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Identification and manipulation of Neurospora crassa genes involved in sensitivity to furfural.

Feldman D, Kowbel DJ, Cohen A, Glass NL, Hadar Y, Yarden O.

Biotechnol Biofuels. 2019 Sep 4;12:210. doi: 10.1186/s13068-019-1550-4. eCollection 2019.


Manipulating the Expression of Small Secreted Protein 1 (Ssp1) Alters Patterns of Development and Metabolism in the White-Rot Fungus Pleurotus ostreatus.

Feldman D, Amedi N, Carmeli S, Yarden O, Hadar Y.

Appl Environ Microbiol. 2019 Jul 18;85(15). pii: e00761-19. doi: 10.1128/AEM.00761-19. Print 2019 Aug 1.


Metabolism and Development during Conidial Germination in Response to a Carbon-Nitrogen-Rich Synthetic or a Natural Source of Nutrition in Neurospora crassa.

Wang Z, Miguel-Rojas C, Lopez-Giraldez F, Yarden O, Trail F, Townsend JP.

MBio. 2019 Mar 26;10(2). pii: e00192-19. doi: 10.1128/mBio.00192-19.


Fungi in the Marine Environment: Open Questions and Unsolved Problems.

Amend A, Burgaud G, Cunliffe M, Edgcomb VP, Ettinger CL, Gutiérrez MH, Heitman J, Hom EFY, Ianiri G, Jones AC, Kagami M, Picard KT, Quandt CA, Raghukumar S, Riquelme M, Stajich J, Vargas-Muñiz J, Walker AK, Yarden O, Gladfelter AS.

MBio. 2019 Mar 5;10(2). pii: e01189-18. doi: 10.1128/mBio.01189-18. Review.


Transcriptional profiling and localization of GUL-1, a COT-1 pathway component, in Neurospora crassa.

Herold I, Kowbel D, Delgado-Álvarez DL, Garduño-Rosales M, Mouriño-Pérez RR, Yarden O.

Fungal Genet Biol. 2019 May;126:1-11. doi: 10.1016/j.fgb.2019.01.010. Epub 2019 Feb 4.


Effects of cre1 modification in the white-rot fungus Pleurotus ostreatus PC9: altering substrate preference during biological pretreatment.

Yoav S, Salame TM, Feldman D, Levinson D, Ioelovich M, Morag E, Yarden O, Bayer EA, Hadar Y.

Biotechnol Biofuels. 2018 Jul 27;11:212. doi: 10.1186/s13068-018-1209-6. eCollection 2018.


The diversity of Trichoderma species from soil in South Africa, with five new additions.

du Plessis IL, Druzhinina IS, Atanasova L, Yarden O, Jacobs K.

Mycologia. 2018 May-Jun;110(3):559-583. doi: 10.1080/00275514.2018.1463059. Epub 2018 Jun 14.


Altering Neurospora crassa MOB2A exposes its functions in development and affects its interaction with the NDR kinase COT1.

Aharoni-Kats L, Zelinger E, Chen S, Yarden O.

Mol Microbiol. 2018 Jun;108(6):641-660. doi: 10.1111/mmi.13954. Epub 2018 Apr 19.


Author Correction: A role for small secreted proteins (SSPs) in a saprophytic fungal lifestyle: Ligninolytic enzyme regulation in Pleurotus ostreatus.

Feldman D, Kowbel DJ, Glass NL, Yarden O, Hadar Y.

Sci Rep. 2018 Mar 6;8(1):4213. doi: 10.1038/s41598-018-21904-x.


Abnormal Ergosterol Biosynthesis Activates Transcriptional Responses to Antifungal Azoles.

Hu C, Zhou M, Wang W, Sun X, Yarden O, Li S.

Front Microbiol. 2018 Jan 17;9:9. doi: 10.3389/fmicb.2018.00009. eCollection 2018.


A role for small secreted proteins (SSPs) in a saprophytic fungal lifestyle: Ligninolytic enzyme regulation in Pleurotus ostreatus.

