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Items: 40

1.

Interspecific introgression mediates adaptation to whole genome duplication.

Marburger S, Monnahan P, Seear PJ, Martin SH, Koch J, Paajanen P, Bohutínská M, Higgins JD, Schmickl R, Yant L.

Nat Commun. 2019 Nov 18;10(1):5218. doi: 10.1038/s41467-019-13159-5.

2.

The genome-wide impact of cadmium on microRNA and mRNA expression in contrasting Cd responsive wheat genotypes.

Zhou M, Zheng S, Liu R, Lu L, Zhang C, Zhang L, Yant L, Wu Y.

BMC Genomics. 2019 Jul 29;20(1):615. doi: 10.1186/s12864-019-5939-z.

3.

Genome-wide identification, phylogenetic and expression analysis of the heat shock transcription factor family in bread wheat (Triticum aestivum L.).

Zhou M, Zheng S, Liu R, Lu J, Lu L, Zhang C, Liu Z, Luo C, Zhang L, Yant L, Wu Y.

BMC Genomics. 2019 Jun 18;20(1):505. doi: 10.1186/s12864-019-5876-x.

4.

Convergent evolution in Arabidopsis halleri and Arabidopsis arenosa on calamine metalliferous soils.

Preite V, Sailer C, Syllwasschy L, Bray S, Ahmadi H, Krämer U, Yant L.

Philos Trans R Soc Lond B Biol Sci. 2019 Jul 22;374(1777):20180243. doi: 10.1098/rstb.2018.0243. Epub 2019 Jun 3.

5.

Pervasive population genomic consequences of genome duplication in Arabidopsis arenosa.

Monnahan P, Kolář F, Baduel P, Sailer C, Koch J, Horvath R, Laenen B, Schmickl R, Paajanen P, Šrámková G, Bohutínská M, Arnold B, Weisman CM, Marhold K, Slotte T, Bomblies K, Yant L.

Nat Ecol Evol. 2019 Mar;3(3):457-468. doi: 10.1038/s41559-019-0807-4. Epub 2019 Feb 25.

PMID:
30804518
6.

FT Modulates Genome-Wide DNA-Binding of the bZIP Transcription Factor FD.

Collani S, Neumann M, Yant L, Schmid M.

Plant Physiol. 2019 May;180(1):367-380. doi: 10.1104/pp.18.01505. Epub 2019 Feb 15.

7.

Fluctuating selection on migrant adaptive sodium transporter alleles in coastal Arabidopsis thaliana.

Busoms S, Paajanen P, Marburger S, Bray S, Huang XY, Poschenrieder C, Yant L, Salt DE.

Proc Natl Acad Sci U S A. 2018 Dec 26;115(52):E12443-E12452. doi: 10.1073/pnas.1816964115. Epub 2018 Dec 7.

8.

Hybrids and horizontal transfer: introgression allows adaptive allele discovery.

Schmickl R, Marburger S, Bray S, Yant L.

J Exp Bot. 2017 Nov 28;68(20):5453-5470. doi: 10.1093/jxb/erx297. Review.

PMID:
29096001
9.

Genomic studies of adaptive evolution in outcrossing Arabidopsis species.

Yant L, Bomblies K.

Curr Opin Plant Biol. 2017 Apr;36:9-14. doi: 10.1016/j.pbi.2016.11.018. Epub 2016 Dec 16. Review.

PMID:
27988391
10.

Borrowed alleles and convergence in serpentine adaptation.

Arnold BJ, Lahner B, DaCosta JM, Weisman CM, Hollister JD, Salt DE, Bomblies K, Yant L.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8320-5. doi: 10.1073/pnas.1600405113. Epub 2016 Jun 29.

11.

Genome management and mismanagement--cell-level opportunities and challenges of whole-genome duplication.

Yant L, Bomblies K.

Genes Dev. 2015 Dec 1;29(23):2405-19. doi: 10.1101/gad.271072.115. Review.

12.

DNA-Binding Factor Target Identification by Chromatin Immunoprecipitation (ChIP) in Plants.

Posé D, Yant L.

Methods Mol Biol. 2016;1363:25-35. doi: 10.1007/978-1-4939-3115-6_3.

PMID:
26577778
13.

Meiosis evolves: adaptation to external and internal environments.

Bomblies K, Higgins JD, Yant L.

New Phytol. 2015 Oct;208(2):306-23. doi: 10.1111/nph.13499. Epub 2015 Jun 15. Review.

14.

When two is a crowd: mitochondrial genome merger and its aftermath.

Yant L.

New Phytol. 2015 Apr;206(1):8-9. doi: 10.1111/nph.13321. No abstract available.

15.

Molecular basis for three-dimensional elaboration of the Aquilegia petal spur.

