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Items: 1 to 50 of 68

1.

Genome Sequence of the Euryhaline Javafish Medaka, Oryzias javanicus: A Small Aquarium Fish Model for Studies on Adaptation to Salinity.

Takehana Y, Zahm M, Cabau C, Klopp C, Roques C, Bouchez O, Donnadieu C, Barrachina C, Journot L, Kawaguchi M, Yasumasu S, Ansai S, Naruse K, Inoue K, Shinzato C, Schartl M, Guiguen Y, Herpin A.

G3 (Bethesda). 2020 Mar 5;10(3):907-915. doi: 10.1534/g3.119.400725.

2.

Male parental assistance in embryo hatching of barred-chin blenny Rhabdoblennius nitidus.

Sano K, Yokoyama R, Kitano T, Takegaki T, Kitazawa N, Kaneko T, Nishino Y, Yasumasu S, Kawaguchi M.

J Exp Zool B Mol Dev Evol. 2019 May;332(3-4):81-91. doi: 10.1002/jez.b.22854. Epub 2019 Apr 9.

PMID:
30964605
3.

Translocation of promoter-conserved hatching enzyme genes with intron-loss provides a new insight in the role of retrocopy during teleostean evolution.

Nagasawa T, Kawaguchi M, Yano T, Isoyama S, Yasumasu S, Okabe M.

Sci Rep. 2019 Feb 21;9(1):2448. doi: 10.1038/s41598-019-38693-6.

4.

Nanos3 of the frog Rana rugosa: Molecular cloning and characterization.

Kodama M, Yoshida M, Endo M, Kobayashi T, Oike A, Yasumasu S, Nakamura M.

Dev Growth Differ. 2018 Feb;60(2):112-120. doi: 10.1111/dgd.12421. Epub 2018 Feb 5.

PMID:
29405266
5.

Origin of sex chromosomes in six groups of Rana rugosa frogs inferred from a sex-linked DNA marker.

Oike A, Watanabe K, Min MS, Tojo K, Kumagai M, Kimoto Y, Yamashiro T, Matsuo T, Kodama M, Nakamura Y, Notsu M, Tochimoto T, Fujita H, Ota M, Ito E, Yasumasu S, Nakamura M.

J Exp Zool A Ecol Integr Physiol. 2017 Aug;327(7):444-452. doi: 10.1002/jez.2130. Epub 2017 Dec 7.

PMID:
29356406
6.

Morphology of brood pouch formation in the pot-bellied seahorse Hippocampus abdominalis.

Kawaguchi M, Okubo R, Harada A, Miyasaka K, Takada K, Hiroi J, Yasumasu S.

Zoological Lett. 2017 Oct 17;3:19. doi: 10.1186/s40851-017-0080-9. eCollection 2017.

7.

Participation of androgen and its receptor in sex determination of an amphibian species.

Oike A, Kodama M, Yasumasu S, Yamamoto T, Nakamura Y, Ito E, Nakamura M.

PLoS One. 2017 Jun 5;12(6):e0178067. doi: 10.1371/journal.pone.0178067. eCollection 2017.

8.

Comparison of Egg Envelope Thickness in Teleosts and its Relationship to the Sites of ZP Protein Synthesis.

Sano K, Kawaguchi M, Katano K, Tomita K, Inokuchi M, Nagasawa T, Hiroi J, Kaneko T, Kitagawa T, Fujimoto T, Arai K, Tanaka M, Yasumasu S.

J Exp Zool B Mol Dev Evol. 2017 May;328(3):240-258. doi: 10.1002/jez.b.22729. Epub 2017 Feb 23.

PMID:
28229554
9.

Evolutionary Changes in the Developmental Origin of Hatching Gland Cells in Basal Ray-Finned Fishes.

Nagasawa T, Kawaguchi M, Yano T, Sano K, Okabe M, Yasumasu S.

Zoolog Sci. 2016 Jun;33(3):272-81. doi: 10.2108/zs150183.

PMID:
27268981
10.

Purification and molecular cloning of aspartic proteinases from the stomach of adult Japanese fire belly newts, Cynops pyrrhogaster.

Nagasawa T, Sano K, Kawaguchi M, Kobayashi K, Yasumasu S, Inokuchi T.

J Biochem. 2016 Apr;159(4):449-60. doi: 10.1093/jb/mvv128. Epub 2015 Dec 28.

