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Items: 1 to 50 of 71

1.

Selection, Succession, and Stabilization of Soil Microbial Consortia.

Zegeye EK, Brislawn CJ, Farris Y, Fansler SJ, Hofmockel KS, Jansson JK, Wright AT, Graham EB, Naylor D, McClure RS, Bernstein HC.

mSystems. 2019 May 14;4(4). pii: e00055-19. doi: 10.1128/mSystems.00055-19.

2.

Selection, Succession, and Stabilization of Soil Microbial Consortia.

Zegeye EK, Brislawn CJ, Farris Y, Fansler SJ, Hofmockel KS, Jansson JK, Wright AT, Graham EB, Naylor D, McClure RS, Bernstein HC.

mSystems. 2019 May 14;4(4). pii: e00055-19. doi: 10.1128/mSystems.00055-19. eCollection 2019 Jul-Aug.

3.

Proximity-dependent proteomics of the Chlamydia trachomatis inclusion membrane reveals functional interactions with endoplasmic reticulum exit sites.

Dickinson MS, Anderson LN, Webb-Robertson BM, Hansen JR, Smith RD, Wright AT, Hybiske K.

PLoS Pathog. 2019 Apr 3;15(4):e1007698. doi: 10.1371/journal.ppat.1007698. eCollection 2019 Apr.

4.

Benzo[ a]pyrene Induction of Glutathione S-Transferases: An Activity-Based Protein Profiling Investigation.

Stoddard EG, Killinger BJ, Nag SA, Martin J, Corley R, Smith JN, Wright AT.

Chem Res Toxicol. 2019 Jun 17;32(6):1259-1267. doi: 10.1021/acs.chemrestox.9b00069. Epub 2019 Apr 12.

PMID:
30938511
5.

A continuous fluorescence assay for simple quantification of bile salt hydrolase activity in the gut microbiome.

Brandvold KR, Weaver JM, Whidbey C, Wright AT.

Sci Rep. 2019 Feb 4;9(1):1359. doi: 10.1038/s41598-018-37656-7.

6.

Gut commensals make choline too.

Wright AT.

Nat Microbiol. 2019 Jan;4(1):4-5. doi: 10.1038/s41564-018-0325-1. No abstract available.

7.

A Probe-Enabled Approach for the Selective Isolation and Characterization of Functionally Active Subpopulations in the Gut Microbiome.

Whidbey C, Sadler NC, Nair RN, Volk RF, DeLeon AJ, Bramer LM, Fansler SJ, Hansen JR, Shukla AK, Jansson JK, Thrall BD, Wright AT.

J Am Chem Soc. 2019 Jan 9;141(1):42-47. doi: 10.1021/jacs.8b09668. Epub 2018 Dec 17.

8.

Activity-Based Protein Profiling-Enabling Multimodal Functional Studies of Microbial Communities.

Whidbey C, Wright AT.

Curr Top Microbiol Immunol. 2019;420:1-21. doi: 10.1007/82_2018_128. Review.

9.

Application of multiplexed ion mobility spectrometry towards the identification of host protein signatures of treatment effect in pulmonary tuberculosis.

Kedia K, Wendler JP, Baker ES, Burnum-Johnson KE, Jarsberg LG, Stratton KG, Wright AT, Piehowski PD, Gritsenko MA, Lewinsohn DM, Sigal GB, Weiner MH, Smith RD, Jacobs JM, Nahid P.

Tuberculosis (Edinb). 2018 Sep;112:52-61. doi: 10.1016/j.tube.2018.07.005. Epub 2018 Jul 18.

10.

A Cobalamin Activity-Based Probe Enables Microbial Cell Growth and Finds New Cobalamin-Protein Interactions across Domains.

Rosnow JJ, Hwang S, Killinger BJ, Kim YM, Moore RJ, Lindemann SR, Maupin-Furlow JA, Wright AT.

Appl Environ Microbiol. 2018 Aug 31;84(18). pii: e00955-18. doi: 10.1128/AEM.00955-18. Print 2018 Sep 15.

11.

Multifunctional Activity-Based Protein Profiling of the Developing Lung.

