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Items: 1 to 50 of 229


Identification of Aquatic Organisms Using a Magneto-Optical Element.

Oguma K, Sato T, Kawahara T, Haramoto Y, Yamanishi Y.

Sensors (Basel). 2019 Jul 24;19(15). pii: E3254. doi: 10.3390/s19153254.


Acromioclavicular joint arthritis as the first manifestation of Austrian syndrome.

Miyaue N, Yamanishi Y, Tada S, Ando R, Yabe H, Nagai M.

J Infect Chemother. 2019 Jul 9. pii: S1341-321X(19)30196-5. doi: 10.1016/j.jiac.2019.06.009. [Epub ahead of print]


Plasma-Induced Bubble Microjet Metallization of Elastomer.

Ichikawa K, Basaki N, Yamashita Y, Yamanishi Y.

Micromachines (Basel). 2019 Jun 11;10(6). pii: E389. doi: 10.3390/mi10060389.


A new and practical Se(IV) removal method using Fe3+ type cation exchange resin.

Kawamoto D, Yamanishi Y, Ohashi H, Yonezu K, Honma T, Sugiyama T, Kobayashi Y, Okaue Y, Miyazaki A, Yokoyama T.

J Hazard Mater. 2019 May 31;378:120593. doi: 10.1016/j.jhazmat.2019.04.076. [Epub ahead of print]


Phenotypic Diversity of Myoclonus Epilepsy Associated with Ragged-red Fibers with an 8344A>G mtDNA Mutation.

Miyaue N, Yamanishi Y, Tada S, Ando R, Nagai M, Nomoto M.

Intern Med. 2019 Jun 7. doi: 10.2169/internalmedicine.2416-18. [Epub ahead of print] No abstract available.


IL-3 Triggers Chronic Rejection of Cardiac Allografts by Activation of Infiltrating Basophils.

Balam S, Schiechl-Brachner G, Buchtler S, Halbritter D, Schmidbauer K, Talke Y, Neumayer S, Salewski JN, Winter F, Karasuyama H, Yamanishi Y, Renner K, Geissler EK, Mack M.

J Immunol. 2019 Jun 15;202(12):3514-3523. doi: 10.4049/jimmunol.1801269. Epub 2019 May 8.


Relationship between parenting stress and children's behavioral characteristics in Japan.

Tokunaga A, Iwanaga R, Yamanishi Y, Higashionna T, Tanaka K, Nakane H, Tanaka G.

Pediatr Int. 2019 Jul;61(7):652-657. doi: 10.1111/ped.13876. Epub 2019 Jul 9.


Pivotal role of STIM2, but not STIM1, in IL-4 production by IL-3-stimulated murine basophils.

Yoshikawa S, Oh-Hora M, Hashimoto R, Nagao T, Peters L, Egawa M, Ohta T, Miyake K, Adachi T, Kawano Y, Yamanishi Y, Karasuyama H.

Sci Signal. 2019 Apr 9;12(576). pii: eaav2060. doi: 10.1126/scisignal.aav2060.


Network-based characterization of drug-protein interaction signatures with a space-efficient approach.

Tabei Y, Kotera M, Sawada R, Yamanishi Y.

BMC Syst Biol. 2019 Apr 5;13(Suppl 2):39. doi: 10.1186/s12918-019-0691-1.


A case of ADEM-like presentation with anti-MOG antibody following tumefactive demyelinating lesion.

Miyaue N, Yamanishi Y, Tada S, Ando R, Yabe H, Nagai M, Nomoto M.

Mult Scler Relat Disord. 2019 Jun;31:62-64. doi: 10.1016/j.msard.2019.03.018. Epub 2019 Mar 26.


Chemoinformatics and structural bioinformatics in OCaml.

Berenger F, Zhang KYJ, Yamanishi Y.

J Cheminform. 2019 Feb 5;11(1):10. doi: 10.1186/s13321-019-0332-0.


