijs.0.000373. Epub 2015 Jun 8.

PMID:
26060217
39.

Rhizobium anhuiense sp. nov., isolated from effective nodules of Vicia faba and Pisum sativum.

Zhang YJ, Zheng WT, Everall I, Young JP, Zhang XX, Tian CF, Sui XH, Wang ET, Chen WX.

Int J Syst Evol Microbiol. 2015 Sep;65(9):2960-7. doi: 10.1099/ijs.0.000365. Epub 2015 May 29.

PMID:
26025940
40.

Bacterial genospecies that are not ecologically coherent: population genomics of Rhizobium leguminosarum.

Kumar N, Lad G, Giuntini E, Kaye ME, Udomwong P, Shamsani NJ, Young JP, Bailly X.

Open Biol. 2015 Jan;5(1):140133. doi: 10.1098/rsob.140133.

41.

Association of the colorectal CpG island methylator phenotype with molecular features, risk factors, and family history.

Weisenberger DJ, Levine AJ, Long TI, Buchanan DD, Walters R, Clendenning M, Rosty C, Joshi AD, Stern MC, LeMarchand L, Lindor NM, Daftary D, Gallinger S, Selander T, Bapat B, Newcomb PA, Campbell PT, Casey G, Ahnen DJ, Baron JA, Haile RW, Hopper JL, Young JP, Laird PW, Siegmund KD; Colon Cancer Family Registry.

Cancer Epidemiol Biomarkers Prev. 2015 Mar;24(3):512-519. doi: 10.1158/1055-9965.EPI-14-1161. Epub 2015 Jan 13.

42.

Structural determination and gas-phase synthesis of monomeric, unsolvated IZnCH3 (X̃(1)A(1)): a model organozinc halide.

Bucchino MP, Young JP, Sheridan PM, Ziurys LM.

J Phys Chem A. 2014 Nov 26;118(47):11204-10. doi: 10.1021/jp507926x. Epub 2014 Nov 12.

PMID:
25424558
43.

Characterization of arbuscular mycorrhizal fungus communities of Aquilaria crassna and Tectona grandis roots and soils in Thailand plantations.

Chaiyasen A, Young JP, Teaumroong N, Gavinlertvatana P, Lumyong S.

PLoS One. 2014 Nov 14;9(11):e112591. doi: 10.1371/journal.pone.0112591. eCollection 2014.

44.

Rising incidence of early-onset colorectal cancer in Australia over two decades: report and review.

Young JP, Win AK, Rosty C, Flight I, Roder D, Young GP, Frank O, Suthers GK, Hewett PJ, Ruszkiewicz A, Hauben E, Adelstein BA, Parry S, Townsend A, Hardingham JE, Price TJ.

J Gastroenterol Hepatol. 2015 Jan;30(1):6-13. doi: 10.1111/jgh.12792. Review.

PMID:
25251195
45.

Complete Genome sequence of Burkholderia phymatum STM815(T), a broad host range and efficient nitrogen-fixing symbiont of Mimosa species.

Moulin L, Klonowska A, Caroline B, Booth K, Vriezen JA, Melkonian R, James EK, Young JP, Bena G, Hauser L, Land M, Kyrpides N, Bruce D, Chain P, Copeland A, Pitluck S, Woyke T, Lizotte-Waniewski M, Bristow J, Riley M.

Stand Genomic Sci. 2014 Mar 25;9(3):763-74. doi: 10.4056/sigs.4861021. eCollection 2014 Jun 15.

46.

High prevalence of mismatch repair deficiency in prostate cancers diagnosed in mismatch repair gene mutation carriers from the colon cancer family registry.

Rosty C, Walsh MD, Lindor NM, Thibodeau SN, Mundt E, Gallinger S, Aronson M, Pollett A, Baron JA, Pearson S, Clendenning M, Walters RJ, Nagler BN, Crawford WJ, Young JP, Winship I, Win AK, Hopper JL, Jenkins MA, Buchanan DD.

Fam Cancer. 2014 Dec;13(4):573-82. doi: 10.1007/s10689-014-9744-1.

47.

Safety of celecoxib and nonselective nonsteroidal anti-inflammatory drugs in juvenile idiopathic arthritis: results of the Phase 4 registry.

Sobel RE, Lovell DJ, Brunner HI, Weiss JE, Morris PW, Gottlieb BS, Chalom EC, Jung LK, Onel KB, Petiniot L, Goldsmith DP, Nanda K, Shishov M, Abramsky S, Young JP, Giannini EH; Pediatric Rheumatology Collaborative Study Group.

Pediatr Rheumatol Online J. 2014 Jul 16;12:29. doi: 10.1186/1546-0096-12-29. eCollection 2014.

48.

The intestinal epithelial cell differentiation marker intestinal alkaline phosphatase (ALPi) is selectively induced by histone deacetylase inhibitors (HDACi) in colon cancer cells in a Kruppel-like factor 5 (KLF5)-dependent manner.

Shin J, Carr A, Corner GA, Tögel L, Dávalos-Salas M, Tran H, Chueh AC, Al-Obaidi S, Chionh F, Ahmed N, Buchanan DD, Young JP, Malo MS, Hodin RA, Arango D, Sieber OM, Augenlicht LH, Dhillon AS, Weber TK, Mariadason JM.

J Biol Chem. 2014 Sep 5;289(36):25306-16. doi: 10.1074/jbc.M114.557546. Epub 2014 Jul 18. Erratum in: J Biol Chem. 2015 Jun 19;290(25):15392. Dávaos-Salas, Mercedes [Corrected to Dávalos-Salas, Mercedes].

49.

Genome sequencing of two Neorhizobium galegae strains reveals a noeT gene responsible for the unusual acetylation of the nodulation factors.

Österman J, Marsh J, Laine PK, Zeng Z, Alatalo E, Sullivan JT, Young JP, Thomas-Oates J, Paulin L, Lindström K.

BMC Genomics. 2014 Jun 19;15:500. doi: 10.1186/1471-2164-15-500.

50.

Reply to J. Moline et al.

Buchanan DD, Tan YY, Walsh MD, Clendenning M, Metcalf AM, Ferguson K, Arnold ST, Thompson BA, Lose FA, Parsons MT, Walters RJ, Pearson SA, Cummings M, Oehler MK, Blomfield PB, Quinn MA, Kirk JA, Stewart CJ, Obermair A, Young JP, Webb PM, Spurdle AB.

J Clin Oncol. 2014 Jul 20;32(21):2278-9. doi: 10.1200/JCO.2014.55.8213. Epub 2014 Jun 9. No abstract available.

PMID:
24912891

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