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Items: 46

1.

Prevalence, clinical features and treatment pattern of patients with concurrent diagnoses of rheumatoid arthritis and psoriatic disease: results of a 14-year retrospective study in a tertiary referral center.

Chen KL, Chiu HY, Lin JH, Ye JD, Cho YH, Li KJ, Tsai TF.

Ther Adv Chronic Dis. 2019 May 13;10:2040622319847900. doi: 10.1177/2040622319847900. eCollection 2019.

PMID:
31205646
2.

Bacillus pumilus SE5 originated PG and LTA tuned the intestinal TLRs/MyD88 signaling and microbiota in grouper (Epinephelus coioides).

Yang HL, Sun YZ, Hu X, Ye JD, Lu KL, Hu LH, Zhang JJ.

Fish Shellfish Immunol. 2019 May;88:266-271. doi: 10.1016/j.fsi.2019.03.005. Epub 2019 Mar 5.

PMID:
30849499
3.

Abnormal Gray Matter Structural Networks in Idiopathic Normal Pressure Hydrocephalus.

Yin LK, Zheng JJ, Tian JQ, Hao XZ, Li CC, Ye JD, Zhang YX, Yu H, Yang YM.

Front Aging Neurosci. 2018 Nov 15;10:356. doi: 10.3389/fnagi.2018.00356. eCollection 2018.

4.

Comparison of single and tandem ureteral stenting for malignant ureteral obstruction: a prospective study of 104 patients.

Liu KL, Lee BC, Ye JD, Chang YH, Chang CC, Huang KH, Lee YJ, Chang YC.

Eur Radiol. 2019 Feb;29(2):628-635. doi: 10.1007/s00330-018-5560-6. Epub 2018 Jul 4.

PMID:
29974220
5.

Effect on Chest Deformation of Simultaneous Correction of Pectus Excavatum with Scoliosis.

Ye JD, Lu GP, Feng JJ, Zhong WH.

J Healthc Eng. 2017;2017:8318694. doi: 10.1155/2017/8318694. Epub 2017 Sep 12.

6.

Tumor invasiveness defined by IASLC/ATS/ERS classification of ground-glass nodules can be predicted by quantitative CT parameters.

Zhou QJ, Zheng ZC, Zhu YQ, Lu PJ, Huang J, Ye JD, Zhang J, Lu S, Luo QQ.

J Thorac Dis. 2017 May;9(5):1190-1200. doi: 10.21037/jtd.2017.03.170.

7.

On mechanical mechanism of damage evolution in articular cartilage.

Men YT, Jiang YL, Chen L, Zhang CQ, Ye JD.

Mater Sci Eng C Mater Biol Appl. 2017 Sep 1;78:79-87. doi: 10.1016/j.msec.2017.03.289. Epub 2017 Apr 1.

PMID:
28576051
8.

An injectable, biodegradable calcium phosphate cement containing poly lactic-co-glycolic acid as a bone substitute in ex vivo human vertebral compression fracture and rabbit bone defect models.

Duan X, Liao HX, Zou HZ, Zhang ZJ, Ye JD, Liao WM.

Connect Tissue Res. 2018 Jan;59(1):55-65. doi: 10.1080/03008207.2017.1301932. Epub 2017 Apr 18.

PMID:
28267379
9.

Correction: Preserving Posterior Complex Can Prevent Adjacent Segment Disease following Posterior Lumbar Interbody Fusion Surgeries: A Finite Element Analysis.

Huang YP, Du CF, Cheng CK, Zhong ZC, Chen XW, Wu G, Li ZC, Ye JD, Lin JH, Wang LZ.

PLoS One. 2017 Feb 13;12(2):e0172329. doi: 10.1371/journal.pone.0172329. eCollection 2017.

10.

Preserving Posterior Complex Can Prevent Adjacent Segment Disease following Posterior Lumbar Interbody Fusion Surgeries: A Finite Element Analysis.

Huang YP, Du CF, Cheng CK, Zhong ZC, Chen XW, Wu G, Li ZC, Ye JD, Lin JH, Wang LZ.