Feldman D, Kowbel DJ, Glass NL, Yarden O, Hadar Y.

Sci Rep. 2017 Nov 6;7(1):14553. doi: 10.1038/s41598-017-15112-2. Erratum in: Sci Rep. 2018 Mar 6;8(1):4213.


The Neurospora crassa PP2A Regulatory Subunits RGB1 and B56 Are Required for Proper Growth and Development and Interact with the NDR Kinase COT1.

Shomin-Levi H, Yarden O.

Front Microbiol. 2017 Sep 5;8:1694. doi: 10.3389/fmicb.2017.01694. eCollection 2017.


Irradiation by blue light in the presence of a photoacid confers changes to colony morphology of the plant pathogen Colletotrichum gloeosporioides.

Simkovitch R, Gajst O, Zelinger E, Yarden O, Huppert D.

J Photochem Photobiol B. 2017 Sep;174:1-9. doi: 10.1016/j.jphotobiol.2017.06.041. Epub 2017 Jun 28.


A recombinant fungal compound induces anti-proliferative and pro-apoptotic effects on colon cancer cells.

Nimri L, Spivak O, Tal D, Schälling D, Peri I, Graeve L, Salame TM, Yarden O, Hadar Y, Schwartz B.

Oncotarget. 2017 Apr 25;8(17):28854-28864. doi: 10.18632/oncotarget.15859.


Regulation of Neurospora crassa cell wall remodeling via the cot-1 pathway is mediated by gul-1.

Herold I, Yarden O.

Curr Genet. 2017 Feb;63(1):145-159. doi: 10.1007/s00294-016-0625-z. Epub 2016 Jun 30.


Limits of Versatility of Versatile Peroxidase.

Knop D, Levinson D, Makovitzki A, Agami A, Lerer E, Mimran A, Yarden O, Hadar Y.

Appl Environ Microbiol. 2016 Jun 30;82(14):4070-4080. doi: 10.1128/AEM.00743-16. Print 2016 Jul 15.


Impact of urban air pollution on the allergenicity of Aspergillus fumigatus conidia: Outdoor exposure study supported by laboratory experiments.

Lang-Yona N, Shuster-Meiseles T, Mazar Y, Yarden O, Rudich Y.

Sci Total Environ. 2016 Jan 15;541:365-371. doi: 10.1016/j.scitotenv.2015.09.058. Epub 2015 Sep 25.


Detoxification of 5-hydroxymethylfurfural by the Pleurotus ostreatus lignolytic enzymes aryl alcohol oxidase and dehydrogenase.

Feldman D, Kowbel DJ, Glass NL, Yarden O, Hadar Y.

Biotechnol Biofuels. 2015 Apr 11;8:63. doi: 10.1186/s13068-015-0244-9. eCollection 2015.


Pathogenic attributes of Sclerotinia sclerotiorum: switching from a biotrophic to necrotrophic lifestyle.

Kabbage M, Yarden O, Dickman MB.

Plant Sci. 2015 Apr;233:53-60. doi: 10.1016/j.plantsci.2014.12.018. Epub 2014 Dec 31. Review.


The ligninolytic peroxidases in the genus Pleurotus: divergence in activities, expression, and potential applications.

Knop D, Yarden O, Hadar Y.

Appl Microbiol Biotechnol. 2015 Feb;99(3):1025-38. doi: 10.1007/s00253-014-6256-8. Epub 2014 Dec 12. Review.


Sensitivity of Neurospora crassa to a marine-derived Aspergillus tubingensis anhydride exhibiting antifungal activity that is mediated by the MAS1 protein.

Koch L, Lodin A, Herold I, Ilan M, Carmeli S, Yarden O.

Mar Drugs. 2014 Sep 1;12(9):4713-31. doi: 10.3390/md12094713.


Fungal association with sessile marine invertebrates.

Yarden O.

Front Microbiol. 2014 May 15;5:228. doi: 10.3389/fmicb.2014.00228. eCollection 2014. Review.


