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Items: 1 to 50 of 202

1.

The Structure and Function of the Human Small Intestinal Microbiota: Current Understanding and Future Directions.

Kastl AJ Jr, Terry NA, Albenberg LG, Wu GD.

Cell Mol Gastroenterol Hepatol. 2019 Jul 22. pii: S2352-345X(19)30094-3. doi: 10.1016/j.jcmgh.2019.07.006. [Epub ahead of print] Review.

2.

Host mitochondria influence gut microbiome diversity: A role for ROS.

Yardeni T, Tanes CE, Bittinger K, Mattei LM, Schaefer PM, Singh LN, Wu GD, Murdock DG, Wallace DC.

Sci Signal. 2019 Jul 2;12(588). pii: eaaw3159. doi: 10.1126/scisignal.aaw3159.

PMID:
31266851
3.

Role for diet in normal gut barrier function: developing guidance within the framework of food-labeling regulations.

Camilleri M, Lyle BJ, Madsen KL, Sonnenburg J, Verbeke K, Wu GD.

Am J Physiol Gastrointest Liver Physiol. 2019 Jul 1;317(1):G17-G39. doi: 10.1152/ajpgi.00063.2019. Epub 2019 May 24.

4.

Challenges in IBD Research: Environmental Triggers.

Ho SM, Lewis JD, Mayer EA, Plevy SE, Chuang E, Rappaport SM, Croitoru K, Korzenik JR, Krischer J, Hyams JS, Judson R, Kellis M, Jerrett M, Miller GW, Grant ML, Shtraizent N, Honig G, Hurtado-Lorenzo A, Wu GD.

Inflamm Bowel Dis. 2019 May 16;25(Supplement_2):S13-S23. doi: 10.1093/ibd/izz076.

PMID:
31095702
5.

Posttranscriptional regulation of colonic epithelial repair by RNA binding protein IMP1/IGF2BP1.

Chatterji P, Williams PA, Whelan KA, Samper FC, Andres SF, Simon LA, Parham LR, Mizuno R, Lundsmith ET, Lee DS, Liang S, Wijeratne HS, Marti S, Chau L, Giroux V, Wilkins BJ, Wu GD, Shah P, Tartaglia GG, Hamilton KE.

EMBO Rep. 2019 Jun;20(6). pii: e47074. doi: 10.15252/embr.201847074. Epub 2019 May 6.

PMID:
31061170
6.

Effects of Digeda-4 Decoction on the CYP450 Activities in Rats Using a Cocktail Method by HPLC.

Zhang D, Wu GD, Zhang YD, Xu JP, Zhen HT, Li MH.

Biomed Res Int. 2018 Oct 23;2018:1415082. doi: 10.1155/2018/1415082. eCollection 2018.

7.

Body Mass Index Is a Better Indicator of Body Composition than Weight-for-Length at Age 1 Month.

Roy SM, Fields DA, Mitchell JA, Hawkes CP, Kelly A, Wu GD, DeRusso PA, Elovitz MA, Ford E, Drigo D, Zemel BS, McCormack SE.

J Pediatr. 2019 Jan;204:77-83.e1. doi: 10.1016/j.jpeds.2018.08.007. Epub 2018 Sep 26.

PMID:
30268397
8.

Islet transplantation attenuates cardiac fibrosis in diabetic rats through inhibition of TGF-β1/Smad3 pathway.

Wang HW, Chen YH, Chen YY, Huang W, Zhu XD, Ni FB, Wu GD, Xu ZQ, Huang ZQ, Chen BC, Xiao FY.

Am J Transl Res. 2018 Aug 15;10(8):2445-2456. eCollection 2018.

9.

FXR-Dependent Modulation of the Human Small Intestinal Microbiome by the Bile Acid Derivative Obeticholic Acid.

Friedman ES, Li Y, Shen TD, Jiang J, Chau L, Adorini L, Babakhani F, Edwards J, Shapiro D, Zhao C, Carr RM, Bittinger K, Li H, Wu GD.

Gastroenterology. 2018 Dec;155(6):1741-1752.e5. doi: 10.1053/j.gastro.2018.08.022. Epub 2018 Aug 23.

PMID:
30144429
10.

Considerations for best practices in studies of fiber or other dietary components and the intestinal microbiome.