Stoddard EG, Volk RF, Carson JP, Ljungberg CM, Murphree TA, Smith JN, Sadler NC, Shukla AK, Ansong C, Wright AT.

J Proteome Res. 2018 Aug 3;17(8):2623-2634. doi: 10.1021/acs.jproteome.8b00086. Epub 2018 Jul 18.

12.

High-Fat Diets Alter the Modulatory Effects of Xenobiotics on Cytochrome P450 Activities.

Sadler NC, Webb-Robertson BM, Clauss TR, Pounds JG, Corley R, Wright AT.

Chem Res Toxicol. 2018 May 21;31(5):308-318. doi: 10.1021/acs.chemrestox.8b00008. Epub 2018 May 4.

PMID:
29688711
13.

Plasma Protein Turnover Rates in Rats Using Stable Isotope Labeling, Global Proteomics, and Activity-Based Protein Profiling.

Smith JN, Tyrrell KJ, Hansen JR, Thomas DG, Murphree TA, Shukla A, Luders T, Madden JM, Li Y, Wright AT, Piehowski PD.

Anal Chem. 2017 Dec 19;89(24):13559-13566. doi: 10.1021/acs.analchem.7b03984. Epub 2017 Dec 6.

PMID:
29164873
14.

A Global Survey of ATPase Activity in Plasmodium falciparum Asexual Blood Stages and Gametocytes.

Ortega C, Frando A, Webb-Robertson BJ, Anderson LN, Fleck N, Flannery EL, Fishbaugher M, Murphree TA, Hansen JR, Smith RD, Kappe SHI, Wright AT, Grundner C.

Mol Cell Proteomics. 2018 Jan;17(1):111-120. doi: 10.1074/mcp.RA117.000088. Epub 2017 Oct 27.

15.

Activity-Based Probes for Isoenzyme- and Site-Specific Functional Characterization of Glutathione S-Transferases.

Stoddard EG, Killinger BJ, Nair RN, Sadler NC, Volk RF, Purvine SO, Shukla AK, Smith JN, Wright AT.

J Am Chem Soc. 2017 Nov 15;139(45):16032-16035. doi: 10.1021/jacs.7b07378. Epub 2017 Nov 1.

16.

De novo synthesis of alkyne substituted tryptophans as chemical probes for protein profiling studies.

Nair RN, Rosnow JJ, Murphree TA, Bowden ME, Lindemann SR, Wright AT.

Org Chem Front. 2017 Apr 1;4(4):495-499. doi: 10.1039/C6QO00819D. Epub 2016 Dec 26.

17.

A parts list for fungal cellulosomes revealed by comparative genomics.

Haitjema CH, Gilmore SP, Henske JK, Solomon KV, de Groot R, Kuo A, Mondo SJ, Salamov AA, LaButti K, Zhao Z, Chiniquy J, Barry K, Brewer HM, Purvine SO, Wright AT, Hainaut M, Boxma B, van Alen T, Hackstein JHP, Henrissat B, Baker SE, Grigoriev IV, O'Malley MA.

Nat Microbiol. 2017 May 30;2:17087. doi: 10.1038/nmicrobiol.2017.87.

PMID:
28555641
18.

Elucidation of roles for vitamin B12 in regulation of folate, ubiquinone, and methionine metabolism.

Romine MF, Rodionov DA, Maezato Y, Anderson LN, Nandhikonda P, Rodionova IA, Carre A, Li X, Xu C, Clauss TR, Kim YM, Metz TO, Wright AT.

Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):E1205-E1214. doi: 10.1073/pnas.1612360114. Epub 2017 Jan 30.

19.

Dinitrogenase-Driven Photobiological Hydrogen Production Combats Oxidative Stress in Cyanothece sp. Strain ATCC 51142.

Sadler NC, Bernstein HC, Melnicki MR, Charania MA, Hill EA, Anderson LN, Monroe ME, Smith RD, Beliaev AS, Wright AT.

Appl Environ Microbiol. 2016 Nov 21;82(24):7227-7235. Print 2016 Dec 15.

20.

Profiling microbial lignocellulose degradation and utilization by emergent omics technologies.

Rosnow JJ, Anderson LN, Nair RN, Baker ES, Wright AT.

