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Items: 1 to 50 of 118

1.

Discovering weaker genetic associations guided by known associations.

Wang H, Vanyukov MM, Xing EP, Wu W.

BMC Med Genomics. 2020 Feb 24;13(Suppl 3):19. doi: 10.1186/s12920-020-0667-4.

2.

Lnc-MEG3 acts as a potential biomarker for predicting increased disease risk, systemic inflammation, disease severity, and poor prognosis of sepsis via interacting with miR-21.

Na L, Ding H, Xing E, Gao J, Liu B, Wang H, Yu J, Yu C.

J Clin Lab Anal. 2020 Jan 6:e23123. doi: 10.1002/jcla.23123. [Epub ahead of print]

PMID:
31907972
3.

Deep mixed model for marginal epistasis detection and population stratification correction in genome-wide association studies.

Wang H, Yue T, Yang J, Wu W, Xing EP.

BMC Bioinformatics. 2019 Dec 27;20(Suppl 23):656. doi: 10.1186/s12859-019-3300-9.

4.

The predictive value of microRNA-21 for sepsis risk and its correlation with disease severity, systemic inflammation, and 28-day mortality in sepsis patients.

Na L, Ding H, Xing E, Zhang Y, Gao J, Liu B, Yu J, Zhao Y.

J Clin Lab Anal. 2020 Mar;34(3):e23103. doi: 10.1002/jcla.23103. Epub 2019 Nov 28.

5.

Overexpression of CASC2 Improves Cisplatin Sensitivity in Hepatocellular Carcinoma Through Sponging miR-222.

Liu Z, Dang C, Xing E, Zhao M, Shi L, Sun J.

DNA Cell Biol. 2019 Nov;38(11):1366-1373. doi: 10.1089/dna.2019.4882. Epub 2019 Oct 18.

PMID:
31633393
6.

Effects of dioscin on T helper 17 and regulatory T-cell subsets in chicken collagen type II-induced arthritis mice.

Xing E, Guo Y, Feng G, Song H, An G, Zhao X, Wang M.

J Chin Med Assoc. 2019 Mar;82(3):202-208. doi: 10.1097/JCMA.0000000000000029.

PMID:
30913116
7.

Automatic Human-like Mining and Constructing Reliable Genetic Association Database with Deep Reinforcement Learning.

Wang H, Liu X, Tao Y, Ye W, Jin Q, Cohen WW, Xing EP.

Pac Symp Biocomput. 2019;24:112-123.

9.

Hypersensitive IFN Responses in Lupus Keratinocytes Reveal Key Mechanistic Determinants in Cutaneous Lupus.

Tsoi LC, Hile GA, Berthier CC, Sarkar MK, Reed TJ, Liu J, Uppala R, Patrick M, Raja K, Xing X, Xing E, He K, Gudjonsson JE, Kahlenberg JM.

J Immunol. 2019 Apr 1;202(7):2121-2130. doi: 10.4049/jimmunol.1800650. Epub 2019 Feb 11.

10.

ConnNet: A Long-Range Relation-Aware Pixel-Connectivity Network for Salient Segmentation.

Kampffmeyer M, Dong N, Liang X, Zhang Y, Xing EP.

IEEE Trans Image Process. 2018 Dec 14. doi: 10.1109/TIP.2018.2886997. [Epub ahead of print]

PMID:
30571633
11.

Dynamically tunable multi-lobe laser generation via multifocal curved beam.

Xing E, Gao H, Rong J, Khew SY, Liu H, Tong C, Hong M.

Opt Express. 2018 Nov 12;26(23):30944-30951. doi: 10.1364/OE.26.030944.

PMID:
30469984
12.

Sericin enhances the insulin-PI3K/AKT signaling pathway in the liver of a type 2 diabetes rat model.

Song C, Liu D, Yang S, Cheng L, Xing E, Chen Z.

Exp Ther Med. 2018 Oct;16(4):3345-3352. doi: 10.3892/etm.2018.6615. Epub 2018 Aug 17.

13.

Estrogen receptor β promotes the vasculogenic mimicry (VM) and cell invasion via altering the lncRNA-MALAT1/miR-145-5p/NEDD9 signals in lung cancer.

Yu W, Ding J, He M, Chen Y, Wang R, Han Z, Xing EZ, Zhang C, Yeh S.

Oncogene. 2019 Feb;38(8):1225-1238. doi: 10.1038/s41388-018-0463-1. Epub 2018 Sep 24.

PMID:
30250297
14.

Targeting the androgen receptor (AR) with AR degradation enhancer ASC-J9® led to increase docetaxel sensitivity via suppressing the p21 expression.

Luo J, Tian J, Chou F, Lin C, Xing EZ, Zuo L, Niu Y, Yeh S, Chang C.

Cancer Lett. 2019 Mar 1;444:35-44. doi: 10.1016/j.canlet.2018.09.025. Epub 2018 Sep 21.

PMID:
30248372
15.

Size-Dependent Effect of Cu₂O Nanocubes in Electrochemical and Photocatalytic Properties.

Tang Y, Xu Y, Qi C, Li X, Xing E, Wang F, Kan Z, Wang C, Tang J, Zheng G, Zhang K, Wang X, Li C, Yang K.

J Nanosci Nanotechnol. 2018 Dec 1;18(12):8282-8288. doi: 10.1166/jnn.2018.15879.

PMID:
30189948
16.

Precision Lasso: accounting for correlations and linear dependencies in high-dimensional genomic data.

Wang H, Lengerich BJ, Aragam B, Xing EP.

Bioinformatics. 2019 Apr 1;35(7):1181-1187. doi: 10.1093/bioinformatics/bty750.

17.

Improvement in staff compliance with a safety standard checklist in endoscopy in a tertiary centre.

Mason MC, Griggs RK, Withecombe R, Xing EY, Sandberg C, Molyneux MK.

BMJ Open Qual. 2018 Aug 21;7(3):e000294. doi: 10.1136/bmjoq-2017-000294. eCollection 2018.

18.

Ensembles of Lasso Screening Rules.

Lee S, Gornitz N, Xing EP, Heckerman D, Lippert C.

IEEE Trans Pattern Anal Mach Intell. 2018 Dec;40(12):2841-2852. doi: 10.1109/TPAMI.2017.2765321. Epub 2017 Nov 24.

19.

Discovery of novel selective GPR120 agonists with potent anti-diabetic activity by hybrid design.

Sheng R, Yang L, Zhang Y, Xing E, Shi R, Wen X, Wang H, Sun H.

Bioorg Med Chem Lett. 2018 Aug 15;28(15):2599-2604. doi: 10.1016/j.bmcl.2018.06.047. Epub 2018 Jun 28.

PMID:
29980358
20.

Personalized regression enables sample-specific pan-cancer analysis.

Lengerich BJ, Aragam B, Xing EP.

Bioinformatics. 2018 Jul 1;34(13):i178-i186. doi: 10.1093/bioinformatics/bty250.

21.

Selectivity Control on Hydrogenation of Substituted Nitroarenes through End-On Adsorption of Reactants in Zeolite-Encapsulated Platinum Nanoparticles.

Chen Q, Wang M, Zhang C, Ren K, Xin Y, Zhao M, Xing E.

Chem Asian J. 2018 Apr 30. doi: 10.1002/asia.201800596. [Epub ahead of print]

PMID:
29709106
22.

Variable selection in heterogeneous datasets: A truncated-rank sparse linear mixed model with applications to genome-wide association studies.

Wang H, Aragam B, Xing EP.

Methods. 2018 Aug 1;145:2-9. doi: 10.1016/j.ymeth.2018.04.021. Epub 2018 Apr 27.

PMID:
29705212
23.

Multiplex confounding factor correction for genomic association mapping with squared sparse linear mixed model.

Wang H, Liu X, Xiao Y, Xu M, Xing EP.

Methods. 2018 Aug 1;145:33-40. doi: 10.1016/j.ymeth.2018.04.020. Epub 2018 Apr 27.

24.

miRNA‑222 promotes liver cancer cell proliferation, migration and invasion and inhibits apoptosis by targeting BBC3.

Liu Z, Sun J, Liu B, Zhao M, Xing E, Dang C.

Int J Mol Med. 2018 Jul;42(1):141-148. doi: 10.3892/ijmm.2018.3637. Epub 2018 Apr 20.

25.

Variable Selection in Heterogeneous Datasets: A Truncated-rank Sparse Linear Mixed Model with Applications to Genome-wide Association Studies.

Wang H, Aragam B, Xing EP.

