Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 34

1.

BED-domain-containing immune receptors confer diverse resistance spectra to yellow rust.

Marchal C, Zhang J, Zhang P, Fenwick P, Steuernagel B, Adamski NM, Boyd L, McIntosh R, Wulff BBH, Berry S, Lagudah E, Uauy C.

Nat Plants. 2018 Sep;4(9):662-668. doi: 10.1038/s41477-018-0236-4. Epub 2018 Aug 27.

PMID:
30150615
2.

Shifting the limits in wheat research and breeding using a fully annotated reference genome.

International Wheat Genome Sequencing Consortium (IWGSC); IWGSC RefSeq principal investigators:, Appels R, Eversole K, Feuillet C, Keller B, Rogers J, Stein N; IWGSC whole-genome assembly principal investigators:, Pozniak CJ, Stein N, Choulet F, Distelfeld A, Eversole K, Poland J, Rogers J, Ronen G, Sharpe AG; Whole-genome sequencing and assembly:, Pozniak C, Ronen G, Stein N, Barad O, Baruch K, Choulet F, Keeble-Gagnère G, Mascher M, Sharpe AG, Ben-Zvi G, Josselin AA; Hi-C data-based scaffolding:, Stein N, Mascher M, Himmelbach A; Whole-genome assembly quality control and analyses:, Choulet F, Keeble-Gagnère G, Mascher M, Rogers J, Balfourier F, Gutierrez-Gonzalez J, Hayden M, Josselin AA, Koh C, Muehlbauer G, Pasam RK, Paux E, Pozniak CJ, Rigault P, Sharpe AG, Tibbits J, Tiwari V; Pseudomolecule assembly:, Choulet F, Keeble-Gagnère G, Mascher M, Josselin AA, Rogers J; RefSeq genome structure and gene analyses:, Spannagl M, Choulet F, Lang D, Gundlach H, Haberer G, Keeble-Gagnère G, Mayer KFX, Ormanbekova D, Paux E, Prade V, Šimková H, Wicker T; Automated annotation:, Choulet F, Spannagl M, Swarbreck D, Rimbert H, Felder M, Guilhot N, Gundlach H, Haberer G, Kaithakottil G, Keilwagen J, Lang D, Leroy P, Lux T, Mayer KFX, Twardziok S, Venturini L; Manual gene curation:, Appels R, Rimbert H, Choulet F, Juhász A, Keeble-Gagnère G; Subgenome comparative analyses:, Choulet F, Spannagl M, Lang D, Abrouk M, Haberer G, Keeble-Gagnère G, Mayer KFX, Wicker T; Transposable elements:, Choulet F, Wicker T, Gundlach H, Lang D, Spannagl M; Phylogenomic analyses:, Lang D, Spannagl M, Appels R, Fischer I; Transcriptome analyses and RNA-seq data:, Uauy C, Borrill P, Ramirez-Gonzalez RH, Appels R, Arnaud D, Chalabi S, Chalhoub B, Choulet F, Cory A, Datla R, Davey MW, Hayden M, Jacobs J, Lang D, Robinson SJ, Spannagl M, Steuernagel B, Tibbits J, Tiwari V, van Ex F, Wulff BBH; Whole-genome methylome:, Pozniak CJ, Robinson SJ, Sharpe AG, Cory A; Histone mark analyses:, Benhamed M, Paux E, Bendahmane A, Concia L, Latrasse D; BAC chromosome MTP IWGSC–Bayer Whole-Genome Profiling (WGP) tags:, Rogers J, Jacobs J, Alaux M, Appels R, Bartoš J, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, Letellier T, Olsen OA, Šimková H, Singh K, Valárik M, van der Vossen E, Vautrin S, Weining S; Chromosome LTC mapping and physical mapping quality control:, Korol A, Frenkel Z, Fahima T, Glikson V, Raats D, Rogers J; RH mapping:, Tiwari V, Gill B, Paux E, Poland J; Optical mapping:, Doležel J, Číhalíková J, Šimková H, Toegelová H, Vrána J; Recombination analyses:, Sourdille P, Darrier B; Gene family analyses:, Appels R, Spannagl M, Lang D, Fischer I, Ormanbekova D, Prade V; CBF gene family:, Barabaschi D, Cattivelli L; Dehydrin gene family:, Hernandez P, Galvez