Repetitive brainstem lesions in mitochondrial DNA 11778G>A mutation of Leber hereditary optic neuropathy.

Miyaue N, Yamanishi Y, Tada S, Ando R, Yabe H, Nagai M, Nomoto M.

eNeurologicalSci. 2019 Jan 11;14:74-76. doi: 10.1016/j.ensci.2019.01.002. eCollection 2019 Mar.


The phytosphingosine-CD300b interaction promotes zymosan-induced, nitric oxide-dependent neutrophil recruitment.

Takahashi M, Izawa K, Urai M, Yamanishi Y, Maehara A, Isobe M, Matsukawa T, Kaitani A, Takamori A, Uchida S, Yamada H, Nagamine M, Ando T, Shimizu T, Ogawa H, Okumura K, Kinjo Y, Kitamura T, Kitaura J.

Sci Signal. 2019 Jan 15;12(564). pii: eaar5514. doi: 10.1126/scisignal.aar5514.


A Distance-Based Boolean Applicability Domain for Classification of High Throughput Screening Data.

Berenger F, Yamanishi Y.

J Chem Inf Model. 2019 Jan 28;59(1):463-476. doi: 10.1021/acs.jcim.8b00499. Epub 2019 Jan 8.


The Use of Large-Scale Chemically-Induced Transcriptome Data Acquired from LINCS to Study Small Molecules.

Iwata M, Yamanishi Y.

Methods Mol Biol. 2019;1888:189-203. doi: 10.1007/978-1-4939-8891-4_11.


Basophils trigger emphysema development in a murine model of COPD through IL-4-mediated generation of MMP-12-producing macrophages.

Shibata S, Miyake K, Tateishi T, Yoshikawa S, Yamanishi Y, Miyazaki Y, Inase N, Karasuyama H.

Proc Natl Acad Sci U S A. 2018 Dec 18;115(51):13057-13062. doi: 10.1073/pnas.1813927115. Epub 2018 Dec 3.


MIBG myocardial scintigraphy in progressive supranuclear palsy.

Kamada T, Miura S, Kida H, Irie KI, Yamanishi Y, Hoshino T, Taniwaki T.

J Neurol Sci. 2019 Jan 15;396:3-7. doi: 10.1016/j.jns.2018.10.019. Epub 2018 Oct 22.


Pathway-Based Drug Repositioning for Cancers: Computational Prediction and Experimental Validation.

Iwata M, Hirose L, Kohara H, Liao J, Sawada R, Akiyoshi S, Tani K, Yamanishi Y.

J Med Chem. 2018 Nov 8;61(21):9583-9595. doi: 10.1021/acs.jmedchem.8b01044. Epub 2018 Oct 29.


Linear and Kernel Model Construction Methods for Predicting Drug-Target Interactions in a Chemogenomic Framework.

Yamanishi Y.

Methods Mol Biol. 2018;1825:355-368. doi: 10.1007/978-1-4939-8639-2_12.


Aggregation makes a protein allergenic at the challenge phase of basophil-mediated allergy in mice.

Nagao T, Yamanishi Y, Miyake K, Teranishi M, Takahashi S, Yoshikawa S, Kawano Y, Karasuyama H.

Int Immunol. 2019 Feb 6;31(1):41-49. doi: 10.1093/intimm/dxy062.


How do basophils contribute to Th2 cell differentiation and allergic responses?

Karasuyama H, Miyake K, Yoshikawa S, Kawano Y, Yamanishi Y.

Int Immunol. 2018 Aug 30;30(9):391-396. doi: 10.1093/intimm/dxy026. Review.


Mirabegron or tolterodine for the treatment of overactive bladder in Japan: Which drug is more cost-effective as the first-line treatment?

Yamanishi Y, Yamanishi T, Tajima H, Ikeda S.

Int J Urol. 2018 Oct;25(10):863-870. doi: 10.1111/iju.13764. Epub 2018 Aug 15.