Crit Rev Biotechnol. 2017 Aug;37(5):626-640. doi: 10.1080/07388551.2016.1209158. Epub 2016 Jul 20. Review.

PMID:
27439855
21.

Desmosomal junctions are necessary for adult sinus node function.

Mezzano V, Liang Y, Wright AT, Lyon RC, Pfeiffer E, Song MY, Gu Y, Dalton ND, Scheinman M, Peterson KL, Evans SM, Fowler S, Cerrone M, McCulloch AD, Sheikh F.

Cardiovasc Res. 2016 Aug 1;111(3):274-86. doi: 10.1093/cvr/cvw083. Epub 2016 Apr 20.

22.

Hepatic Cytochrome P450 Activity, Abundance, and Expression Throughout Human Development.

Sadler NC, Nandhikonda P, Webb-Robertson BJ, Ansong C, Anderson LN, Smith JN, Corley RA, Wright AT.

Drug Metab Dispos. 2016 Jul;44(7):984-91. doi: 10.1124/dmd.115.068593. Epub 2016 Apr 15.

23.

Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes.

Solomon KV, Haitjema CH, Henske JK, Gilmore SP, Borges-Rivera D, Lipzen A, Brewer HM, Purvine SO, Wright AT, Theodorou MK, Grigoriev IV, Regev A, Thompson DA, O'Malley MA.

Science. 2016 Mar 11;351(6278):1192-5. doi: 10.1126/science.aad1431. Epub 2016 Feb 18.

24.

Host-pathogen interactions: A cholera surveillance system.

Wright AT.

Nat Chem Biol. 2016 Apr;12(4):203-4. doi: 10.1038/nchembio.2039. Epub 2016 Feb 22. No abstract available.

PMID:
26900864
25.

Systematic Survey of Serine Hydrolase Activity in Mycobacterium tuberculosis Defines Changes Associated with Persistence.

Ortega C, Anderson LN, Frando A, Sadler NC, Brown RW, Smith RD, Wright AT, Grundner C.

Cell Chem Biol. 2016 Feb 18;23(2):290-298. doi: 10.1016/j.chembiol.2016.01.003. Epub 2016 Feb 4.

26.

Activity-Based Protein Profiling of Ammonia Monooxygenase in Nitrosomonas europaea.

Bennett K, Sadler NC, Wright AT, Yeager C, Hyman MR.

Appl Environ Microbiol. 2016 Apr 4;82(8):2270-2279. doi: 10.1128/AEM.03556-15. Print 2016 Apr.

27.

Tools for the Microbiome: Nano and Beyond.

Biteen JS, Blainey PC, Cardon ZG, Chun M, Church GM, Dorrestein PC, Fraser SE, Gilbert JA, Jansson JK, Knight R, Miller JF, Ozcan A, Prather KA, Quake SR, Ruby EG, Silver PA, Taha S, van den Engh G, Weiss PS, Wong GC, Wright AT, Young TD.

ACS Nano. 2016 Jan 26;10(1):6-37. doi: 10.1021/acsnano.5b07826. Epub 2015 Dec 22. Review.

PMID:
26695070
28.

Live Cell Discovery of Microbial Vitamin Transport and Enzyme-Cofactor Interactions.

Anderson LN, Koech PK, Plymale AE, Landorf EV, Konopka A, Collart FR, Lipton MS, Romine MF, Wright AT.

ACS Chem Biol. 2016 Feb 19;11(2):345-54. doi: 10.1021/acschembio.5b00918. Epub 2015 Dec 22.

PMID:
26669591
29.

Role of Cytochrome P450 Hydroxylase in the Decreased Accumulation of Vitamin E in Muscle from Turkeys Compared to that from Chickens.

Perez DM, Richards MP, Parker RS, Berres ME, Wright AT, Sifri M, Sadler NC, Tatiyaborworntham N, Li N.

J Agric Food Chem. 2016 Jan 27;64(3):671-80. doi: 10.1021/acs.jafc.5b05433. Epub 2016 Jan 12.

30.

Multi-Omic Dynamics Associate Oxygenic Photosynthesis with Nitrogenase-Mediated H2 Production in Cyanothece sp. ATCC 51142.