S, Budak H; NLR gene family:, Steuernagel B, Jones JDG, Witek K, Wulff BBH, Yu G; PPR gene family:, Small I, Melonek J, Zhou R; Prolamin gene family:, Juhász A, Belova T, Appels R, Olsen OA; WAK gene family:, Kanyuka K, King R; Stem solidness (SSt1) QTL team:, Nilsen K, Walkowiak S, Pozniak CJ, Cuthbert R, Datla R, Knox R, Wiebe K, Xiang D; Flowering locus C (FLC) gene team:, Rohde A, Golds T; Genome size analysis:, Doležel J, Čížková J, Tibbits J; MicroRNA and tRNA annotation:, Budak H, Akpinar BA, Biyiklioglu S; Genetic maps and mapping:, Muehlbauer G, Poland J, Gao L, Gutierrez-Gonzalez J, N'Daiye A; BAC libraries and chromosome sorting:, Doležel J, Šimková H, Číhalíková J, Kubaláková M, Šafář J, Vrána J; BAC pooling, BAC library repository, and access:, Berges H, Bellec A, Vautrin S; IWGSC sequence and data repository and access:, Alaux M, Alfama F, Adam-Blondon AF, Flores R, Guerche C, Letellier T, Loaec M, Quesneville H; Physical maps and BAC-based sequences:; 1A BAC sequencing and assembly:, Pozniak CJ, Sharpe AG, Walkowiak S, Budak H, Condie J, Ens J, Koh C, Maclachlan R, Tan Y, Wicker T; 1B BAC sequencing and assembly:, Choulet F, Paux E, Alberti A, Aury JM, Balfourier F, Barbe V, Couloux A, Cruaud C, Labadie K, Mangenot S, Wincker P; 1D, 4D, and 6D physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 2AL physical mapping:, Singh K, Chhuneja P, Gupta OP, Jindal S, Kaur P, Malik P, Sharma P, Yadav B; 2AS physical mapping:, Singh NK, Khurana J, Chaudhary C, Khurana P, Kumar V, Mahato A, Mathur S, Sevanthi A, Sharma N, Tomar RS; 2B, 2D, 4B, 5BL, and 5DL IWGSC–Bayer Whole-Genome Profiling (WGP) physical maps:, Rogers J, Jacobs J, Alaux M, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, van der Vossen E, Vautrin S; 3AL physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 3DS physical mapping and BAC sequencing and assembly:, Bartoš J, Holušová K, Plíhal O; 3DL BAC sequencing and assembly:, Clark MD, Heavens D, Kettleborough G, Wright J; 4A physical mapping, BAC sequencing, assembly, and annotation:, Valárik M, Abrouk M, Balcárková B, Holušová K, Hu Y, Luo M; 5BS BAC sequencing and assembly:, Salina E, Ravin N, Skryabin K, Beletsky A, Kadnikov V, Mardanov A, Nesterov M, Rakitin A, Sergeeva E; 6B BAC sequencing and assembly:, Handa H, Kanamori H, Katagiri S, Kobayashi F, Nasuda S, Tanaka T, Wu J; 7A physical mapping and BAC sequencing:, Appels R, Hayden M, Keeble-Gagnère G, Rigault P, Tibbits J; 7B physical mapping, BAC sequencing, and assembly:, Olsen OA, Belova T, Cattonaro F, Jiumeng M, Kugler K, Mayer KFX, Pfeifer M, Sandve S, Xun X, Zhan B; 7DS BAC sequencing and assembly:, Šimková H, Abrouk M, Batley J, Bayer PE, Edwards D, Hayashi S, Toegelová H, Tulpová Z, Visendi P; 7DL physical mapping and BAC sequencing:, Weining S, Cui L, Du X, Feng K, Nie X, Tong W, Wang L; Figures:, Borrill P, Gundlach H, Galvez S, Kaithakottil G, Lang D, Lux T, Mascher M, Ormanbekova D, Prade V, Ramirez-Gonzalez RH, Spannagl M, Stein N, Uauy C, Venturini L; Manuscript writing team:, Stein N, Appels R, Eversole K, Rogers J, Borrill P, Cattivelli L, Choulet F, Hernandez P, Kanyuka K, Lang D, Mascher M, Nilsen K, Paux E, Pozniak CJ, Ramirez-Gonzalez RH, Šimková H, Small I, Spannagl M, Swarbreck D, Uauy C.