PLoS One. 2016 Nov 21;11(11):e0166452. doi: 10.1371/journal.pone.0166452. eCollection 2016. Erratum in: PLoS One. 2017 Feb 13;12 (2):e0172329.

11.

Conformational Flexibility and Dynamics of the Internal Loop and Helical Regions of the Kink-Turn Motif in the Glycine Riboswitch by Site-Directed Spin-Labeling.

Esquiaqui JM, Sherman EM, Ye JD, Fanucci GE.

Biochemistry. 2016 Aug 9;55(31):4295-305. doi: 10.1021/acs.biochem.6b00287. Epub 2016 Jul 29.

PMID:
27427937
12.

Using air bronchograms on multi-detector CT to predict the invasiveness of small lung adenocarcinoma.

Zhang Y, Qiang JW, Shen Y, Ye JD, Zhang J, Zhu L.

Eur J Radiol. 2016 Mar;85(3):571-7. doi: 10.1016/j.ejrad.2015.12.014. Epub 2015 Dec 23.

PMID:
26860669
13.

HRCT features distinguishing pre-invasive from invasive pulmonary adenocarcinomas appearing as ground-glass nodules.

Zhang Y, Shen Y, Qiang JW, Ye JD, Zhang J, Zhao RY.

Eur Radiol. 2016 Sep;26(9):2921-8. doi: 10.1007/s00330-015-4131-3. Epub 2015 Dec 11.

PMID:
26662263
14.

Bactericidal Antibiotics Induce Toxic Metabolic Perturbations that Lead to Cellular Damage.

Belenky P, Ye JD, Porter CB, Cohen NR, Lobritz MA, Ferrante T, Jain S, Korry BJ, Schwarz EG, Walker GC, Collins JJ.

Cell Rep. 2015 Nov 3;13(5):968-80. doi: 10.1016/j.celrep.2015.09.059. Epub 2015 Oct 22.

15.

Fab Chaperone-Assisted RNA Crystallography (Fab CARC).

Sherman E, Archer J, Ye JD.

Methods Mol Biol. 2016;1320:77-109. doi: 10.1007/978-1-4939-2763-0_7.

PMID:
26227039
16.

Site-directed spin-labeling strategies and electron paramagnetic resonance spectroscopy for large riboswitches.

Esquiaqui JM, Sherman EM, Ye JD, Fanucci GE.

Methods Enzymol. 2014;549:287-311. doi: 10.1016/B978-0-12-801122-5.00013-1.

PMID:
25432754
17.

Erratum for "Specific RNA-Binding Antibodies with a Four-Amino-Acid Code" [J. Mol. Biol.426 (2014) 2145-2157].

Sherman EM, Holmes S, Ye JD.

J Mol Biol. 2014 Sep 23;426(19):3325. doi: 10.1016/j.jmb.2014.07.008. Epub 2014 Aug 10. No abstract available.

PMID:
28888277
18.

DNA-rescuable allosteric inhibition of aptamer II ligand affinity by aptamer I element in the shortened Vibrio cholerae glycine riboswitch.

Sherman EM, Elsayed G, Esquiaqui JM, Elsayed M, Brinda B, Ye JD.

J Biochem. 2014 Dec;156(6):323-31. doi: 10.1093/jb/mvu048. Epub 2014 Aug 4.

19.

Growth, Feed Utilization and Blood Metabolic Responses to Different Amylose-amylopectin Ratio Fed Diets in Tilapia (Oreochromis niloticus).

Chen MY, Ye JD, Yang W, Wang K.

Asian-Australas J Anim Sci. 2013 Aug;26(8):1160-71. doi: 10.5713/ajas.2013.13022.

20.

Characterizing the dynamics of the leader-linker interaction in the glycine riboswitch with site-directed spin labeling.

Esquiaqui JM, Sherman EM, Ionescu SA, Ye JD, Fanucci GE.

Biochemistry. 2014 Jun 10;53(22):3526-8. doi: 10.1021/bi500404b. Epub 2014 May 28.

21.

Antibiotics induce redox-related physiological alterations as part of their lethality.

