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Items: 30

1.

Utah optrode array customization using stereotactic brain atlases and 3-D CAD modeling for optogenetic neocortical interrogation in small rodents and nonhuman primates.

Boutte RW, Merlin S, Yona G, Griffiths B, Angelucci A, Kahn I, Shoham S, Blair S.

Neurophotonics. 2017 Oct;4(4):041502. doi: 10.1117/1.NPh.4.4.041502. Epub 2017 Jul 12.

2.

Realistic Numerical and Analytical Modeling of Light Scattering in Brain Tissue for Optogenetic Applications(1,2,3).

Yona G, Meitav N, Kahn I, Shoham S.

eNeuro. 2016 Feb 2;3(1). pii: ENEURO.0059-15.2015. doi: 10.1523/ENEURO.0059-15.2015. eCollection 2016 Jan-Feb.

3.

The human genome contracts again.

Pavlichin DS, Weissman T, Yona G.

Bioinformatics. 2013 Sep 1;29(17):2199-202. doi: 10.1093/bioinformatics/btt362. Epub 2013 Jun 22.

PMID:
23793748
4.

QualComp: a new lossy compressor for quality scores based on rate distortion theory.

Ochoa I, Asnani H, Bharadia D, Chowdhury M, Weissman T, Yona G.

BMC Bioinformatics. 2013 Jun 8;14:187. doi: 10.1186/1471-2105-14-187.

5.

Immature myeloid cells derived from mouse placentas and malignant tumors demonstrate similar proangiogenic transcriptional signatures.

Fainaru O, Pencovich N, Hantisteanu S, Yona G, Hallak M.

Fertil Steril. 2013 Mar 1;99(3):910-917.e2. doi: 10.1016/j.fertnstert.2012.11.018. Epub 2012 Dec 7.

PMID:
23219012
6.

Enzyme function prediction with interpretable models.

Syed U, Yona G.

Methods Mol Biol. 2009;541:373-420. doi: 10.1007/978-1-59745-243-4_17. Review.

PMID:
19381539
7.

Comparing algorithms for clustering of expression data: how to assess gene clusters.

Yona G, Dirks W, Rahman S.

Methods Mol Biol. 2009;541:479-509. doi: 10.1007/978-1-59745-243-4_21. Review.

PMID:
19381534
8.

Prediction of protein-protein interactions: a study of the co-evolution model.

Sharon I, Davis JV, Yona G.

Methods Mol Biol. 2009;541:61-88. doi: 10.1007/978-1-59745-243-4_4. Review.

PMID:
19381529
9.

Protein domain prediction.

Ingolfsson H, Yona G.

Methods Mol Biol. 2008;426:117-43. doi: 10.1007/978-1-60327-058-8_7.

PMID:
18542860
10.

Novel subdomains of the mouse olfactory bulb defined by molecular heterogeneity in the nascent external plexiform and glomerular layers.

Williams EO, Xiao Y, Sickles HM, Shafer P, Yona G, Yang JY, Lin DM.

BMC Dev Biol. 2007 May 16;7:48.

11.

Expectation-maximization algorithms for fuzzy assignment of genes to cellular pathways.

Popescu L, Yona G.

Comput Syst Bioinformatics Conf. 2006:281-91.

12.

Effective similarity measures for expression profiles.

Yona G, Dirks W, Rahman S, Lin DM.

Bioinformatics. 2006 Jul 1;22(13):1616-22. Epub 2006 Apr 4.

PMID:
16595558
13.

EST2Prot: mapping EST sequences to proteins.

Shafer P, Lin DM, Yona G.

BMC Genomics. 2006 Mar 4;7:41.

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BIOZON: a hub of heterogeneous biological data.

Birkland A, Yona G.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D235-42.

18.

Correcting BLAST e-values for low-complexity segments.

Sharon I, Birkland A, Chang K, El-Yaniv R, Yona G.

J Comput Biol. 2005 Sep;12(7):980-1003.

PMID:
16201917
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Automatic prediction of protein domains from sequence information using a hybrid learning system.

Nagarajan N, Yona G.

Bioinformatics. 2004 Jun 12;20(9):1335-60. Epub 2004 Feb 12.

PMID:
14962932
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25.

Methodologies for target selection in structural genomics.

Linial M, Yona G.

Prog Biophys Mol Biol. 2000;73(5):297-320. Review.

PMID:
11063777
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27.

ProtoMap: automatic classification of protein sequences and hierarchy of protein families.

Yona G, Linial N, Linial M.

Nucleic Acids Res. 2000 Jan 1;28(1):49-55.

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A map of the protein space--an automatic hierarchical classification of all protein sequences.

Yona G, Linial N, Tishby N, Linial M.

Proc Int Conf Intell Syst Mol Biol. 1998;6:212-21.

PMID:
9783227
30.

Global self-organization of all known protein sequences reveals inherent biological signatures.

Linial M, Linial N, Tishby N, Yona G.

J Mol Biol. 1997 May 2;268(2):539-56.

PMID:
9159489

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