11.

Sturgeon hatching enzyme and the mechanism of egg envelope digestion: Insight into changes in the mechanism of egg envelope digestion during the evolution of ray-finned fish.

Nagasawa T, Kawaguchi M, Sano K, Yasumasu S.

J Exp Zool B Mol Dev Evol. 2015 Dec;324(8):720-32. doi: 10.1002/jez.b.22660. Epub 2015 Oct 30.

PMID:
26514945
12.

Evolutionary pathway of pseudogenization of globin genes, α5 and β5, in genus Oryzias.

Maruyama K, Wang B, Ishikawa Y, Yasumasu S, Iuchi I.

Dev Genes Evol. 2015 Sep;225(5):305-11. doi: 10.1007/s00427-015-0509-0. Epub 2015 Jul 22.

PMID:
26199047
13.

Comparison of hatching mode in pelagic and demersal eggs of two closely related species in the order pleuronectiformes.

Kawaguchi M, Sano K, Yoshizaki N, Shimizu D, Fujinami Y, Noda T, Yasumasu S.

Zoolog Sci. 2014 Nov;31(11):709-15. doi: 10.2108/zs140018.

PMID:
25366152
14.

Neofunctionalization of a duplicate hatching enzyme gene during the evolution of teleost fishes.

Sano K, Kawaguchi M, Watanabe S, Yasumasu S.

BMC Evol Biol. 2014 Oct 19;14:221. doi: 10.1186/s12862-014-0221-0.

15.

Molecular co-evolution of a protease and its substrate elucidated by analysis of the activity of predicted ancestral hatching enzyme.

Kawaguchi M, Inoue K, Iuchi I, Nishida M, Yasumasu S.

BMC Evol Biol. 2013 Oct 25;13:231. doi: 10.1186/1471-2148-13-231.

16.

Inferring the evolution of teleostean zp genes based on their sites of expression.

Sano K, Kawaguchi M, Watanabe S, Nagakura Y, Hiraki T, Yasumasu S.

J Exp Zool B Mol Dev Evol. 2013 Jul;320(5):332-43. doi: 10.1002/jez.b.22507. Epub 2013 May 2.

PMID:
23640864
17.

Sub-functionalization of duplicated genes in the evolution of nine-spined stickleback hatching enzyme.

Kawaguchi M, Takahashi H, Takehana Y, Naruse K, Nishida M, Yasumasu S.

J Exp Zool B Mol Dev Evol. 2013 May;320(3):140-50. doi: 10.1002/jez.b.22490. Epub 2013 Apr 1.

PMID:
23554322
18.

Adaptive evolution of fish hatching enzyme: one amino acid substitution results in differential salt dependency of the enzyme.

Kawaguchi M, Yasumasu S, Shimizu A, Kudo N, Sano K, Iuchi I, Nishida M.

J Exp Biol. 2013 May 1;216(Pt 9):1609-15. doi: 10.1242/jeb.069716. Epub 2013 Jan 24.

19.

1kbp 5' upstream sequence enables developmental stage-specific expressions of globin genes in the fish, medaka Oryzias latipes.

Maruyama K, Wang B, Ishikawa Y, Yasumasu S, Iuchi I.

Gene. 2012 Jan 15;492(1):212-9. doi: 10.1016/j.gene.2011.10.026. Epub 2011 Oct 26.

PMID:
22051778
20.

Hatching enzyme of Japanese eel Anguilla japonica and the possible evolution of the egg envelope digestion mechanism.

Sano K, Kawaguchi M, Yoshikawa M, Kaneko T, Tanaka T, Iuchi I, Yasumasu S.

FEBS J. 2011 Oct;278(19):3711-23. doi: 10.1111/j.1742-4658.2011.08289.x. Epub 2011 Sep 6.

21.

Conservation of the egg envelope digestion mechanism of hatching enzyme in euteleostean fishes.

Kawaguchi M, Yasumasu S, Shimizu A, Sano K, Iuchi I, Nishida M.

FEBS J. 2010 Dec;277(23):4973-87. doi: 10.1111/j.1742-4658.2010.07907.x. Epub 2010 Nov 11.

22.

Evolution of the teleostean zona pellucida gene inferred from the egg envelope protein genes of the Japanese eel, Anguilla japonica.