Klurfeld DM, Davis CD, Karp RW, Allen-Vercoe E, Chang EB, Chassaing B, Fahey GC Jr, Hamaker BR, Holscher HD, Lampe JW, Marette A, Martens E, O'Keefe SJ, Rose DJ, Saarela M, Schneeman BO, Slavin JL, Sonnenburg JL, Swanson KS, Wu GD, Lynch CJ.

Am J Physiol Endocrinol Metab. 2018 Dec 1;315(6):E1087-E1097. doi: 10.1152/ajpendo.00058.2018. Epub 2018 Aug 21.

PMID:
30130151
11.

Establishing a mucosal gut microbial community in vitro using an artificial simulator.

Liu L, Firrman J, Tanes C, Bittinger K, Thomas-Gahring A, Wu GD, Van den Abbeele P, Tomasula PM.

PLoS One. 2018 Jul 17;13(7):e0197692. doi: 10.1371/journal.pone.0197692. eCollection 2018.

12.

[Enhanced Nitrogen Removal of ANAMMOX Treating Saline Wastewater With Betaine Addition].

Yu DS, Wu GD, Li J, Zhou T, Wang XJ.

Huan Jing Ke Xue. 2018 Apr 8;39(4):1688-1696. doi: 10.13227/j.hjkx.201706023. Chinese.

PMID:
29964994
13.

[Effect of pH Shock on Nitrogen Removal Performance of Marine Anaerobic Ammonium-Oxidizing Bacteria Treating Saline Wastewater].

Yu DS, Zhou T, Li J, Wang XX, Wu GD, Wang XJ.

Huan Jing Ke Xue. 2017 Aug 8;38(8):3369-3376. doi: 10.13227/j.hjkx.201702023. Chinese.

PMID:
29964946
14.

[Nitrogen Removal Performance of ANAMMOX Process with K+ Addition in Saline Surroundings].

Wu GD, Yu DS, Li J, Zhou T, Wang XJ.

Huan Jing Ke Xue. 2017 Jul 8;38(7):2917-2924. doi: 10.13227/j.hjkx.201612259. Chinese.

PMID:
29964633
15.

[Substrate Inhibition and Kinetic Characteristics of Marine Anaerobic Ammonium Oxidizing Bacteria Treating Saline Wastewater].

Zhou T, Yu DS, Li J, Wu GD, Wang XJ.

Huan Jing Ke Xue. 2017 Dec 8;38(12):5162-5168. doi: 10.13227/j.hjkx.201705233. Chinese.

PMID:
29964577
16.

Evaluation of a therapy for Idiopathic Chronic Enterocolitis in rhesus macaques (Macaca mulatta) and linked microbial community correlates.

Taylor JM, Clarke EL, Baker K, Lauder A, Kim D, Bailey A, Wu GD, Collman RG, Doyle-Meyers L, Russell-Lodrigue K, Blanchard J, Bushman FD, Bohm R.

PeerJ. 2018 Apr 11;6:e4612. doi: 10.7717/peerj.4612. eCollection 2018.

17.

Microbes vs. chemistry in the origin of the anaerobic gut lumen.

Friedman ES, Bittinger K, Esipova TV, Hou L, Chau L, Jiang J, Mesaros C, Lund PJ, Liang X, FitzGerald GA, Goulian M, Lee D, Garcia BA, Blair IA, Vinogradov SA, Wu GD.

Proc Natl Acad Sci U S A. 2018 Apr 17;115(16):4170-4175. doi: 10.1073/pnas.1718635115. Epub 2018 Apr 2.

18.

Functional imaging of the interaction between gut microbiota and the human host: A proof-of-concept clinical study evaluating novel use for 18F-FDG PET-CT.

Boursi B, Werner TJ, Gholami S, Houshmand S, Mamtani R, Lewis JD, Wu GD, Alavi A, Yang YX.

PLoS One. 2018 Feb 15;13(2):e0192747. doi: 10.1371/journal.pone.0192747. eCollection 2018.

19.

Publisher Correction: Enterotypes in the landscape of gut microbial community composition.

Costea PI, Hildebrand F, Arumugam M, Bäckhed F, Blaser MJ, Bushman FD, de Vos WM, Ehrlich SD, Fraser CM, Hattori M, Huttenhower C, Jeffery IB, Knights D, Lewis JD, Ley RE, Ochman H, O'Toole PW, Quince C, Relman DA, Shanahan F, Sunagawa S, Wang J, Weinstock GM, Wu GD, Zeller G, Zhao L, Raes J, Knight R, Bork P.