KampoDB, database of predicted targets and functional annotations of natural medicines.

Sawada R, Iwata M, Umezaki M, Usui Y, Kobayashi T, Kubono T, Hayashi S, Kadowaki M, Yamanishi Y.

Sci Rep. 2018 Jul 25;8(1):11216. doi: 10.1038/s41598-018-29516-1.


Histamine Released From Skin-Infiltrating Basophils but Not Mast Cells Is Crucial for Acquired Tick Resistance in Mice.

Tabakawa Y, Ohta T, Yoshikawa S, Robinson EJ, Yamaji K, Ishiwata K, Kawano Y, Miyake K, Yamanishi Y, Ohtsu H, Adachi T, Watanabe N, Kanuka H, Karasuyama H.

Front Immunol. 2018 Jul 3;9:1540. doi: 10.3389/fimmu.2018.01540. eCollection 2018.


Sparse Modeling to Analyze Drug-Target Interaction Networks.

Yamanishi Y.

Methods Mol Biol. 2018;1807:181-193. doi: 10.1007/978-1-4939-8561-6_13.


Falling After Starting Running in a Case of Myoclonus Epilepsy Associated with Ragged-red Fibers with a 8344A>G mtDNA Mutation.

Miyaue N, Yamanishi Y, Tada S, Ando R, Nagai M, Nomoto M.

Intern Med. 2018 Dec 1;57(23):3439-3443. doi: 10.2169/internalmedicine.1210-18. Epub 2018 Jul 6.


Leukocyte mono-immunoglobulin-like receptor 8 (LMIR8)/CLM-6 is an FcRγ-coupled receptor selectively expressed in mouse tissue plasmacytoid dendritic cells.

Kaitani A, Izawa K, Maehara A, Isobe M, Takamori A, Matsukawa T, Takahashi M, Yamanishi Y, Oki T, Yamada H, Nagamine M, Uchida S, Uchida K, Ando T, Maeda K, Nakano N, Shimizu T, Takai T, Ogawa H, Okumura K, Kitamura T, Kitaura J.

Sci Rep. 2018 May 29;8(1):8259. doi: 10.1038/s41598-018-25646-8.


Modafinil alleviates levodopa-induced excessive nighttime sleepiness and restores monoaminergic systems in a nocturnal animal model of Parkinson's disease.

Ando R, Choudhury ME, Yamanishi Y, Kyaw WT, Kubo M, Kannou M, Nishikawa N, Tanaka J, Nomoto M, Nagai M.

J Pharmacol Sci. 2018 Apr;136(4):266-271. doi: 10.1016/j.jphs.2018.03.005. Epub 2018 Mar 31.


The CD300e molecule in mice is an immune-activating receptor.

Isobe M, Izawa K, Sugiuchi M, Sakanishi T, Kaitani A, Takamori A, Maehara A, Matsukawa T, Takahashi M, Yamanishi Y, Oki T, Uchida S, Uchida K, Ando T, Maeda K, Nakano N, Yagita H, Takai T, Ogawa H, Okumura K, Kitamura T, Kitaura J.

J Biol Chem. 2018 Mar 9;293(10):3793-3805. doi: 10.1074/jbc.RA117.000696. Epub 2018 Jan 22.


Predicting inhibitory and activatory drug targets by chemically and genetically perturbed transcriptome signatures.

Sawada R, Iwata M, Tabei Y, Yamato H, Yamanishi Y.

Sci Rep. 2018 Jan 9;8(1):156. doi: 10.1038/s41598-017-18315-9.


Multifaceted roles of basophils in health and disease.

Karasuyama H, Miyake K, Yoshikawa S, Yamanishi Y.

J Allergy Clin Immunol. 2018 Aug;142(2):370-380. doi: 10.1016/j.jaci.2017.10.042. Epub 2017 Dec 14. Review.


Skin CD4+ Memory T Cells Play an Essential Role in Acquired Anti-Tick Immunity through Interleukin-3-Mediated Basophil Recruitment to Tick-Feeding Sites.

Ohta T, Yoshikawa S, Tabakawa Y, Yamaji K, Ishiwata K, Shitara H, Taya C, Oh-Hora M, Kawano Y, Miyake K, Yamanishi Y, Yonekawa H, Watanabe N, Kanuka H, Karasuyama H.

Front Immunol. 2017 Oct 16;8:1348. doi: 10.3389/fimmu.2017.01348. eCollection 2017.


Differential usage of COX-1 and COX-2 in prostaglandin production by mast cells and basophils.

Bando T, Fujita S, Nagano N, Yoshikawa S, Yamanishi Y, Minami M, Karasuyama H.

Biochem Biophys Rep. 2017 Mar 15;10:82-87. doi: 10.1016/j.bbrep.2017.03.004. eCollection 2017 Jul.


Recent advances in understanding basophil-mediated Th2 immune responses.

Yamanishi Y, Miyake K, Iki M, Tsutsui H, Karasuyama H.

Immunol Rev. 2017 Jul;278(1):237-245. doi: 10.1111/imr.12548. Review.


Disrupting ceramide-CD300f interaction prevents septic peritonitis by stimulating neutrophil recruitment.

Izawa K, Maehara A, Isobe M, Yasuda Y, Urai M, Hoshino Y, Ueno K, Matsukawa T, Takahashi M, Kaitani A, Shiba E, Takamori A, Uchida S, Uchida K, Maeda K, Nakano N, Yamanishi Y, Oki T, Voehringer D, Roers A, Nakae S, Ishikawa J, Kinjo Y, Shimizu T, Ogawa H, Okumura K, Kitamura T, Kitaura J.

Sci Rep. 2017 Jun 27;7(1):4298. doi: 10.1038/s41598-017-04647-z.


In vitro fatigue tests and in silico finite element analysis of dental implants with different fixture/abutment joint types using computer-aided design models.

Yamaguchi S, Yamanishi Y, Machado LS, Matsumoto S, Tovar N, Coelho PG, Thompson VP, Imazato S.

J Prosthodont Res. 2018 Jan;62(1):24-30. doi: 10.1016/j.jpor.2017.03.006. Epub 2017 Apr 17.


Clinical benefit of 1-year certolizumab pegol (CZP) add-on therapy to methotrexate treatment in patients with early rheumatoid arthritis was observed following CZP discontinuation: 2-year results of the C-OPERA study, a phase III randomised trial.

Atsumi T, Tanaka Y, Yamamoto K, Takeuchi T, Yamanaka H, Ishiguro N, Eguchi K, Watanabe A, Origasa H, Yasuda S, Yamanishi Y, Kita Y, Matsubara T, Iwamoto M, Shoji T, Togo O, Okada T, van der Heijde D, Miyasaka N, Koike T.

Ann Rheum Dis. 2017 Aug;76(8):1348-1356. doi: 10.1136/annrheumdis-2016-210246. Epub 2017 Feb 2.


Trogocytosis of peptide-MHC class II complexes from dendritic cells confers antigen-presenting ability on basophils.

Miyake K, Shiozawa N, Nagao T, Yoshikawa S, Yamanishi Y, Karasuyama H.

Proc Natl Acad Sci U S A. 2017 Jan 31;114(5):1111-1116. doi: 10.1073/pnas.1615973114. Epub 2017 Jan 17.


Elucidating the modes of action for bioactive compounds in a cell-specific manner by large-scale chemically-induced transcriptomics.

Iwata M, Sawada R, Iwata H, Kotera M, Yamanishi Y.

Sci Rep. 2017 Jan 10;7:40164. doi: 10.1038/srep40164.


The Basophil-specific Protease mMCP-8 Provokes an Inflammatory Response in the Skin with Microvascular Hyperpermeability and Leukocyte Infiltration.