Sano K, Kawaguchi M, Yoshikawa M, Iuchi I, Yasumasu S.

FEBS J. 2010 Nov;277(22):4674-84. doi: 10.1111/j.1742-4658.2010.07874.x. Epub 2010 Oct 11.

23.

Intron-loss evolution of hatching enzyme genes in Teleostei.

Kawaguchi M, Hiroi J, Miya M, Nishida M, Iuchi I, Yasumasu S.

BMC Evol Biol. 2010 Aug 27;10:260. doi: 10.1186/1471-2148-10-260.

24.

Crystal structure of zebrafish hatching enzyme 1 from the zebrafish Danio rerio.

Okada A, Sano K, Nagata K, Yasumasu S, Ohtsuka J, Yamamura A, Kubota K, Iuchi I, Tanokura M.

J Mol Biol. 2010 Oct 8;402(5):865-78. doi: 10.1016/j.jmb.2010.08.023. Epub 2010 Aug 18.

PMID:
20727360
25.

Mechanism of egg envelope digestion by hatching enzymes, HCE and LCE in medaka, Oryzias latipes.

Yasumasu S, Kawaguchi M, Ouchi S, Sano K, Murata K, Sugiyama H, Akema T, Iuchi I.

J Biochem. 2010 Oct;148(4):439-48. doi: 10.1093/jb/mvq086. Epub 2010 Aug 2.

PMID:
20679367
26.

Hatching mechanism of the Chinese soft-shelled turtle Pelodiscus sinensis.

Yasumasu S, Uzawa M, Iwasawa A, Yoshizaki N.

Comp Biochem Physiol B Biochem Mol Biol. 2010 Apr;155(4):435-41. doi: 10.1016/j.cbpb.2010.01.009. Epub 2010 Jan 25.

PMID:
20109577
27.

A possible role of chorion protease in shell membrane degradation during development of quail embryos.

Iwasawa A, Mao KM, Yasumasu S, Yoshizaki N.

Poult Sci. 2009 Dec;88(12):2636-43. doi: 10.3382/ps.2009-00292.

28.

Crystallization and preliminary X-ray analysis of ZHE1, a hatching enzyme from the zebrafish Danio rerio.

Okada A, Nagata K, Sano K, Yasumasu S, Kubota K, Ohtsuka J, Iuchi I, Tanokura M.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Oct 1;65(Pt 10):1018-20. doi: 10.1107/S1744309109033016. Epub 2009 Sep 23.

29.

Different hatching strategies in embryos of two species, pacific herring Clupea pallasii and Japanese anchovy Engraulis japonicus, that belong to the same order Clupeiformes, and their environmental adaptation.

Kawaguchi M, Fujita H, Yoshizaki N, Hiroi J, Okouchi H, Nagakura Y, Noda T, Watanabe S, Katayama S, Iwamuro S, Nishida M, Iuchi I, Yasumasu S.

J Exp Zool B Mol Dev Evol. 2009 Mar 15;312(2):95-107. doi: 10.1002/jez.b.21247.

PMID:
19025965
30.

Purification and characterization of zebrafish hatching enzyme - an evolutionary aspect of the mechanism of egg envelope digestion.

Sano K, Inohaya K, Kawaguchi M, Yoshizaki N, Iuchi I, Yasumasu S.

FEBS J. 2008 Dec;275(23):5934-46. doi: 10.1111/j.1742-4658.2008.06722.x.

31.

Evidence for an apical Na-Cl cotransporter involved in ion uptake in a teleost fish.

Hiroi J, Yasumasu S, McCormick SD, Hwang PP, Kaneko T.

J Exp Biol. 2008 Aug;211(Pt 16):2584-99. doi: 10.1242/jeb.018663.

32.

Hatching enzyme of the ovoviviparous black rockfish Sebastes schlegelii- environmental adaptation of the hatching enzyme and evolutionary aspects of formation of the pseudogene.

Kawaguchi M, Nakagawa M, Noda T, Yoshizaki N, Hiroi J, Nishida M, Iuchi I, Yasumasu S.

FEBS J. 2008 Jun;275(11):2884-98. doi: 10.1111/j.1742-4658.2008.06427.x. Epub 2008 Apr 22.

33.

Globin gene enhancer activity of a DNase-I hypersensitive site-40 homolog in medaka, Oryzias latipes.