Nat Microbiol. 2018 Mar;3(3):388. doi: 10.1038/s41564-018-0114-x.

PMID:
29440750
20.

Gut Microbiota Offers Universal Biomarkers across Ethnicity in Inflammatory Bowel Disease Diagnosis and Infliximab Response Prediction.

Zhou Y, Xu ZZ, He Y, Yang Y, Liu L, Lin Q, Nie Y, Li M, Zhi F, Liu S, Amir A, González A, Tripathi A, Chen M, Wu GD, Knight R, Zhou H, Chen Y.

mSystems. 2018 Jan 30;3(1). pii: e00188-17. doi: 10.1128/mSystems.00188-17. eCollection 2018 Jan-Feb.

21.

Enterotypes in the landscape of gut microbial community composition.

Costea PI, Hildebrand F, Arumugam M, Bäckhed F, Blaser MJ, Bushman FD, de Vos WM, Ehrlich SD, Fraser CM, Hattori M, Huttenhower C, Jeffery IB, Knights D, Lewis JD, Ley RE, Ochman H, O'Toole PW, Quince C, Relman DA, Shanahan F, Sunagawa S, Wang J, Weinstock GM, Wu GD, Zeller G, Zhao L, Raes J, Knight R, Bork P.

Nat Microbiol. 2018 Jan;3(1):8-16. doi: 10.1038/s41564-017-0072-8. Epub 2017 Dec 18. Review. Erratum in: Nat Microbiol. 2018 Feb 13;:.

22.

A role for bacterial urease in gut dysbiosis and Crohn's disease.

Ni J, Shen TD, Chen EZ, Bittinger K, Bailey A, Roggiani M, Sirota-Madi A, Friedman ES, Chau L, Lin A, Nissim I, Scott J, Lauder A, Hoffmann C, Rivas G, Albenberg L, Baldassano RN, Braun J, Xavier RJ, Clish CB, Yudkoff M, Li H, Goulian M, Bushman FD, Lewis JD, Wu GD.

Sci Transl Med. 2017 Nov 15;9(416). pii: eaah6888. doi: 10.1126/scitranslmed.aah6888.

23.

AAA IBD 2017: Methodologies to Collect and Analyze Clinical Data to Support Quality Improvement Initiatives Designed to Optimize the Care of Patients With IBD.

Waljee AK, Yang Y, Wu GD.

Gastroenterology. 2017 Dec;153(6):e1-e5. doi: 10.1053/j.gastro.2017.10.020. Epub 2017 Oct 26. No abstract available.

PMID:
29107020
24.

Layer-by-Layer Assembled Conductive Metal-Organic Framework Nanofilms for Room-Temperature Chemiresistive Sensing.

Yao MS, Lv XJ, Fu ZH, Li WH, Deng WH, Wu GD, Xu G.

Angew Chem Int Ed Engl. 2017 Dec 22;56(52):16510-16514. doi: 10.1002/anie.201709558. Epub 2017 Nov 15.

PMID:
29071780
25.

Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn's Disease.

Lewis JD, Chen EZ, Baldassano RN, Otley AR, Griffiths AM, Lee D, Bittinger K, Bailey A, Friedman ES, Hoffmann C, Albenberg L, Sinha R, Compher C, Gilroy E, Nessel L, Grant A, Chehoud C, Li H, Wu GD, Bushman FD.

Cell Host Microbe. 2017 Aug 9;22(2):247. doi: 10.1016/j.chom.2017.07.011. No abstract available.

26.

Gut microbiota and IBD: causation or correlation?

Ni J, Wu GD, Albenberg L, Tomov VT.

Nat Rev Gastroenterol Hepatol. 2017 Oct;14(10):573-584. doi: 10.1038/nrgastro.2017.88. Epub 2017 Jul 19. Review.

27.

A Comprehensive Study on the Internet of Underwater Things: Applications, Challenges, and Channel Models.

Kao CC, Lin YS, Wu GD, Huang CJ.

Sensors (Basel). 2017 Jun 22;17(7). pii: E1477. doi: 10.3390/s17071477.

28.

[Effect of Temperature on Nitrogen Removal Performance of Marine Anaerobic Ammonium Oxidizing Bacteria].

Zhou T, Yu DS, Li J, Wu GD, Wang XJ.

