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Items: 1 to 50 of 152

1.

Controlled sampling of ribosomally active protistan diversity in sediment-surface layers identifies putative players in the marine carbon sink.

Rodríguez-Martínez R, Leonard G, Milner DS, Sudek S, Conway M, Moore K, Hudson T, Mahé F, Keeling PJ, Santoro AE, Worden AZ, Richards TA.

ISME J. 2020 Jan 9. doi: 10.1038/s41396-019-0581-y. [Epub ahead of print]

PMID:
31919469
2.

Correction to: Common ancestry of heterodimerizing TALE homeobox transcription factors across Metazoa and Archaeplastida.

Joo S, Wang MH, Lui G, Lee J, Barnas A, Kim E, Sudek S, Worden AZ, Lee JH.

BMC Biol. 2020 Jan 9;18(1):4. doi: 10.1186/s12915-020-0737-2.

3.

Unexpected mitochondrial genome diversity revealed by targeted single-cell genomics of heterotrophic flagellated protists.

Wideman JG, Monier A, Rodríguez-Martínez R, Leonard G, Cook E, Poirier C, Maguire F, Milner DS, Irwin NAT, Moore K, Santoro AE, Keeling PJ, Worden AZ, Richards TA.

Nat Microbiol. 2020 Jan;5(1):154-165. doi: 10.1038/s41564-019-0605-4. Epub 2019 Nov 25.

PMID:
31768028
4.

Assessing the Diversity and Distribution of Apicomplexans in Host and Free-Living Environments Using High-Throughput Amplicon Data and a Phylogenetically Informed Reference Framework.

Del Campo J, Heger TJ, Rodríguez-Martínez R, Worden AZ, Richards TA, Massana R, Keeling PJ.

Front Microbiol. 2019 Oct 23;10:2373. doi: 10.3389/fmicb.2019.02373. eCollection 2019.

5.

Metabolic and biogeochemical consequences of viral infection in aquatic ecosystems.

Zimmerman AE, Howard-Varona C, Needham DM, John SG, Worden AZ, Sullivan MB, Waldbauer JR, Coleman ML.

Nat Rev Microbiol. 2020 Jan;18(1):21-34. doi: 10.1038/s41579-019-0270-x. Epub 2019 Nov 5. Review.

PMID:
31690825
6.

Factors Affecting Healing in the Treatment of Hidradenitis Suppurativa.

Worden A, Yoho DJ, Houin H, Moquin K, Hamzavi I, Saab I, Siddiqui A.

Ann Plast Surg. 2019 Oct 29. doi: 10.1097/SAP.0000000000002105. [Epub ahead of print]

PMID:
31688123
7.

The need to account for cell biology in characterizing predatory mixotrophs in aquatic environments.

Wilken S, Yung CCM, Hamilton M, Hoadley K, Nzongo J, Eckmann C, Corrochano-Luque M, Poirier C, Worden AZ.

Philos Trans R Soc Lond B Biol Sci. 2019 Nov 25;374(1786):20190090. doi: 10.1098/rstb.2019.0090. Epub 2019 Oct 7.

PMID:
31587652
8.

Targeted metagenomic recovery of four divergent viruses reveals shared and distinctive characteristics of giant viruses of marine eukaryotes.

Needham DM, Poirier C, Hehenberger E, Jiménez V, Swalwell JE, Santoro AE, Worden AZ.

Philos Trans R Soc Lond B Biol Sci. 2019 Nov 25;374(1786):20190086. doi: 10.1098/rstb.2019.0086. Epub 2019 Oct 7.

9.

Surgical Wound Misclassification to Clean From Clean-Contaminated in Common Abdominal Operations.

Stefanou A, Worden A, Kandagatla P, Reickert C, Rubinfeld I.

J Surg Res. 2020 Feb;246:131-138. doi: 10.1016/j.jss.2019.09.001. Epub 2019 Sep 30.

PMID:
31580983
10.

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators.