Science. 2018 Aug 17;361(6403). pii: eaar7191. doi: 10.1126/science.aar7191. Epub 2018 Aug 16.

PMID:
30115783
3.

The transcriptional landscape of polyploid wheat.

Ramírez-González RH, Borrill P, Lang D, Harrington SA, Brinton J, Venturini L, Davey M, Jacobs J, van Ex F, Pasha A, Khedikar Y, Robinson SJ, Cory AT, Florio T, Concia L, Juery C, Schoonbeek H, Steuernagel B, Xiang D, Ridout CJ, Chalhoub B, Mayer KFX, Benhamed M, Latrasse D, Bendahmane A; International Wheat Genome Sequencing Consortium, Wulff BBH, Appels R, Tiwari V, Datla R, Choulet F, Pozniak CJ, Provart NJ, Sharpe AG, Paux E, Spannagl M, Bräutigam A, Uauy C.

Science. 2018 Aug 17;361(6403). pii: eaar6089. doi: 10.1126/science.aar6089.

PMID:
30115782
4.

Chromosome-scale comparative sequence analysis unravels molecular mechanisms of genome dynamics between two wheat cultivars.

Thind AK, Wicker T, Müller T, Ackermann PM, Steuernagel B, Wulff BBH, Spannagl M, Twardziok SO, Felder M, Lux T, Mayer KFX; International Wheat Genome Sequencing Consortium, Keller B, Krattinger SG.

Genome Biol. 2018 Aug 17;19(1):104. doi: 10.1186/s13059-018-1477-2.

5.

Wheat-the cereal abandoned by GM.

Wulff BBH, Dhugga KS.

Science. 2018 Aug 3;361(6401):451-452. doi: 10.1126/science.aat5119. No abstract available.

PMID:
30072526
6.

Speed breeding is a powerful tool to accelerate crop research and breeding.

Watson A, Ghosh S, Williams MJ, Cuddy WS, Simmonds J, Rey MD, Asyraf Md Hatta M, Hinchliffe A, Steed A, Reynolds D, Adamski NM, Breakspear A, Korolev A, Rayner T, Dixon LE, Riaz A, Martin W, Ryan M, Edwards D, Batley J, Raman H, Carter J, Rogers C, Domoney C, Moore G, Harwood W, Nicholson P, Dieters MJ, DeLacy IH, Zhou J, Uauy C, Boden SA, Park RF, Wulff BBH, Hickey LT.

Nat Plants. 2018 Jan;4(1):23-29. doi: 10.1038/s41477-017-0083-8. Epub 2018 Jan 1.

PMID:
29292376
7.

Combining Traditional Mutagenesis with New High-Throughput Sequencing and Genome Editing to Reveal Hidden Variation in Polyploid Wheat.

Uauy C, Wulff BBH, Dubcovsky J.

Annu Rev Genet. 2017 Nov 27;51:435-454. doi: 10.1146/annurev-genet-120116-024533. Epub 2017 Sep 20. Review.

PMID:
28934591
8.

Rapid Gene Isolation Using MutChromSeq.

Steuernagel B, Vrána J, Karafiátová M, Wulff BBH, Doležel J.

Methods Mol Biol. 2017;1659:231-243. doi: 10.1007/978-1-4939-7249-4_20.

PMID:
28856655
9.

MutRenSeq: A Method for Rapid Cloning of Plant Disease Resistance Genes.