Bernstein HC, Charania MA, McClure RS, Sadler NC, Melnicki MR, Hill EA, Markillie LM, Nicora CD, Wright AT, Romine MF, Beliaev AS.

Sci Rep. 2015 Nov 3;5:16004. doi: 10.1038/srep16004.

31.

Advancing understanding of microbial bioenergy conversion processes by activity-based protein profiling.

Liu Y, Fredrickson JK, Sadler NC, Nandhikonda P, Smith RD, Wright AT.

Biotechnol Biofuels. 2015 Sep 25;8:156. doi: 10.1186/s13068-015-0343-7. eCollection 2015. Review.

32.

Intramyocardial injection of hydrogel with high interstitial spread does not impact action potential propagation.

Suarez SL, Rane AA, Muñoz A, Wright AT, Zhang SX, Braden RL, Almutairi A, McCulloch AD, Christman KL.

Acta Biomater. 2015 Oct;26:13-22. doi: 10.1016/j.actbio.2015.08.004. Epub 2015 Aug 8.

33.

Activity-based protein profiling of microbes.

Sadler NC, Wright AT.

Curr Opin Chem Biol. 2015 Feb;24:139-44. doi: 10.1016/j.cbpa.2014.10.022. Epub 2014 Dec 19. Review.

PMID:
25531039
34.

Caveolae in ventricular myocytes are required for stretch-dependent conduction slowing.

Pfeiffer ER, Wright AT, Edwards AG, Stowe JC, McNall K, Tan J, Niesman I, Patel HH, Roth DM, Omens JH, McCulloch AD.

J Mol Cell Cardiol. 2014 Nov;76:265-74. doi: 10.1016/j.yjmcc.2014.09.014. Epub 2014 Sep 26.

35.

The use of sequential pattern mining to predict next prescribed medications.

Wright AP, Wright AT, McCoy AB, Sittig DF.

J Biomed Inform. 2015 Feb;53:73-80. doi: 10.1016/j.jbi.2014.09.003. Epub 2014 Sep 16.

36.

Gene co-expression network analysis in Rhodobacter capsulatus and application to comparative expression analysis of Rhodobacter sphaeroides.

Peña-Castillo L, Mercer RG, Gurinovich A, Callister SJ, Wright AT, Westbye AB, Beatty JT, Lang AS.

BMC Genomics. 2014 Aug 28;15:730. doi: 10.1186/1471-2164-15-730.

37.

Characterization of protein redox dynamics induced during light-to-dark transitions and nutrient limitation in cyanobacteria.

Ansong C, Sadler NC, Hill EA, Lewis MP, Zink EM, Smith RD, Beliaev AS, Konopka AE, Wright AT.

Front Microbiol. 2014 Jul 3;5:325. doi: 10.3389/fmicb.2014.00325. eCollection 2014.

38.

Cutaneous afferent regulation of motor function.

Panek I, Bui T, Wright AT, Brownstone RM.

Acta Neurobiol Exp (Wars). 2014;74(2):158-71. Review.

39.

Organelle-specific activity-based protein profiling in living cells.

Wiedner SD, Anderson LN, Sadler NC, Chrisler WB, Kodali VK, Smith RD, Wright AT.

Angew Chem Int Ed Engl. 2014 Mar 10;53(11):2919-22. doi: 10.1002/anie.201309135. Epub 2014 Feb 6.

40.

Mycobacterium tuberculosis Ser/Thr protein kinase B mediates an oxygen-dependent replication switch.

Ortega C, Liao R, Anderson LN, Rustad T, Ollodart AR, Wright AT, Sherman DR, Grundner C.

PLoS Biol. 2014 Jan;12(1):e1001746. doi: 10.1371/journal.pbio.1001746. Epub 2014 Jan 7.

41.

Deficient expression of aldehyde dehydrogenase 1A1 is consistent with increased sensitivity of Gorlin syndrome patients to radiation carcinogenesis.

Wright AT, Magnaldo T, Sontag RL, Anderson LN, Sadler NC, Piehowski PD, Gache Y, Weber TJ.