Mn²⁺-deficiency reveals a key role for the Pleurotus ostreatus versatile peroxidase (VP4) in oxidation of aromatic compounds.

Knop D, Ben-Ari J, Salame TM, Levinson D, Yarden O, Hadar Y.

Appl Microbiol Biotechnol. 2014 Aug;98(15):6795-804. doi: 10.1007/s00253-014-5689-4. Epub 2014 Apr 17.


Eight new peptaibols from sponge-associated Trichoderma atroviride.

Panizel I, Yarden O, Ilan M, Carmeli S.

Mar Drugs. 2013 Dec 11;11(12):4937-60. doi: 10.3390/md11124937.


Neurospora crassa protein arginine methyl transferases are involved in growth and development and interact with the NDR kinase COT1.

Feldman D, Ziv C, Gorovits R, Efrat M, Yarden O.

PLoS One. 2013 Nov 19;8(11):e80756. doi: 10.1371/journal.pone.0080756. eCollection 2013.


Inactivation of a Pleurotus ostreatus versatile peroxidase-encoding gene (mnp2) results in reduced lignin degradation.

Salame TM, Knop D, Levinson D, Mabjeesh SJ, Yarden O, Hadar Y.

Environ Microbiol. 2014 Jan;16(1):265-77. doi: 10.1111/1462-2920.12279. Epub 2013 Oct 10.


The N-terminal region of the Neurospora NDR kinase COT1 regulates morphology via its interactions with MOB2A/B.

Ziv C, Feldman D, Aharoni-Kats L, Chen S, Liu Y, Yarden O.

Mol Microbiol. 2013 Oct;90(2):383-99. doi: 10.1111/mmi.12371. Epub 2013 Sep 8.


Changes in atmospheric CO2 influence the allergenicity of Aspergillus fumigatus.

Lang-Yona N, Levin Y, Dannemiller KC, Yarden O, Peccia J, Rudich Y.

Glob Chang Biol. 2013 Aug;19(8):2381-8. doi: 10.1111/gcb.12219. Epub 2013 May 14.


Redundancy among manganese peroxidases in Pleurotus ostreatus.

Salame TM, Knop D, Levinson D, Yarden O, Hadar Y.

Appl Environ Microbiol. 2013 Apr;79(7):2405-15. doi: 10.1128/AEM.03849-12. Epub 2013 Feb 1.


Release of Pleurotus ostreatus versatile-peroxidase from Mn2+ repression enhances anthropogenic and natural substrate degradation.

Salame TM, Knop D, Levinson D, Mabjeesh SJ, Yarden O, Hadar Y.

PLoS One. 2012;7(12):e52446. doi: 10.1371/journal.pone.0052446. Epub 2012 Dec 21.


Predominance of a versatile-peroxidase-encoding gene, mnp4, as demonstrated by gene replacement via a gene targeting system for Pleurotus ostreatus.

Salame TM, Knop D, Tal D, Levinson D, Yarden O, Hadar Y.

Appl Environ Microbiol. 2012 Aug;78(15):5341-52. doi: 10.1128/AEM.01234-12. Epub 2012 May 25.


Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis.

Fernandez-Fueyo E, Ruiz-Dueñas FJ, Ferreira P, Floudas D, Hibbett DS, Canessa P, Larrondo LF, James TY, Seelenfreund D, Lobos S, Polanco R, Tello M, Honda Y, Watanabe T, Watanabe T, Ryu JS, Kubicek CP, Schmoll M, Gaskell J, Hammel KE, St John FJ, Vanden Wymelenberg A, Sabat G, Splinter BonDurant S, Syed K, Yadav JS, Doddapaneni H, Subramanian V, Lavín JL, Oguiza JA, Perez G, Pisabarro AG, Ramirez L, Santoyo F, Master E, Coutinho PM, Henrissat B, Lombard V, Magnuson JK, Kües U, Hori C, Igarashi K, Samejima M, Held BW, Barry KW, LaButti KM, Lapidus A, Lindquist EA, Lucas SM, Riley R, Salamov AA, Hoffmeister D, Schwenk D, Hadar Y, Yarden O, de Vries RP, Wiebenga A, Stenlid J, Eastwood D, Grigoriev IV, Berka RM, Blanchette RA, Kersten P, Martinez AT, Vicuna R, Cullen D.

Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5458-63. doi: 10.1073/pnas.1119912109. Epub 2012 Mar 20. Erratum in: Proc Natl Acad Sci U S A. 2012 May 22;109(21):8352. San, Ryu Jae [corrected to Ryu, Jae San].


Sensitive detection and identification of DNA and RNA using a patterned capillary tube.

Bardea A, Burshtein N, Rudich Y, Salame T, Ziv C, Yarden O, Naaman R.

Anal Chem. 2011 Dec 15;83(24):9418-23. doi: 10.1021/ac202480w. Epub 2011 Nov 11.


Stabilization of the α2 isoform of Na,K-ATPase by mutations in a phospholipid binding pocket.

Kapri-Pardes E, Katz A, Haviv H, Mahmmoud Y, Ilan M, Khalfin-Penigel I, Carmeli S, Yarden O, Karlish SJ.

J Biol Chem. 2011 Dec 16;286(50):42888-99. doi: 10.1074/jbc.M111.293852. Epub 2011 Oct 25.


Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.

Amselem J, Cuomo CA, van Kan JA, Viaud M, Benito EP, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S, Fournier E, Gout L, Hahn M, Kohn L, Lapalu N, Plummer KM, Pradier JM, Quévillon E, Sharon A, Simon A, ten Have A, Tudzynski B, Tudzynski P, Wincker P, Andrew M, Anthouard V, Beever RE, Beffa R, Benoit I, Bouzid O, Brault B, Chen Z, Choquer M, Collémare J, Cotton P, Danchin EG, Da Silva C, Gautier A, Giraud C, Giraud T, Gonzalez C, Grossetete S, Güldener U, Henrissat B, Howlett BJ, Kodira C, Kretschmer M, Lappartient A, Leroch M, Levis C, Mauceli E, Neuvéglise C, Oeser B, Pearson M, Poulain J, Poussereau N, Quesneville H, Rascle C, Schumacher J, Ségurens B, Sexton A, Silva E, Sirven C, Soanes DM, Talbot NJ, Templeton M, Yandava C, Yarden O, Zeng Q, Rollins JA, Lebrun MH, Dickman M.

PLoS Genet. 2011 Aug;7(8):e1002230. doi: 10.1371/journal.pgen.1002230. Epub 2011 Aug 18.


Novel terpenoids of the fungus Aspergillus insuetus isolated from the Mediterranean sponge Psammocinia sp. collected along the coast of Israel.

Cohen E, Koch L, Thu KM, Rahamim Y, Aluma Y, Ilan M, Yarden O, Carmeli S.

Bioorg Med Chem. 2011 Nov 15;19(22):6587-93. doi: 10.1016/j.bmc.2011.05.045. Epub 2011 May 30.


Marine isolates of Trichoderma spp. as potential halotolerant agents of biological control for arid-zone agriculture.

Gal-Hemed I, Atanasova L, Komon-Zelazowska M, Druzhinina IS, Viterbo A, Yarden O.

Appl Environ Microbiol. 2011 Aug;77(15):5100-9. doi: 10.1128/AEM.00541-11. Epub 2011 Jun 10.


Architecture and development of the Neurospora crassa hypha -- a model cell for polarized growth.

Riquelme M, Yarden O, Bartnicki-Garcia S, Bowman B, Castro-Longoria E, Free SJ, Fleissner A, Freitag M, Lew RR, Mouriño-Pérez R, Plamann M, Rasmussen C, Richthammer C, Roberson RW, Sanchez-Leon E, Seiler S, Watters MK.

Fungal Biol. 2011 Jun;115(6):446-74. doi: 10.1016/j.funbio.2011.02.008. Epub 2011 Feb 19. Review.