Huan Jing Ke Xue. 2017 May 8;38(5):2044-2051. doi: 10.13227/j.hjkx.201610055. Chinese.

PMID:
29965112
29.

Presentation of the Julius M. Friedenwald Medal to Anil K. Rustgi.

Falk GW, Ginsberg GG, Katzka DA, Carr RM, Hamilton KE, Wu GD.

Gastroenterology. 2017 Jun;152(8):2063-2067. doi: 10.1053/j.gastro.2017.04.039. Epub 2017 Apr 30. No abstract available.

PMID:
28465174
30.

Long non-coding RNA MEG3 induces cell apoptosis in esophageal cancer through endoplasmic reticulum stress.

Huang ZL, Chen RP, Zhou XT, Zhan HL, Hu MM, Liu B, Wu GD, Wu LF.

Oncol Rep. 2017 May;37(5):3093-3099. doi: 10.3892/or.2017.5568. Epub 2017 Apr 11.

PMID:
28405686
31.

The AGA's Fecal Microbiota Transplantation National Registry: An Important Step Toward Understanding Risks and Benefits of Microbiota Therapeutics.

Kelly CR, Kim AM, Laine L, Wu GD.

Gastroenterology. 2017 Mar;152(4):681-684. doi: 10.1053/j.gastro.2017.01.028. Epub 2017 Jan 29. No abstract available.

PMID:
28143773
32.

Influence of the microbiota on host physiology - moving beyond the gut.

Barrett KE, Wu GD.

J Physiol. 2017 Jan 15;595(2):433-435. doi: 10.1113/JP273451. No abstract available.

33.

East Meets West: The Increasing Incidence of Inflammatory Bowel Disease in Asia as a Paradigm for Environmental Effects on the Pathogenesis of Immune-Mediated Disease.

Yang Y, Owyang C, Wu GD.

Gastroenterology. 2016 Dec;151(6):e1-e5. doi: 10.1053/j.gastro.2016.10.034. Epub 2016 Nov 1. No abstract available.

34.

Roles for Intestinal Bacteria, Viruses, and Fungi in Pathogenesis of Inflammatory Bowel Diseases and Therapeutic Approaches.

Sartor RB, Wu GD.

Gastroenterology. 2017 Feb;152(2):327-339.e4. doi: 10.1053/j.gastro.2016.10.012. Epub 2016 Oct 18. Review.

35.

Dietary Regulation of the Gut Microbiota Engineered by a Minimal Defined Bacterial Consortium.

Shen TC, Chehoud C, Ni J, Hsu E, Chen YY, Bailey A, Laughlin A, Bittinger K, Bushman FD, Wu GD.

PLoS One. 2016 May 13;11(5):e0155620. doi: 10.1371/journal.pone.0155620. eCollection 2016.

36.

The Gut Microbiome, Its Metabolome, and Their Relationship to Health and Disease.

Wu GD.

Nestle Nutr Inst Workshop Ser. 2016;84:103-10. doi: 10.1159/000436993. Epub 2016 Jan 14.

PMID:
26764479
37.

Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn's Disease.

Lewis JD, Chen EZ, Baldassano RN, Otley AR, Griffiths AM, Lee D, Bittinger K, Bailey A, Friedman ES, Hoffmann C, Albenberg L, Sinha R, Compher C, Gilroy E, Nessel L, Grant A, Chehoud C, Li H, Wu GD, Bushman FD.

Cell Host Microbe. 2015 Oct 14;18(4):489-500. doi: 10.1016/j.chom.2015.09.008. Erratum in: Cell Host Microbe. 2017 Aug 9;22(2):247.

38.

Alterations of the Subgingival Microbiota in Pediatric Crohn's Disease Studied Longitudinally in Discovery and Validation Cohorts.

Kelsen J, Bittinger K, Pauly-Hubbard H, Posivak L, Grunberg S, Baldassano R, Lewis JD, Wu GD, Bushman FD.

Inflamm Bowel Dis. 2015 Dec;21(12):2797-805. doi: 10.1097/MIB.0000000000000557.

39.

Engineering the gut microbiota to treat hyperammonemia.

Shen TC, Albenberg L, Bittinger K, Chehoud C, Chen YY, Judge CA, Chau L, Ni J, Sheng M, Lin A, Wilkins BJ, Buza EL, Lewis JD, Daikhin Y, Nissim I, Yudkoff M, Bushman FD, Wu GD.