Yant L, Collani S, Puzey J, Levy C, Kramer EM.

Proc Biol Sci. 2015 Mar 22;282(1803):20142778. doi: 10.1098/rspb.2014.2778.

16.

Understanding the development and evolution of novel floral form in Aquilegia.

Sharma B, Yant L, Hodges SA, Kramer EM.

Curr Opin Plant Biol. 2014 Feb;17:22-7. doi: 10.1016/j.pbi.2013.10.006. Epub 2013 Nov 15. Review.

PMID:
24507490
17.

Meiotic adaptation to genome duplication in Arabidopsis arenosa.

Yant L, Hollister JD, Wright KM, Arnold BJ, Higgins JD, Franklin FCH, Bomblies K.

Curr Biol. 2013 Nov 4;23(21):2151-6. doi: 10.1016/j.cub.2013.08.059. Epub 2013 Oct 17.

18.

Temperature-dependent regulation of flowering by antagonistic FLM variants.

Posé D, Verhage L, Ott F, Yant L, Mathieu J, Angenent GC, Immink RG, Schmid M.

Nature. 2013 Nov 21;503(7476):414-7. doi: 10.1038/nature12633. Epub 2013 Sep 25.

PMID:
24067612
19.

The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element.

Dinh TT, Girke T, Liu X, Yant L, Schmid M, Chen X.

Development. 2012 Jun;139(11):1978-86. doi: 10.1242/dev.077073. Epub 2012 Apr 18.

20.
21.

The recombination landscape in Arabidopsis thaliana F2 populations.

Salomé PA, Bomblies K, Fitz J, Laitinen RA, Warthmann N, Yant L, Weigel D.

Heredity (Edinb). 2012 Apr;108(4):447-55. doi: 10.1038/hdy.2011.95. Epub 2011 Nov 9.

22.

The end of innocence: flowering networks explode in complexity.

Posé D, Yant L, Schmid M.

Curr Opin Plant Biol. 2012 Feb;15(1):45-50. doi: 10.1016/j.pbi.2011.09.002. Epub 2011 Oct 3. Review.

PMID:
21974961
23.

Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor.

Moyroud E, Minguet EG, Ott F, Yant L, Posé D, Monniaux M, Blanchet S, Bastien O, Thévenon E, Weigel D, Schmid M, Parcy F.

Plant Cell. 2011 Apr;23(4):1293-306. doi: 10.1105/tpc.111.083329. Epub 2011 Apr 22.

24.

Genetic architecture of flowering-time variation in Arabidopsis thaliana.

Salomé PA, Bomblies K, Laitinen RA, Yant L, Mott R, Weigel D.

Genetics. 2011 Jun;188(2):421-33. doi: 10.1534/genetics.111.126607. Epub 2011 Mar 15.

25.

Orchestration of the floral transition and floral development in Arabidopsis by the bifunctional transcription factor APETALA2.

Yant L, Mathieu J, Dinh TT, Ott F, Lanz C, Wollmann H, Chen X, Schmid M.

Plant Cell. 2010 Jul;22(7):2156-70. doi: 10.1105/tpc.110.075606. Epub 2010 Jul 30.

26.

Local-scale patterns of genetic variability, outcrossing, and spatial structure in natural stands of Arabidopsis thaliana.

Bomblies K, Yant L, Laitinen RA, Kim ST, Hollister JD, Warthmann N, Fitz J, Weigel D.

PLoS Genet. 2010 Mar 26;6(3):e1000890. doi: 10.1371/journal.pgen.1000890.

27.

Just say no: floral repressors help Arabidopsis bide the time.

Yant L, Mathieu J, Schmid M.

Curr Opin Plant Biol. 2009 Oct;12(5):580-6. doi: 10.1016/j.pbi.2009.07.006. Epub 2009 Aug 18. Review.

PMID:
19695946
28.

Repression of flowering by the miR172 target SMZ.

Mathieu J, Yant LJ, Mürdter F, Küttner F, Schmid M.

PLoS Biol. 2009 Jul;7(7):e1000148. doi: 10.1371/journal.pbio.1000148. Epub 2009 Jul 7.

29.

Comprehensive immunological evaluation reveals surprisingly few differences between elite controller and progressor Mamu-B*17-positive simian immunodeficiency virus-infected rhesus macaques.

Maness NJ, Yant LJ, Chung C, Loffredo JT, Friedrich TC, Piaskowski SM, Furlott J, May GE, Soma T, León EJ, Wilson NA, Piontkivska H, Hughes AL, Sidney J, Sette A, Watkins DI.

J Virol. 2008 Jun;82(11):5245-54. doi: 10.1128/JVI.00292-08. Epub 2008 Apr 2.

30.