Needham DM, Yoshizawa S, Hosaka T, Poirier C, Choi CJ, Hehenberger E, Irwin NAT, Wilken S, Yung CM, Bachy C, Kurihara R, Nakajima Y, Kojima K, Kimura-Someya T, Leonard G, Malmstrom RR, Mende DR, Olson DK, Sudo Y, Sudek S, Richards TA, DeLong EF, Keeling PJ, Santoro AE, Shirouzu M, Iwasaki W, Worden AZ.

Proc Natl Acad Sci U S A. 2019 Oct 8;116(41):20574-20583. doi: 10.1073/pnas.1907517116. Epub 2019 Sep 23.

11.

Contrasting Mixotrophic Lifestyles Reveal Different Ecological Niches in Two Closely Related Marine Protists.

Wilken S, Choi CJ, Worden AZ.

J Phycol. 2020 Feb;56(1):52-67. doi: 10.1111/jpy.12920. Epub 2019 Nov 1.

PMID:
31529498
12.

Multispecific anti-HIV duoCAR-T cells display broad in vitro antiviral activity and potent in vivo elimination of HIV-infected cells in a humanized mouse model.

Anthony-Gonda K, Bardhi A, Ray A, Flerin N, Li M, Chen W, Ochsenbauer C, Kappes JC, Krueger W, Worden A, Schneider D, Zhu Z, Orentas R, Dimitrov DS, Goldstein H, Dropulić B.

Sci Transl Med. 2019 Aug 7;11(504). pii: eaav5685. doi: 10.1126/scitranslmed.aav5685.

PMID:
31391322
13.

Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection.

Kolody BC, McCrow JP, Allen LZ, Aylward FO, Fontanez KM, Moustafa A, Moniruzzaman M, Chavez FP, Scholin CA, Allen EE, Worden AZ, Delong EF, Allen AE.

ISME J. 2019 Nov;13(11):2817-2833. doi: 10.1038/s41396-019-0472-2. Epub 2019 Jul 18.

14.

Closely related viruses of the marine picoeukaryotic alga Ostreococcus lucimarinus exhibit different ecological strategies.

Zimmerman AE, Bachy C, Ma X, Roux S, Jang HB, Sullivan MB, Waldbauer JR, Worden AZ.

Environ Microbiol. 2019 Jun;21(6):2148-2170. doi: 10.1111/1462-2920.14608. Epub 2019 May 13.

15.

Phylogeny, Evidence for a Cryptic Plastid, and Distribution of Chytriodinium Parasites (Dinophyceae) Infecting Copepods.

Strassert JFH, Hehenberger E, Del Campo J, Okamoto N, Kolisko M, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

J Eukaryot Microbiol. 2019 Jul;66(4):574-581. doi: 10.1111/jeu.12701. Epub 2018 Dec 11.

PMID:
30444565
16.

Common ancestry of heterodimerizing TALE homeobox transcription factors across Metazoa and Archaeplastida.

Joo S, Wang MH, Lui G, Lee J, Barnas A, Kim E, Sudek S, Worden AZ, Lee JH.

BMC Biol. 2018 Nov 5;16(1):136. doi: 10.1186/s12915-018-0605-5. Erratum in: BMC Biol. 2020 Jan 9;18(1):4.

17.

Measuring the patient experience in community mental health services for older people: A study of the Net Promoter Score using the Friends and Family Test in England.

Wilberforce M, Poll S, Langham H, Worden A, Challis D.

Int J Geriatr Psychiatry. 2019 Jan;34(1):31-37. doi: 10.1002/gps.4978. Epub 2018 Sep 24.

PMID:
30247775
18.

A Revised Taxonomy of Diplonemids Including the Eupelagonemidae n. fam. and a Type Species, Eupelagonema oceanica n. gen. & sp.

Okamoto N, Gawryluk RMR, Del Campo J, Strassert JFH, Lukeš J, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

J Eukaryot Microbiol. 2019 May;66(3):519-524. doi: 10.1111/jeu.12679. Epub 2018 Aug 29.

PMID:
30080299
19.

Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation.

Guo J, Wilken S, Jimenez V, Choi CJ, Ansong C, Dannebaum R, Sudek L, Milner DS, Bachy C, Reistetter EN, Elrod VA, Klimov D, Purvine SO, Wei CL, Kunde-Ramamoorthy G, Richards TA, Goodenough U, Smith RD, Callister SJ, Worden AZ.