Mol Carcinog. 2015 Jun;54(6):473-84. doi: 10.1002/mc.22115. Epub 2013 Nov 27.

42.

Pyrethroid activity-based probes for profiling cytochrome P450 activities associated with insecticide interactions.

Ismail HM, O'Neill PM, Hong DW, Finn RD, Henderson CJ, Wright AT, Cravatt BF, Hemingway J, Paine MJ.

Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19766-71. doi: 10.1073/pnas.1320185110. Epub 2013 Nov 18.

43.

Live cell chemical profiling of temporal redox dynamics in a photoautotrophic cyanobacterium.

Sadler NC, Melnicki MR, Serres MH, Merkley ED, Chrisler WB, Hill EA, Romine MF, Kim S, Zink EM, Datta S, Smith RD, Beliaev AS, Konopka A, Wright AT.

ACS Chem Biol. 2014 Jan 17;9(1):291-300. doi: 10.1021/cb400769v. Epub 2013 Nov 6.

PMID:
24168666
44.

Activity-based protein profiling of secreted cellulolytic enzyme activity dynamics in Trichoderma reesei QM6a, NG14, and RUT-C30.

Anderson LN, Culley DE, Hofstad BA, Chauvigné-Hines LM, Zink EM, Purvine SO, Smith RD, Callister SJ, Magnuson JM, Wright AT.

Mol Biosyst. 2013 Dec;9(12):2992-3000. doi: 10.1039/c3mb70333a. Epub 2013 Oct 14.

45.

Connexin defects underlie arrhythmogenic right ventricular cardiomyopathy in a novel mouse model.

Lyon RC, Mezzano V, Wright AT, Pfeiffer E, Chuang J, Banares K, Castaneda A, Ouyang K, Cui L, Contu R, Gu Y, Evans SM, Omens JH, Peterson KL, McCulloch AD, Sheikh F.

Hum Mol Genet. 2014 Mar 1;23(5):1134-50. doi: 10.1093/hmg/ddt508. Epub 2013 Oct 9.

46.

Impact of pregnancy on the pharmacokinetics of dibenzo[def,p]chrysene in mice.

Crowell SR, Sharma AK, Amin S, Soelberg JJ, Sadler NC, Wright AT, Baird WM, Williams DE, Corley RA.

Toxicol Sci. 2013 Sep;135(1):48-62. doi: 10.1093/toxsci/kft124. Epub 2013 Jun 6.

47.

Disparate proteome responses of pathogenic and nonpathogenic aspergilli to human serum measured by activity-based protein profiling (ABPP).

Wiedner SD, Ansong C, Webb-Robertson BJ, Pederson LM, Fortuin S, Hofstad BA, Shukla AK, Panisko EA, Smith RD, Wright AT.

Mol Cell Proteomics. 2013 Jul;12(7):1791-805. doi: 10.1074/mcp.M112.026534. Epub 2013 Apr 18.

48.

Adenylyl cyclase 6 deletion increases mortality during sustained β-adrenergic receptor stimulation.

Tang T, Lai NC, Wright AT, Gao MH, Lee P, Guo T, Tang R, McCulloch AD, Hammond HK.

J Mol Cell Cardiol. 2013 Jul;60:60-7. doi: 10.1016/j.yjmcc.2013.04.005. Epub 2013 Apr 12.

49.

Identification of widespread adenosine nucleotide binding in Mycobacterium tuberculosis.

Ansong C, Ortega C, Payne SH, Haft DH, Chauvignè-Hines LM, Lewis MP, Ollodart AR, Purvine SO, Shukla AK, Fortuin S, Smith RD, Adkins JN, Grundner C, Wright AT.

Chem Biol. 2013 Jan 24;20(1):123-33. doi: 10.1016/j.chembiol.2012.11.008.

50.

Suite of activity-based probes for cellulose-degrading enzymes.

Chauvigné-Hines LM, Anderson LN, Weaver HM, Brown JN, Koech PK, Nicora CD, Hofstad BA, Smith RD, Wilkins MJ, Callister SJ, Wright AT.

J Am Chem Soc. 2012 Dec 19;134(50):20521-32. doi: 10.1021/ja309790w. Epub 2012 Dec 6.

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