J Clin Invest. 2015 Jul 1;125(7):2841-50. doi: 10.1172/JCI79214. Epub 2015 Jun 22.

40.

[Protection, exploitation and utilization states of specialized Mongolian folk medicine resources and related development strategy].

Zhang CH, Man D, Wu GD, Li ZH, Zhao DD, Liu Y, Li MH.

Zhongguo Zhong Yao Za Zhi. 2015 Mar;40(5):771-7. Chinese.

PMID:
26087532
41.

Fungal Signature in the Gut Microbiota of Pediatric Patients With Inflammatory Bowel Disease.

Chehoud C, Albenberg LG, Judge C, Hoffmann C, Grunberg S, Bittinger K, Baldassano RN, Lewis JD, Bushman FD, Wu GD.

Inflamm Bowel Dis. 2015 Aug;21(8):1948-56. doi: 10.1097/MIB.0000000000000454.

42.

Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9.

Bryson AL, Hwang Y, Sherrill-Mix S, Wu GD, Lewis JD, Black L, Clark TA, Bushman FD.

MBio. 2015 Jun 16;6(3):e00648. doi: 10.1128/mBio.00648-15.

43.

Comparative Effectiveness of Nutritional and Biological Therapy in North American Children with Active Crohn's Disease.

Lee D, Baldassano RN, Otley AR, Albenberg L, Griffiths AM, Compher C, Chen EZ, Li H, Gilroy E, Nessel L, Grant A, Chehoud C, Bushman FD, Wu GD, Lewis JD.

Inflamm Bowel Dis. 2015 Aug;21(8):1786-93. doi: 10.1097/MIB.0000000000000426.

PMID:
25970545
44.

Diet in the pathogenesis and treatment of inflammatory bowel diseases.

Lee D, Albenberg L, Compher C, Baldassano R, Piccoli D, Lewis JD, Wu GD.

Gastroenterology. 2015 May;148(6):1087-106. doi: 10.1053/j.gastro.2015.01.007. Epub 2015 Jan 15. Review.

45.

Comparative metabolomics in vegans and omnivores reveal constraints on diet-dependent gut microbiota metabolite production.

Wu GD, Compher C, Chen EZ, Smith SA, Shah RD, Bittinger K, Chehoud C, Albenberg LG, Nessel L, Gilroy E, Star J, Weljie AM, Flint HJ, Metz DC, Bennett MJ, Li H, Bushman FD, Lewis JD.

Gut. 2016 Jan;65(1):63-72. doi: 10.1136/gutjnl-2014-308209. Epub 2014 Nov 26.

46.

Improved characterization of medically relevant fungi in the human respiratory tract using next-generation sequencing.

Bittinger K, Charlson ES, Loy E, Shirley DJ, Haas AR, Laughlin A, Yi Y, Wu GD, Lewis JD, Frank I, Cantu E, Diamond JM, Christie JD, Collman RG, Bushman FD.

Genome Biol. 2014;15(10):487.

47.

IL-6 gene promoter polymorphisms and risk of coronary artery disease in a Chinese population.

Sun GQ, Wu GD, Meng Y, Du B, Li YB.

Genet Mol Res. 2014 Sep 26;13(3):7718-24. doi: 10.4238/2014.September.26.9.

48.

Nutrition, gut microbiota and immunity: therapeutic targets for IBD. Concluding remarks.

Lewis JD, Ruemmele FM, Wu GD.

Nestle Nutr Inst Workshop Ser. 2014;79:161-2. doi: 10.1159/000360721. Epub 2014 Sep 5. No abstract available.

PMID:
25227304
49.

Diet, the gut microbiome and the metabolome in IBD.

Wu GD.

Nestle Nutr Inst Workshop Ser. 2014;79:73-82. doi: 10.1159/000360686. Epub 2014 Sep 5. Review.

PMID:
25227296
50.

Correlation between intraluminal oxygen gradient and radial partitioning of intestinal microbiota.

Albenberg L, Esipova TV, Judge CP, Bittinger K, Chen J, Laughlin A, Grunberg S, Baldassano RN, Lewis JD, Li H, Thom SR, Bushman FD, Vinogradov SA, Wu GD.

Gastroenterology. 2014 Nov;147(5):1055-63.e8. doi: 10.1053/j.gastro.2014.07.020. Epub 2014 Jul 18.

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