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Items: 13

1.

Defining host-pathogen interactions employing an artificial intelligence workflow.

Fisch D, Yakimovich A, Clough B, Wright J, Bunyan M, Howell M, Mercer J, Frickel E.

Elife. 2019 Feb 12;8. pii: e40560. doi: 10.7554/eLife.40560.

2.

Label-Free Digital Holo-tomographic Microscopy Reveals Virus-Induced Cytopathic Effects in Live Cells.

Yakimovich A, Witte R, Andriasyan V, Georgi F, Greber UF.

mSphere. 2018 Nov 21;3(6). pii: e00599-18. doi: 10.1128/mSphereDirect.00599-18.

3.

Vaccinia virus hijacks EGFR signalling to enhance virus spread through rapid and directed infected cell motility.

Beerli C, Yakimovich A, Kilcher S, Reynoso GV, Fläschner G, Müller DJ, Hickman HD, Mercer J.

Nat Microbiol. 2019 Feb;4(2):216-225. doi: 10.1038/s41564-018-0288-2. Epub 2018 Nov 12.

4.

Concepts in Light Microscopy of Viruses.

Witte R, Andriasyan V, Georgi F, Yakimovich A, Greber UF.

Viruses. 2018 Apr 18;10(4). pii: E202. doi: 10.3390/v10040202. Review.

5.

Imaging, Tracking and Computational Analyses of Virus Entry and Egress with the Cytoskeleton.

Wang IH, Burckhardt CJ, Yakimovich A, Greber UF.

Viruses. 2018 Mar 31;10(4). pii: E166. doi: 10.3390/v10040166. Review.

6.

Inhibition of Poxvirus Gene Expression and Genome Replication by Bisbenzimide Derivatives.

Yakimovich A, Huttunen M, Zehnder B, Coulter LJ, Gould V, Schneider C, Kopf M, McInnes CJ, Greber UF, Mercer J.

J Virol. 2017 Aug 24;91(18). pii: e00838-17. doi: 10.1128/JVI.00838-17. Print 2017 Sep 15.

7.

Cell Cycle-Dependent Expression of Adeno-Associated Virus 2 (AAV2) Rep in Coinfections with Herpes Simplex Virus 1 (HSV-1) Gives Rise to a Mosaic of Cells Replicating either AAV2 or HSV-1.

Franzoso FD, Seyffert M, Vogel R, Yakimovich A, de Andrade Pereira B, Meier AF, Sutter SO, Tobler K, Vogt B, Greber UF, Büning H, Ackermann M, Fraefel C.

J Virol. 2017 Jul 12;91(15). pii: e00357-17. doi: 10.1128/JVI.00357-17. Print 2017 Aug 1.

8.

The nuclear export factor CRM1 controls juxta-nuclear microtubule-dependent virus transport.

Wang IH, Burckhardt CJ, Yakimovich A, Morf MK, Greber UF.

J Cell Sci. 2017 Jul 1;130(13):2185-2195. doi: 10.1242/jcs.203794. Epub 2017 May 17.

9.

Infectio: a Generic Framework for Computational Simulation of Virus Transmission between Cells.

Yakimovich A, Yakimovich Y, Schmid M, Mercer J, Sbalzarini IF, Greber UF.

mSphere. 2016 Feb 10;1(1). pii: e00078-15. doi: 10.1128/mSphere.00078-15. eCollection 2016 Jan-Feb.

10.

Plaque2.0-A High-Throughput Analysis Framework to Score Virus-Cell Transmission and Clonal Cell Expansion.

Yakimovich A, Andriasyan V, Witte R, Wang IH, Prasad V, Suomalainen M, Greber UF.

PLoS One. 2015 Sep 28;10(9):e0138760. doi: 10.1371/journal.pone.0138760. eCollection 2015.

11.

Simultaneous analysis of large-scale RNAi screens for pathogen entry.

Rämö P, Drewek A, Arrieumerlou C, Beerenwinkel N, Ben-Tekaya H, Cardel B, Casanova A, Conde-Alvarez R, Cossart P, Csúcs G, Eicher S, Emmenlauer M, Greber U, Hardt WD, Helenius A, Kasper C, Kaufmann A, Kreibich S, Kühbacher A, Kunszt P, Low SH, Mercer J, Mudrak D, Muntwiler S, Pelkmans L, Pizarro-Cerdá J, Podvinec M, Pujadas E, Rinn B, Rouilly V, Schmich F, Siebourg-Polster J, Snijder B, Stebler M, Studer G, Szczurek E, Truttmann M, von Mering C, Vonderheit A, Yakimovich A, Bühlmann P, Dehio C.

BMC Genomics. 2014 Dec 22;15:1162. doi: 10.1186/1471-2164-15-1162.

12.

Chemical induction of unfolded protein response enhances cancer cell killing through lytic virus infection.

Prasad V, Suomalainen M, Pennauer M, Yakimovich A, Andriasyan V, Hemmi S, Greber UF.

J Virol. 2014 Nov;88(22):13086-98. doi: 10.1128/JVI.02156-14. Epub 2014 Sep 3.

13.

Cell-free transmission of human adenovirus by passive mass transfer in cell culture simulated in a computer model.

Yakimovich A, Gumpert H, Burckhardt CJ, Lütschg VA, Jurgeit A, Sbalzarini IF, Greber UF.

J Virol. 2012 Sep;86(18):10123-37. doi: 10.1128/JVI.01102-12. Epub 2012 Jul 11.

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