Nat Microbiol. 2018 Jul;3(7):781-790. doi: 10.1038/s41564-018-0178-7. Epub 2018 Jun 25.

PMID:
29946165
20.

Transcriptional responses of the marine green alga Micromonas pusilla and an infecting prasinovirus under different phosphate conditions.

Bachy C, Charlesworth CJ, Chan AM, Finke JF, Wong CH, Wei CL, Sudek S, Coleman ML, Suttle CA, Worden AZ.

Environ Microbiol. 2018 Aug;20(8):2898-2912. doi: 10.1111/1462-2920.14273. Epub 2018 Sep 9.

PMID:
29749714
21.

RNase If -treated quantitative PCR for dsRNA quantitation of RNAi trait in genetically modified crops.

Wang PH, Schulenberg G, Whitlock S, Worden A, Zhou N, Novak S, Chen W.

BMC Biotechnol. 2018 Jan 17;18(1):3. doi: 10.1186/s12896-018-0413-6.

22.

Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing.

Orsi WD, Wilken S, Del Campo J, Heger T, James E, Richards TA, Keeling PJ, Worden AZ, Santoro AE.

Environ Microbiol. 2018 Feb;20(2):815-827. doi: 10.1111/1462-2920.14018. Epub 2018 Jan 2.

PMID:
29215213
23.

Age, memory loss and perceptions of dementia in South Asian ethnic minorities.

Giebel CM, Worden A, Challis D, Jolley D, Bhui KS, Lambat A, Kampanellou E, Purandare N.

Aging Ment Health. 2019 Feb;23(2):173-182. doi: 10.1080/13607863.2017.1408772. Epub 2017 Dec 5.

PMID:
29206481
24.

Globally Important Haptophyte Algae Use Exogenous Pyrimidine Compounds More Efficiently than Thiamin.

Gutowska MA, Shome B, Sudek S, McRose DL, Hamilton M, Giovannoni SJ, Begley TP, Worden AZ.

mBio. 2017 Oct 10;8(5). pii: e01459-17. doi: 10.1128/mBio.01459-17.

25.

Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates.

Strassert JFH, Karnkowska A, Hehenberger E, Del Campo J, Kolisko M, Okamoto N, Burki F, Janouškovec J, Poirier C, Leonard G, Hallam SJ, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

ISME J. 2018 Jan;12(1):304-308. doi: 10.1038/ismej.2017.167. Epub 2017 Oct 10.

26.

Community mental health teams for older people in England: Variations in ways of working.

Verbeek H, Worden A, Wilberforce M, Brand C, Tucker S, Abendstern M, Challis D.

Int J Geriatr Psychiatry. 2018 Mar;33(3):475-481. doi: 10.1002/gps.4775. Epub 2017 Aug 23.

PMID:
28833581
27.

Quantitative biogeography of picoprasinophytes establishes ecotype distributions and significant contributions to marine phytoplankton.

Limardo AJ, Sudek S, Choi CJ, Poirier C, Rii YM, Blum M, Roth R, Goodenough U, Church MJ, Worden AZ.

Environ Microbiol. 2017 Aug;19(8):3219-3234. doi: 10.1111/1462-2920.13812. Epub 2017 Jul 13.

PMID:
28585420
28.

Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet stress.

Cuvelier ML, Guo J, Ortiz AC, van Baren MJ, Tariq MA, Partensky F, Worden AZ.

PLoS One. 2017 Mar 9;12(3):e0172135. doi: 10.1371/journal.pone.0172135. eCollection 2017.

29.

Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.

Mock T, Otillar RP, Strauss J, McMullan M, Paajanen P, Schmutz J, Salamov A, Sanges R, Toseland A, Ward BJ, Allen AE, Dupont CL, Frickenhaus S, Maumus F, Veluchamy A, Wu T, Barry KW, Falciatore A, Ferrante MI, Fortunato AE, Glöckner G, Gruber A, Hipkin R, Janech MG, Kroth PG, Leese F, Lindquist EA, Lyon BR, Martin J, Mayer C, Parker M, Quesneville H, Raymond JA, Uhlig C, Valas RE, