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Items: 19

1.

Impaired Chylomicron Assembly Modifies Hepatic Metabolism Through Bile Acid-Dependent and Transmissible Microbial Adaptations.

Xie Y, Matsumoto H, Kennedy S, Newberry EP, Moritz W, DeBosch BJ, Moley KH, Rubin DC, Warner BW, Kau AL, Tarr PI, Wylie TN, Wylie KM, Davidson NO.

Hepatology. 2019 Oct;70(4):1168-1184. doi: 10.1002/hep.30669. Epub 2019 May 23.

PMID:
31004524
2.

Genome Organization of Canada Goose Coronavirus, A Novel Species Identified in a Mass Die-off of Canada Geese.

Papineau A, Berhane Y, Wylie TN, Wylie KM, Sharpe S, Lung O.

Sci Rep. 2019 Apr 11;9(1):5954. doi: 10.1038/s41598-019-42355-y.

3.

Whole-Genome Sequencing of Klebsiella pneumoniae Isolates to Track Strain Progression in a Single Patient With Recurrent Urinary Tract Infection.

Wylie KM, Wylie TN, Minx PJ, Rosen DA.

Front Cell Infect Microbiol. 2019 Feb 8;9:14. doi: 10.3389/fcimb.2019.00014. eCollection 2019.

4.

Host Gene Expression in Nose and Blood for the Diagnosis of Viral Respiratory Infection.

Yu J, Peterson DR, Baran AM, Bhattacharya S, Wylie TN, Falsey AR, Mariani TJ, Storch GA.

J Infect Dis. 2019 Apr 1;219(7):1151-1161. doi: 10.1093/infdis/jiy608.

PMID:
30339221
5.

Carriage of the Toxic Shock Syndrome Toxin Gene by Contemporary Community-Associated Staphylococcus aureus Isolates.

Parrish KL, Wylie KM, Reich PJ, Hogan PG, Wylie TN, Kennedy CR, Lainhart W, Hunstad DA, Burnham CD, Fritz SA.

J Pediatric Infect Dis Soc. 2019 Nov 6;8(5):470-473. doi: 10.1093/jpids/piy098.

6.

Detection of Viruses in Clinical Samples by Use of Metagenomic Sequencing and Targeted Sequence Capture.

Wylie KM, Wylie TN, Buller R, Herter B, Cannella MT, Storch GA.

J Clin Microbiol. 2018 Nov 27;56(12). pii: e01123-18. doi: 10.1128/JCM.01123-18. Print 2018 Dec.

7.

Remnant Small Bowel Length in Pediatric Short Bowel Syndrome and the Correlation with Intestinal Dysbiosis and Linear Growth.

Engelstad HJ, Barron L, Moen J, Wylie TN, Wylie K, Rubin DC, Davidson N, Cade WT, Warner BB, Warner BW.

J Am Coll Surg. 2018 Oct;227(4):439-449. doi: 10.1016/j.jamcollsurg.2018.07.657. Epub 2018 Aug 2.

8.

The vaginal eukaryotic DNA virome and preterm birth.

Wylie KM, Wylie TN, Cahill AG, Macones GA, Tuuli MG, Stout MJ.

Am J Obstet Gynecol. 2018 Aug;219(2):189.e1-189.e12. doi: 10.1016/j.ajog.2018.04.048. Epub 2018 May 5.

9.

Carriage of Cronobacter sakazakii in the Very Preterm Infant Gut.

Chandrasekaran S, Burnham CD, Warner BB, Tarr PI, Wylie TN.

Clin Infect Dis. 2018 Jul 2;67(2):269-274. doi: 10.1093/cid/ciy062.

10.

Genome Sequence of Enterovirus D68 from St. Louis, Missouri, USA, 2016.

Wylie KM, Wylie TN, Storch GA.

Genome Announc. 2017 Mar 2;5(9). pii: e01630-16. doi: 10.1128/genomeA.01630-16.

11.

High-throughput sequencing of cerebrospinal fluid for diagnosis of chronic Propionibacterium acnes meningitis in an allogeneic stem cell transplant recipient.

Wylie KM, Blanco-Guzman M, Wylie TN, Lawrence SJ, Ghobadi A, DiPersio JF, Storch GA.

Transpl Infect Dis. 2016 Apr;18(2):227-33. doi: 10.1111/tid.12512. Epub 2016 Mar 31.

PMID:
26895706
12.

The transcriptional profile of coronary arteritis in Kawasaki disease.