Steuernagel B, Witek K, Jones JDG, Wulff BBH.

Methods Mol Biol. 2017;1659:215-229. doi: 10.1007/978-1-4939-7249-4_19.

PMID:
28856654
10.

Isolation of Wheat Genomic DNA for Gene Mapping and Cloning.

Yu G, Hatta A, Periyannan S, Lagudah E, Wulff BBH.

Methods Mol Biol. 2017;1659:207-213. doi: 10.1007/978-1-4939-7249-4_18.

PMID:
28856653
11.

Generation of Loss-of-Function Mutants for Wheat Rust Disease Resistance Gene Cloning.

Mago R, Till B, Periyannan S, Yu G, Wulff BBH, Lagudah E.

Methods Mol Biol. 2017;1659:199-205. doi: 10.1007/978-1-4939-7249-4_17.

PMID:
28856652
12.

Genomic innovation for crop improvement.

Bevan MW, Uauy C, Wulff BB, Zhou J, Krasileva K, Clark MD.

Nature. 2017 Mar 15;543(7645):346-354. doi: 10.1038/nature22011. Review.

PMID:
28300107
13.

Discovery and characterization of two new stem rust resistance genes in Aegilops sharonensis.

Yu G, Champouret N, Steuernagel B, Olivera PD, Simmons J, Williams C, Johnson R, Moscou MJ, Hernández-Pinzón I, Green P, Sela H, Millet E, Jones JDG, Ward ER, Steffenson BJ, Wulff BBH.

Theor Appl Genet. 2017 Jun;130(6):1207-1222. doi: 10.1007/s00122-017-2882-8. Epub 2017 Mar 8.

14.

Rapid gene isolation in barley and wheat by mutant chromosome sequencing.

Sánchez-Martín J, Steuernagel B, Ghosh S, Herren G, Hurni S, Adamski N, Vrána J, Kubaláková M, Krattinger SG, Wicker T, Doležel J, Keller B, Wulff BB.

Genome Biol. 2016 Oct 31;17(1):221.

15.

A pigeonpea gene confers resistance to Asian soybean rust in soybean.

Kawashima CG, Guimarães GA, Nogueira SR, MacLean D, Cook DR, Steuernagel B, Baek J, Bouyioukos C, Melo Bdo V, Tristão G, de Oliveira JC, Rauscher G, Mittal S, Panichelli L, Bacot K, Johnson E, Iyer G, Tabor G, Wulff BB, Ward E, Rairdan GJ, Broglie KE, Wu G, van Esse HP, Jones JD, Brommonschenkel SH.

Nat Biotechnol. 2016 Jun;34(6):661-5. doi: 10.1038/nbt.3554. Epub 2016 Apr 25.

PMID:
27111723
16.

Rapid cloning of disease-resistance genes in plants using mutagenesis and sequence capture.

Steuernagel B, Periyannan SK, Hernández-Pinzón I, Witek K, Rouse MN, Yu G, Hatta A, Ayliffe M, Bariana H, Jones JD, Lagudah ES, Wulff BB.

Nat Biotechnol. 2016 Jun;34(6):652-5. doi: 10.1038/nbt.3543. Epub 2016 Apr 25.

PMID:
27111722
17.

Chloroplast phylogeny of Triticum/Aegilops species is not incongruent with an ancient homoploid hybrid origin of the ancestor of the bread wheat D-genome.

Sandve SR, Marcussen T, Mayer K, Jakobsen KS, Heier L, Steuernagel B, Wulff BB, Olsen OA.

New Phytol. 2015 Oct;208(1):9-10. doi: 10.1111/nph.13487. Epub 2015 May 21. No abstract available.

18.

NLR-parser: rapid annotation of plant NLR complements.

Steuernagel B, Jupe F, Witek K, Jones JD, Wulff BB.

Bioinformatics. 2015 May 15;31(10):1665-7. doi: 10.1093/bioinformatics/btv005. Epub 2015 Jan 12.

19.

Strategies for transferring resistance into wheat: from wide crosses to GM cassettes.

Wulff BB, Moscou MJ.