Dwyer DJ, Belenky PA, Yang JH, MacDonald IC, Martell JD, Takahashi N, Chan CT, Lobritz MA, Braff D, Schwarz EG, Ye JD, Pati M, Vercruysse M, Ralifo PS, Allison KR, Khalil AS, Ting AY, Walker GC, Collins JJ.

Proc Natl Acad Sci U S A. 2014 May 20;111(20):E2100-9. doi: 10.1073/pnas.1401876111. Epub 2014 May 6.

22.

Effects of dietary amylose/amylopectin ratio on growth performance, feed utilization, digestive enzymes, and postprandial metabolic responses in juvenile obscure puffer Takifugu obscurus.

Liu XH, Ye CX, Ye JD, Shen BD, Wang CY, Wang AL.

Fish Physiol Biochem. 2014 Oct;40(5):1423-36. doi: 10.1007/s10695-014-9937-4. Epub 2014 Apr 8.

PMID:
24710601
23.

High resolution CT in differentiating minimally invasive component in early lung adenocarcinoma.

Zhang Y, Qiang JW, Ye JD, Ye XD, Zhang J.

Lung Cancer. 2014 Jun;84(3):236-41. doi: 10.1016/j.lungcan.2014.02.008. Epub 2014 Feb 24. Erratum in: Lung Cancer. 2015 Aug;89(2):222.

PMID:
24679953
24.

Specific RNA-binding antibodies with a four-amino-acid code.

Sherman EM, Holmes S, Ye JD.

J Mol Biol. 2014 May 15;426(10):2145-57. doi: 10.1016/j.jmb.2014.03.003. Epub 2014 Mar 13. Erratum in: J Mol Biol. 2014 Sep 23:426(19):3325.

PMID:
24631830
25.

Numerical simulation research to both the external fixation surgery scheme of intertrochanteric fracture and the healing process, and its clinical application.

Wang XK, Ye JD, Gu FS, Wang AG, Zhang CQ, Tian QQ, Li X, Dong LM.

Biomed Mater Eng. 2014;24(1):625-32. doi: 10.3233/BME-130850.

PMID:
24211947
26.

Utility of 64-MSCT in assessing acute non-reperfused myocardial infarct size.

Qu XK, Fang WY, Ye JD, Guan SF, Li RG, Xu YJ, Shen Y, Zhang M, Liu H.

J Geriatr Cardiol. 2013 Sep;10(3):247-52. doi: 10.3969/j.issn.1671-5411.2013.03.007.

27.

Dynamic CT of solitary pulmonary nodules: comparison of contrast medium distribution characteristic of malignant and benign lesions.

Ye XD, Ye JD, Yuan Z, Li WT, Xiao XS.

Clin Transl Oncol. 2014 Jan;16(1):49-56. doi: 10.1007/s12094-013-1039-8. Epub 2013 Apr 19.

PMID:
23606354
29.

Raman probing of competitive laser heating and local recrystallization effect in ZnO nanocrystals.

Ye JD, Parkinson P, Ren FF, Gu SL, Tan HH, Jagadish C.

Opt Express. 2012 Oct 8;20(21):23281-9. doi: 10.1364/OE.20.023281.

PMID:
23188291
30.

Characterization of solitary pulmonary nodules: Use of washout characteristics at contrast-enhanced computed tomography.

Ye XD, Ye JD, Yuan Z, Dong S, Xiao XS.

Oncol Lett. 2012 Mar;3(3):672-676. Epub 2011 Dec 12.

31.

Mechanical stretch and shear flow induced reorganization and recruitment of fibronectin in fibroblasts.

Steward RL Jr, Cheng CM, Ye JD, Bellin RM, LeDuc PR.

Sci Rep. 2011;1:147. doi: 10.1038/srep00147. Epub 2011 Nov 8.

32.

An energetically beneficial leader-linker interaction abolishes ligand-binding cooperativity in glycine riboswitches.

Sherman EM, Esquiaqui J, Elsayed G, Ye JD.

RNA. 2012 Mar;18(3):496-507. doi: 10.1261/rna.031286.111. Epub 2012 Jan 25.

33.

Improvement of the crystallizability and expression of an RNA crystallization chaperone.

Ravindran PP, Héroux A, Ye JD.

J Biochem. 2011 Nov;150(5):535-43. doi: 10.1093/jb/mvr093. Epub 2011 Jul 23.

34.

[Dynamic enhanced CT evaluation of solitary pulmonary nodules].

Ye XD, Yuan Z, Ye JD, Li HM, Xiao XS.

Zhonghua Zhong Liu Za Zhi. 2011 Apr;33(4):308-12. Chinese.

PMID:
21575507
35.

[Antitumor effect of calcium phosphate cement incorporating doxorubicin microspheres].

Zhang H, Xue ZL, Qi AM, Li S, Ye JD.

Nan Fang Yi Ke Da Xue Xue Bao. 2010 Feb;30(2):278-83. Chinese.

PMID:
20159700
36.

[Spatial structure of Quercus mongolica forest in Beijing Songshan Mountain Nature Reserve].

Yue YJ, Yu XX, Li GT, Fan DX, Ye JD.

Ying Yong Sheng Tai Xue Bao. 2009 Aug;20(8):1811-6. Chinese.

PMID:
19947196
37.

[Values in preoperative assessment of occlusion and intra-operative guidance of 64 row spiral CT in percutaneous coronary intervention for chronic coronary occlusion].

Qu XK, Fang WY, Ye JD, Chen QH, Guan SF, Jiao J.

Zhonghua Yi Xue Za Zhi. 2008 Dec 16;88(46):3268-71. Chinese.

PMID:
19159552
38.

[Histological changes of an injectable rhBMP-2/calcium phosphate cement in vertebroplasty of rhesus monkey].

Bai B, Xu Q, Chen Y, Ye JD, Wu JM, Chen DF.

Zhonghua Wai Ke Za Zhi. 2008 Feb 15;46(4):296-300. Chinese.

PMID:
18683770
39.

Synthetic antibodies for specific recognition and crystallization of structured RNA.

Ye JD, Tereshko V, Frederiksen JK, Koide A, Fellouse FA, Sidhu SS, Koide S, Kossiakoff AA, Piccirilli JA.

Proc Natl Acad Sci U S A. 2008 Jan 8;105(1):82-7. Epub 2007 Dec 27.

40.

Reactions of phosphate and phosphorothiolate diesters with nucleophiles: comparison of transition state structures.

Ye JD, Barth CD, Anjaneyulu PS, Tuschl T, Piccirilli JA.

Org Biomol Chem. 2007 Aug 7;5(15):2491-7. Epub 2007 Jun 29.

PMID:
17637971
41.

The mechanism of RNA strand scission: an experimental measure of the Brønsted coefficient, beta nuc.

Ye JD, Li NS, Dai Q, Piccirilli JA.

Angew Chem Int Ed Engl. 2007;46(20):3714-7. No abstract available.

PMID:
17415726
42.

Enhanced field emission from injector-like ZnO nanostructures with minimized screening effect.

Li C, Yang Y, Sun XW, Lei W, Zhang XB, Wang BP, Wang JX, Tay BK, Ye JD, Lo GQ, Kwong DL.

Nanotechnology. 2007 Apr 4;18(13):135604. doi: 10.1088/0957-4484/18/13/135604. Epub 2007 Feb 28.

PMID:
21730382
43.

Nano-structural bioactive gradient coating fabricated by computer controlled plasma-spraying technology.

Ning CY, Wang YJ, Lu WW, Qiu QX, Lam RW, Chen XF, Chiu KY, Ye JD, Wu G, Wu ZH, Chow SP.

J Mater Sci Mater Med. 2006 Oct;17(10):875-84.

PMID:
16977384
44.

Synthesis of 2'-C-difluoromethylribonucleosides and their enzymatic incorporation into oligonucleotides.

Ye JD, Liao X, Piccirilli JA.

J Org Chem. 2005 Sep 30;70(20):7902-10.

PMID:
16277309
46.

New strategies for exploring RNA's 2'-OH expose the importance of solvent during group II intron catalysis.

Gordon PM, Fong R, Deb SK, Li NS, Schwans JP, Ye JD, Piccirilli JA.

Chem Biol. 2004 Feb;11(2):237-46.

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