Rowley AH, Wylie KM, Kim KY, Pink AJ, Yang A, Reindel R, Baker SC, Shulman ST, Orenstein JM, Lingen MW, Weinstock GM, Wylie TN.

BMC Genomics. 2015 Dec 18;16:1076. doi: 10.1186/s12864-015-2323-5.

13.

Enhanced virome sequencing using targeted sequence capture.

Wylie TN, Wylie KM, Herter BN, Storch GA.

Genome Res. 2015 Dec;25(12):1910-20. doi: 10.1101/gr.191049.115. Epub 2015 Sep 22.

14.

Genome Modeling System: A Knowledge Management Platform for Genomics.

Griffith M, Griffith OL, Smith SM, Ramu A, Callaway MB, Brummett AM, Kiwala MJ, Coffman AC, Regier AA, Oberkfell BJ, Sanderson GE, Mooney TP, Nutter NG, Belter EA, Du F, Long RL, Abbott TE, Ferguson IT, Morton DL, Burnett MM, Weible JV, Peck JB, Dukes A, McMichael JF, Lolofie JT, Derickson BR, Hundal J, Skidmore ZL, Ainscough BJ, Dees ND, Schierding WS, Kandoth C, Kim KH, Lu C, Harris CC, Maher N, Maher CA, Magrini VJ, Abbott BS, Chen K, Clark E, Das I, Fan X, Hawkins AE, Hepler TG, Wylie TN, Leonard SM, Schroeder WE, Shi X, Carmichael LK, Weil MR, Wohlstadter RW, Stiehr G, McLellan MD, Pohl CS, Miller CA, Koboldt DC, Walker JR, Eldred JM, Larson DE, Dooling DJ, Ding L, Mardis ER, Wilson RK.

PLoS Comput Biol. 2015 Jul 9;11(7):e1004274. doi: 10.1371/journal.pcbi.1004274. eCollection 2015 Jul.

15.

Development and Evaluation of an Enterovirus D68 Real-Time Reverse Transcriptase PCR Assay.

Wylie TN, Wylie KM, Buller RS, Cannella M, Storch GA.

J Clin Microbiol. 2015 Aug;53(8):2641-7. doi: 10.1128/JCM.00923-15. Epub 2015 Jun 10.

16.

Enterovirus D68-associated acute respiratory distress syndrome in adult, United States, 2014.

Farrell JJ, Ikladios O, Wylie KM, O'Rourke LM, Lowery KS, Cromwell JS, Wylie TN, Melendez EL, Makhoul Y, Sampath R, Bonomo RA, Storch GA.

Emerg Infect Dis. 2015 May;21(5):914-6. doi: 10.3201/eid2105.142033. No abstract available.

17.

Genome sequence of enterovirus D68 from St. Louis, Missouri, USA.

Wylie KM, Wylie TN, Orvedahl A, Buller RS, Herter BN, Magrini V, Wilson RK, Storch GA.

Emerg Infect Dis. 2015 Jan;21(1):184-6. doi: 10.3201/eid2101.141605. No abstract available.

18.

Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections.

Carl MA, Ndao IM, Springman AC, Manning SD, Johnson JR, Johnston BD, Burnham CA, Weinstock ES, Weinstock GM, Wylie TN, Mitreva M, Abubucker S, Zhou Y, Stevens HJ, Hall-Moore C, Julian S, Shaikh N, Warner BB, Tarr PI.

Clin Infect Dis. 2014 May;58(9):1211-8. doi: 10.1093/cid/ciu084. Epub 2014 Mar 18.

19.

The origin and evolution of mutations in acute myeloid leukemia.

Welch JS, Ley TJ, Link DC, Miller CA, Larson DE, Koboldt DC, Wartman LD, Lamprecht TL, Liu F, Xia J, Kandoth C, Fulton RS, McLellan MD, Dooling DJ, Wallis JW, Chen K, Harris CC, Schmidt HK, Kalicki-Veizer JM, Lu C, Zhang Q, Lin L, O'Laughlin MD, McMichael JF, Delehaunty KD, Fulton LA, Magrini VJ, McGrath SD, Demeter RT, Vickery TL, Hundal J, Cook LL, Swift GW, Reed JP, Alldredge PA, Wylie TN, Walker JR, Watson MA, Heath SE, Shannon WD, Varghese N, Nagarajan R, Payton JE, Baty JD, Kulkarni S, Klco JM, Tomasson MH, Westervelt P, Walter MJ, Graubert TA, DiPersio JF, Ding L, Mardis ER, Wilson RK.

Cell. 2012 Jul 20;150(2):264-78. doi: 10.1016/j.cell.2012.06.023.

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