Front Plant Sci. 2014 Dec 4;5:692. doi: 10.3389/fpls.2014.00692. eCollection 2014.

20.

Ancient hybridizations among the ancestral genomes of bread wheat.

Marcussen T, Sandve SR, Heier L, Spannagl M, Pfeifer M; International Wheat Genome Sequencing Consortium,, Jakobsen KS, Wulff BB, Steuernagel B, Mayer KF, Olsen OA.

Science. 2014 Jul 18;345(6194):1250092. doi: 10.1126/science.1250092.

21.

Characterisation and analysis of the Aegilops sharonensis transcriptome, a wild relative of wheat in the Sitopsis section.

Bouyioukos C, Moscou MJ, Champouret N, Hernández-Pinzón I, Ward ER, Wulff BB.

PLoS One. 2013 Aug 8;8(8):e72782. doi: 10.1371/journal.pone.0072782. eCollection 2013.

22.

An allele of Arabidopsis COI1 with hypo- and hypermorphic phenotypes in plant growth, defence and fertility.

Dobón A, Wulff BB, Canet JV, Fort P, Tornero P.

PLoS One. 2013;8(1):e55115. doi: 10.1371/journal.pone.0055115. Epub 2013 Jan 30.

23.

Improving immunity in crops: new tactics in an old game.

Wulff BB, Horvath DM, Ward ER.

Curr Opin Plant Biol. 2011 Aug;14(4):468-76. doi: 10.1016/j.pbi.2011.04.002. Epub 2011 Apr 29. Review.

PMID:
21531167
24.

The major specificity-determining amino acids of the tomato Cf-9 disease resistance protein are at hypervariable solvent-exposed positions in the central leucine-rich repeats.

Wulff BB, Heese A, Tomlinson-Buhot L, Jones DA, de la Peña M, Jones JD.

Mol Plant Microbe Interact. 2009 Oct;22(10):1203-13. doi: 10.1094/MPMI-22-10-1203.

25.

Recognitional specificity and evolution in the tomato-Cladosporium fulvum pathosystem.

Wulff BB, Chakrabarti A, Jones DA.

Mol Plant Microbe Interact. 2009 Oct;22(10):1191-202. doi: 10.1094/MPMI-22-10-1191. Review.

26.

Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes.

Reinders J, Wulff BB, Mirouze M, Marí-Ordóñez A, Dapp M, Rozhon W, Bucher E, Theiler G, Paszkowski J.

Genes Dev. 2009 Apr 15;23(8):939-50. doi: 10.1101/gad.524609.

27.

Structure-function analysis of cf-9, a receptor-like protein with extracytoplasmic leucine-rich repeats.

van der Hoorn RA, Wulff BB, Rivas S, Durrant MC, van der Ploeg A, de Wit PJ, Jones JD.

Plant Cell. 2005 Mar;17(3):1000-15. Epub 2005 Feb 18.

28.
29.

Genetic variation at the tomato Cf-4/Cf-9 locus induced by EMS mutagenesis and intralocus recombination.

Wulff BB, Thomas CM, Parniske M, Jones JD.

Genetics. 2004 May;167(1):459-70.

30.
32.

Homologues of the Cf-9 disease resistance gene (Hcr9s) are present at multiple loci on the short arm of tomato chromosome 1.

Parniske M, Wulff BB, Bonnema G, Thomas CM, Jones DA, Jones JD.

Mol Plant Microbe Interact. 1999 Feb;12(2):93-102.

33.

Exopolysaccharide II production is regulated by salt in the halotolerant strain Rhizobium meliloti EFB1.

Lloret J, Wulff BB, Rubio JM, Downie JA, Bonilla I, Rivilla R.

Appl Environ Microbiol. 1998 Mar;64(3):1024-8.

34.

Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato.

Parniske M, Hammond-Kosack KE, Golstein C, Thomas CM, Jones DA, Harrison K, Wulff BB, Jones JD.

Cell. 1997 Dec 12;91(6):821-32.

Supplemental Content

Loading ...
Support Center