Proceedings (IEEE Int Conf Bioinformatics Biomed). 2017 Nov;2017:431-438. doi: 10.1109/BIBM.2017.8217687. Epub 2017 Dec 18.

26.

Effects of 12-week supplementation of marine Omega-3 PUFA-based formulation Omega3Q10 in older adults with prehypertension and/or elevated blood cholesterol.

Shen T, Xing G, Zhu J, Zhang S, Cai Y, Li D, Xu G, Xing E, Rao J, Shi R.

Lipids Health Dis. 2017 Dec 27;16(1):253. doi: 10.1186/s12944-017-0617-0.

27.

CD4+ T Cells Orchestrate Lethal Immune Pathology despite Fungal Clearance during Cryptococcus neoformans Meningoencephalitis.

Neal LM, Xing E, Xu J, Kolbe JL, Osterholzer JJ, Segal BM, Williamson PR, Olszewski MA.

mBio. 2017 Nov 21;8(6). pii: e01415-17. doi: 10.1128/mBio.01415-17.

28.

Backward genotype-transcript-phenotype association mapping.

Lee S, Wang H, Xing EP.

Methods. 2017 Oct 1;129:18-23. doi: 10.1016/j.ymeth.2017.09.004. Epub 2017 Sep 14.

29.

The distribution of active β-glucosidase-producing microbial communities in composting.

Zang X, Liu M, Wang H, Fan Y, Zhang H, Liu J, Xing E, Xu X, Li H.

Can J Microbiol. 2017 Dec;63(12):998-1008. doi: 10.1139/cjm-2017-0368. Epub 2017 Sep 11.

PMID:
28892642
30.

Deep learning-based subdivision approach for large scale macromolecules structure recovery from electron cryo tomograms.

Xu M, Chai X, Muthakana H, Liang X, Yang G, Zeev-Ben-Mordehai T, Xing EP.

Bioinformatics. 2017 Jul 15;33(14):i13-i22. doi: 10.1093/bioinformatics/btx230.

31.

Snail Enhances Glycolysis in the Epithelial-Mesenchymal Transition Process by Targeting FBP1 in Gastric Cancer.

Yu J, Li J, Chen Y, Cao W, Lu Y, Yang J, Xing E.

Cell Physiol Biochem. 2017;43(1):31-38. doi: 10.1159/000480314. Epub 2017 Aug 24.

32.

Variance Reduction in Stochastic Gradient Langevin Dynamics.

Dubey A, Reddi SJ, Póczos B, Smola AJ, Xing EP, Williamson SA.

Adv Neural Inf Process Syst. 2016 Dec;29:1154-1162.

33.

T Cell-Restricted Notch Signaling Contributes to Pulmonary Th1 and Th2 Immunity during Cryptococcus neoformans Infection.

Neal LM, Qiu Y, Chung J, Xing E, Cho W, Malachowski AN, Sandy-Sloat AR, Osterholzer JJ, Maillard I, Olszewski MA.

J Immunol. 2017 Jul 15;199(2):643-655. doi: 10.4049/jimmunol.1601715. Epub 2017 Jun 14.

34.

Impact of postmastectomy radiation therapy in T1-2 breast cancer patients with 1-3 positive axillary lymph nodes.

Yin H, Qu Y, Wang X, Ma T, Zhang H, Zhang Y, Li Y, Zhang S, Ma H, Xing E, Liu X, Xu Q.

Oncotarget. 2017 Jul 25;8(30):49564-49573. doi: 10.18632/oncotarget.17318.

35.

Inference of multiple-wave population admixture by modeling decay of linkage disequilibrium with polynomial functions.

Zhou Y, Yuan K, Yu Y, Ni X, Xie P, Xing EP, Xu S.

Heredity (Edinb). 2017 May;118(5):503-510. doi: 10.1038/hdy.2017.5. Epub 2017 Feb 15.

36.

Semantic Pooling for Complex Event Analysis in Untrimmed Videos.

Xiaojun Chang, Yao-Liang Yu, Yi Yang, Xing EP.

IEEE Trans Pattern Anal Mach Intell. 2017 Aug;39(8):1617-1632. doi: 10.1109/TPAMI.2016.2608901. Epub 2016 Sep 13.

37.

Learning Scalable Deep Kernels with Recurrent Structure.