Tsutsui H, Yamanishi Y, Ohtsuka H, Sato S, Yoshikawa S, Karasuyama H.

J Biol Chem. 2017 Jan 20;292(3):1061-1067. doi: 10.1074/jbc.M116.754648. Epub 2016 Dec 8.


Novel CD200 homologues iSEC1 and iSEC2 are gastrointestinal secretory cell-specific ligands of inhibitory receptor CD200R.

Kojima T, Tsuchiya K, Ikemizu S, Yoshikawa S, Yamanishi Y, Watanabe M, Karasuyama H.

Sci Rep. 2016 Nov 7;6:36457. doi: 10.1038/srep36457.


Analysis of bone metabolism during early stage and clinical benefits of early intervention with alendronate in patients with systemic rheumatic diseases treated with high-dose glucocorticoid: Early DIagnosis and Treatment of OsteopoRosis in Japan (EDITOR-J) study.

Tanaka Y, Mori H, Aoki T, Atsumi T, Kawahito Y, Nakayama H, Tohma S, Yamanishi Y, Hasegawa H, Tanimura K, Negoro N, Ueki Y, Kawakami A, Eguchi K, Saito K, Okada Y.

J Bone Miner Metab. 2016 Nov;34(6):646-654. Epub 2015 Aug 26.


Basophil tryptase mMCP-11 plays a crucial role in IgE-mediated, delayed-onset allergic inflammation in mice.

Iki M, Tanaka K, Deki H, Fujimaki M, Sato S, Yoshikawa S, Yamanishi Y, Karasuyama H.

Blood. 2016 Dec 22;128(25):2909-2918. doi: 10.1182/blood-2016-07-729392. Epub 2016 Oct 27.


Real-time imaging of mast cell degranulation in vitro and in vivo.

Horiguchi K, Yoshikawa S, Saito A, Haddad S, Ohta T, Miyake K, Yamanishi Y, Karasuyama H.

Biochem Biophys Res Commun. 2016 Oct 21;479(3):517-522. doi: 10.1016/j.bbrc.2016.09.100. Epub 2016 Sep 21.


Influence of Implant Length and Diameter, Bicortical Anchorage, and Sinus Augmentation on Bone Stress Distribution: Three-Dimensional Finite Element Analysis.

Moriwaki H, Yamaguchi S, Nakano T, Yamanishi Y, Imazato S, Yatani H.

Int J Oral Maxillofac Implants. 2016 Jul-Aug;31(4):e84-91. doi: 10.11607/jomi.4217.


Basophils and mast cells in immunity and inflammation.

Yamanishi Y, Karasuyama H.

Semin Immunopathol. 2016 Sep;38(5):535-7. doi: 10.1007/s00281-016-0582-0. Epub 2016 Jul 12. No abstract available.


Simultaneous prediction of enzyme orthologs from chemical transformation patterns for de novo metabolic pathway reconstruction.

Tabei Y, Yamanishi Y, Kotera M.

Bioinformatics. 2016 Jun 15;32(12):i278-i287. doi: 10.1093/bioinformatics/btw260.


Invasive cervical cancer accompanied by IgG4-related disease.

Mizuno R, Yamanishi Y, Uda S, Terashima T, Higashi T, Higuchi T.

J Obstet Gynaecol Res. 2016 Sep;42(9):1198-202. doi: 10.1111/jog.13030. Epub 2016 May 29.


GGIP: Structure and sequence-based GPCR-GPCR interaction pair predictor.

Nemoto W, Yamanishi Y, Limviphuvadh V, Saito A, Toh H.

Proteins. 2016 Sep;84(9):1224-33. doi: 10.1002/prot.25071. Epub 2016 Jun 8.


Basophil-derived IL-4 plays versatile roles in immunity.

Yamanishi Y, Karasuyama H.

Semin Immunopathol. 2016 Sep;38(5):615-22. doi: 10.1007/s00281-016-0568-y. Epub 2016 May 10. Review.


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