Inactivation of Snt2, a BAH/PHD-containing transcription factor, impairs pathogenicity and increases autophagosome abundance in Fusarium oxysporum.

Denisov Y, Freeman S, Yarden O.

Mol Plant Pathol. 2011 Jun;12(5):449-61. doi: 10.1111/j.1364-3703.2010.00683.x. Epub 2011 Jan 5.


Neurosporaside, a tetraglycosylated sphingolipid from Neurospora crassa.

Costantino V, Mangoni A, Teta R, Kra-Oz G, Yarden O.

J Nat Prod. 2011 Apr 25;74(4):554-8. doi: 10.1021/np1009493. Epub 2011 Mar 22.


Pleurotus ostreatus manganese-dependent peroxidase silencing impairs decolourization of Orange II.

Salame TM, Yarden O, Hadar Y.

Microb Biotechnol. 2010 Jan;3(1):93-106. doi: 10.1111/j.1751-7915.2009.00154.x. Epub 2009 Nov 11.


RNAi as a potential tool for biotechnological applications in fungi.

Salame TM, Ziv C, Hadar Y, Yarden O.

Appl Microbiol Biotechnol. 2011 Feb;89(3):501-12. doi: 10.1007/s00253-010-2928-1. Epub 2010 Oct 17. Review.


Gene silencing for functional analysis: assessing RNAi as a tool for manipulation of gene expression.

Ziv C, Yarden O.

Methods Mol Biol. 2010;638:77-100. doi: 10.1007/978-1-60761-611-5_6.


The NDR kinase DBF-2 is involved in regulation of mitosis, conidial development, and glycogen metabolism in Neurospora crassa.

Dvash E, Kra-Oz G, Ziv C, Carmeli S, Yarden O.

Eukaryot Cell. 2010 Apr;9(4):502-13. doi: 10.1128/EC.00230-09. Epub 2009 Dec 4.


Cell elongation and branching are regulated by differential phosphorylation states of the nuclear Dbf2-related kinase COT1 in Neurospora crassa.

Ziv C, Kra-Oz G, Gorovits R, März S, Seiler S, Yarden O.

Mol Microbiol. 2009 Nov;74(4):974-89. doi: 10.1111/j.1365-2958.2009.06911.x. Epub 2009 Oct 8.


Two NDR kinase-MOB complexes function as distinct modules during septum formation and tip extension in Neurospora crassa.

Maerz S, Dettmann A, Ziv C, Liu Y, Valerius O, Yarden O, Seiler S.

Mol Microbiol. 2009 Nov;74(3):707-23. doi: 10.1111/j.1365-2958.2009.06896.x. Epub 2009 Sep 28.


Synthesis and antifungal activity of beta-trifluoroalkyl aminovinyl ketone derivatives.

Gellerman G, Pariente N, Paz Z, Shnaiderman A, Yarden O.

J Agric Food Chem. 2009 Sep 23;57(18):8303-7. doi: 10.1021/jf902190w.


Gene silencing of mannose 6-phosphate reductase in the parasitic weed Orobanche aegyptiaca through the production of homologous dsRNA sequences in the host plant.

Aly R, Cholakh H, Joel DM, Leibman D, Steinitz B, Zelcer A, Naglis A, Yarden O, Gal-On A.

Plant Biotechnol J. 2009 Aug;7(6):487-98. doi: 10.1111/j.1467-7652.2009.00418.x. Epub 2009 May 21.


Presence of Aspergillus sydowii, a pathogen of gorgonian sea fans in the marine sponge Spongia obscura.

Ein-Gil N, Ilan M, Carmeli S, Smith GW, Pawlik JR, Yarden O.

ISME J. 2009 Jun;3(6):752-5. doi: 10.1038/ismej.2009.18. Epub 2009 Mar 12.


Efficient gene replacement and direct hyphal transformation in Sclerotinia sclerotiorum.

Levy M, Erental A, Yarden O.

Mol Plant Pathol. 2008 Sep;9(5):719-25. doi: 10.1111/j.1364-3703.2008.00483.x.

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