Al-Shedivat M, Wilson AG, Saatchi Y, Hu Z, Xing EP.

J Mach Learn Res. 2017 Jan;18(1):2850-2886.

38.

Therapeutic effect of dioscin on collagen-induced arthritis through reduction of Th1/Th2.

Guo Y, Xing E, Song H, Feng G, Liang X, An G, Zhao X, Wang M.

Int Immunopharmacol. 2016 Oct;39:79-83. doi: 10.1016/j.intimp.2016.06.029. Epub 2016 Jul 20.

PMID:
27449327
39.

U0126 attenuates ischemia/reperfusion-induced apoptosis and autophagy in myocardium through MEK/ERK/EGR-1 pathway.

Wang A, Zhang H, Liang Z, Xu K, Qiu W, Tian Y, Guo H, Jia J, Xing E, Chen R, Xiang Z, Liu J.

Eur J Pharmacol. 2016 Oct 5;788:280-285. doi: 10.1016/j.ejphar.2016.06.038. Epub 2016 Jun 23.

PMID:
27343376
40.

A network-driven approach for genome-wide association mapping.

Lee S, Kong S, Xing EP.

Bioinformatics. 2016 Jun 15;32(12):i164-i173. doi: 10.1093/bioinformatics/btw270.

41.

A time-varying group sparse additive model for genome-wide association studies of dynamic complex traits.

Marchetti-Bowick M, Yin J, Howrylak JA, Xing EP.

Bioinformatics. 2016 Oct 1;32(19):2903-10. doi: 10.1093/bioinformatics/btw347. Epub 2016 Jun 13.

42.

An Efficient Nonlinear Regression Approach for Genome-wide Detection of Marginal and Interacting Genetic Variations.

Lee S, Lozano A, Kambadur P, Xing EP.

J Comput Biol. 2016 May;23(5):372-89. doi: 10.1089/cmb.2015.0202.

43.

Low lateral divergence 2 μm InGaSb/ AlGaAsSb broad-area quantum well lasers.

Rong J, Xing E, Zhang Y, Wang L, Shu S, Tian S, Tong C, Chai X, Xu Y, Ni H, Niu Z, Wang L.

Opt Express. 2016 Apr 4;24(7):7246-52. doi: 10.1364/OE.24.007246.

PMID:
27137016
45.

Gene expression profiling of asthma phenotypes demonstrates molecular signatures of atopy and asthma control.

Howrylak JA, Moll M, Weiss ST, Raby BA, Wu W, Xing EP.

J Allergy Clin Immunol. 2016 May;137(5):1390-1397.e6. doi: 10.1016/j.jaci.2015.09.058. Epub 2016 Jan 12.

46.

Graph Estimation From Multi-Attribute Data.

Kolar M, Liu H, Xing EP.

J Mach Learn Res. 2014 May;15(May):1713-1750.

47.

Cytokine production suppression by culture supernatant of B16F10 cells and amelioration by Ganoderma lucidum polysaccharides in activated lymphocytes.

Sun LX, Li WD, Lin ZB, Duan XS, Xing EH, Jiang MM, Yang N, Qi HH, Sun Y, Li M, Niu YD, Lu J.

Cell Tissue Res. 2015 May;360(2):379-89. doi: 10.1007/s00441-014-2083-6. Epub 2015 Jan 15.

PMID:
25585987
48.

The effect of Tlr4 and/or C3 deficiency and of neonatal gene therapy on skeletal disease in mucopolysaccharidosis VII mice.

Xing EM, Wu S, Ponder KP.

Mol Genet Metab. 2015 Feb;114(2):209-16. doi: 10.1016/j.ymgme.2014.12.305. Epub 2014 Dec 19.

49.

Diffusion of lexical change in social media.

Eisenstein J, O'Connor B, Smith NA, Xing EP.

PLoS One. 2014 Nov 19;9(11):e113114. doi: 10.1371/journal.pone.0113114. eCollection 2014.

50.

Network analysis of breast cancer progression and reversal using a tree-evolving network algorithm.

Parikh AP, Curtis RE, Kuhn I, Becker-Weimann S, Bissell M, Xing EP, Wu W.

PLoS Comput Biol. 2014 Jul 24;10(7):e1003713. doi: 10.1371/journal.pcbi.1003713. eCollection 2014 Jul.

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