Maruyama K, Ishikawa Y, Yasumasu S, Iuchi I.

Zoolog Sci. 2007 Oct;24(10):997-1004.

PMID:
18088176
34.

Cloning and expression of xP1-L, a new marker gene for larval surface mucous cells of tadpole stomach in Xenopus laevis.

Ikuzawa M, Yasumasu S, Kobayashi K, Iuchi I.

Gene Expr Patterns. 2007 Dec;8(1):12-8. Epub 2007 Sep 8.

PMID:
17928274
35.
36.

Evolution of teleostean hatching enzyme genes and their paralogous genes.

Kawaguchi M, Yasumasu S, Hiroi J, Naruse K, Inoue M, Iuchi I.

Dev Genes Evol. 2006 Dec;216(12):769-84. Epub 2006 Oct 3.

PMID:
17016731
37.

Thyroid hormone-induced expression of a bZip-containing transcription factor activates epithelial cell proliferation during Xenopus larval-to-adult intestinal remodeling.

Ikuzawa M, Shimizu K, Yasumasu S, Iuchi I, Shi YB, Ishizuya-Oka A.

Dev Genes Evol. 2006 Mar;216(3):109-18. Epub 2005 Nov 15.

PMID:
16292540
39.

Cloning of a quail homologue of hatching enzyme: its conserved function and additional function in egg envelope digestion.

Yasumasu S, Mao KM, Sultana F, Sakaguchi H, Yoshizaki N.

Dev Genes Evol. 2005 Oct;215(10):489-98. Epub 2005 Nov 1.

PMID:
16003522
40.
41.

Stomach remodeling-associated changes of H+/K+-ATPase beta subunit expression in Xenopus laevis and H+/K+-ATPase-dependent acid secretion in tadpole stomach.

Ikuzawa M, Yasumasu S, Kobayashi K, Inokuchi T, Iuchi I.

J Exp Zool A Comp Exp Biol. 2004 Dec 1;301(12):992-1002.

PMID:
15562447
42.

Morphogenesis and regionalization of the medaka embryonic brain.

Kage T, Takeda H, Yasuda T, Maruyama K, Yamamoto N, Yoshimoto M, Araki K, Inohaya K, Okamoto H, Yasumasu S, Watanabe K, Ito H, Ishikawa Y.

J Comp Neurol. 2004 Aug 23;476(3):219-39.

PMID:
15269967
43.
44.

Evolution of globin genes of the medaka Oryzias latipes (Euteleostei; Beloniformes; Oryziinae).

Maruyama K, Yasumasu S, Iuchi I.

Mech Dev. 2004 Jul;121(7-8):753-69.

45.

Genomic organization and developmental expression of globin genes in the teleost Oryzias latipes.

Maruyama K, Yasumasu S, Naruse K, Mitani H, Shima A, Iuchi I.

Gene. 2004 Jun 23;335:89-100.

PMID:
15194192
46.

Crystallization and preliminary X-ray analysis of HCE-1, a hatching enzyme of medaka fish, Oryzias latipes.

Kudo N, Yasumasu S, Iuchi I, Tanokura M.

Acta Crystallogr D Biol Crystallogr. 2004 Apr;60(Pt 4):725-6. Epub 2004 Mar 23.

PMID:
15039566
47.

Structure and developmental expression of hatching enzyme genes of the Japanese eel Anguilla japonica: an aspect of the evolution of fish hatching enzyme gene.

Hiroi J, Maruyama K, Kawazu K, Kaneko T, Ohtani-Kaneko R, Yasumasu S.

Dev Genes Evol. 2004 Apr;214(4):176-84. Epub 2004 Mar 10.

PMID:
15014992
48.

Differential expression of two cathepsin Es during metamorphosis-associated remodeling of the larval to adult type epithelium in Xenopus stomach.

Ikuzawa M, Yasumasu S, Inokuchi T, Kobayashi K, Nomura K, Iuchi I.

J Biochem. 2003 Sep;134(3):385-94.

49.

Molecular cloning of preprocathepsin E cDNA from the stomach of bullfrog Rana catesbeiana.

Inokuchi T, Ikuzawa M, Mineta T, Yasumasu S, Kobayashi K.

Comp Biochem Physiol B Biochem Mol Biol. 2003 Aug;135(4):647-55.

PMID:
12892756
50.

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