Subdominant CD8+ T-cell responses are involved in durable control of AIDS virus replication.

Friedrich TC, Valentine LE, Yant LJ, Rakasz EG, Piaskowski SM, Furlott JR, Weisgrau KL, Burwitz B, May GE, León EJ, Soma T, Napoe G, Capuano SV 3rd, Wilson NA, Watkins DI.

J Virol. 2007 Apr;81(7):3465-76. Epub 2007 Jan 24.

31.

Control of simian immunodeficiency virus SIVmac239 is not predicted by inheritance of Mamu-B*17-containing haplotypes.

Wojcechowskyj JA, Yant LJ, Wiseman RW, O'Connor SL, O'Connor DH.

J Virol. 2007 Jan;81(1):406-10. Epub 2006 Nov 1.

32.

Vaccine-induced cellular immune responses reduce plasma viral concentrations after repeated low-dose challenge with pathogenic simian immunodeficiency virus SIVmac239.

Wilson NA, Reed J, Napoe GS, Piaskowski S, Szymanski A, Furlott J, Gonzalez EJ, Yant LJ, Maness NJ, May GE, Soma T, Reynolds MR, Rakasz E, Rudersdorf R, McDermott AB, O'Connor DH, Friedrich TC, Allison DB, Patki A, Picker LJ, Burton DR, Lin J, Huang L, Patel D, Heindecker G, Fan J, Citron M, Horton M, Wang F, Liang X, Shiver JW, Casimiro DR, Watkins DI.

J Virol. 2006 Jun;80(12):5875-85.

33.

The high-frequency major histocompatibility complex class I allele Mamu-B*17 is associated with control of simian immunodeficiency virus SIVmac239 replication.

Yant LJ, Friedrich TC, Johnson RC, May GE, Maness NJ, Enz AM, Lifson JD, O'Connor DH, Carrington M, Watkins DI.

J Virol. 2006 May;80(10):5074-7. Erratum in: J Virol. 2006 Jul;80(13):6720.

34.

Tat(28-35)SL8-specific CD8+ T lymphocytes are more effective than Gag(181-189)CM9-specific CD8+ T lymphocytes at suppressing simian immunodeficiency virus replication in a functional in vitro assay.

Loffredo JT, Rakasz EG, Giraldo JP, Spencer SP, Grafton KK, Martin SR, Napoé G, Yant LJ, Wilson NA, Watkins DI.

J Virol. 2005 Dec;79(23):14986-91.

35.

A dominant role for CD8+-T-lymphocyte selection in simian immunodeficiency virus sequence variation.

O'Connor DH, McDermott AB, Krebs KC, Dodds EJ, Miller JE, Gonzalez EJ, Jacoby TJ, Yant L, Piontkivska H, Pantophlet R, Burton DR, Rehrauer WM, Wilson N, Hughes AL, Watkins DI.

J Virol. 2004 Dec;78(24):14012-22.

36.

Consequences of cytotoxic T-lymphocyte escape: common escape mutations in simian immunodeficiency virus are poorly recognized in naive hosts.

Friedrich TC, McDermott AB, Reynolds MR, Piaskowski S, Fuenger S, De Souza IP, Rudersdorf R, Cullen C, Yant LJ, Vojnov L, Stephany J, Martin S, O'Connor DH, Wilson N, Watkins DI.

J Virol. 2004 Sep;78(18):10064-73.

38.

Reversion of CTL escape-variant immunodeficiency viruses in vivo.

Friedrich TC, Dodds EJ, Yant LJ, Vojnov L, Rudersdorf R, Cullen C, Evans DT, Desrosiers RC, Mothé BR, Sidney J, Sette A, Kunstman K, Wolinsky S, Piatak M, Lifson J, Hughes AL, Wilson N, O'Connor DH, Watkins DI.

Nat Med. 2004 Mar;10(3):275-81. Epub 2004 Feb 15.

PMID:
14966520
39.

Extraepitopic compensatory substitutions partially restore fitness to simian immunodeficiency virus variants that escape from an immunodominant cytotoxic-T-lymphocyte response.

Friedrich TC, Frye CA, Yant LJ, O'Connor DH, Kriewaldt NA, Benson M, Vojnov L, Dodds EJ, Cullen C, Rudersdorf R, Hughes AL, Wilson N, Watkins DI.

J Virol. 2004 Mar;78(5):2581-5.

40.

The selenoprotein GPX4 is essential for mouse development and protects from radiation and oxidative damage insults.

Yant LJ, Ran Q, Rao L, Van Remmen H, Shibatani T, Belter JG, Motta L, Richardson A, Prolla TA.

Free Radic Biol Med. 2003 Feb 15;34(4):496-502.

PMID:
12566075

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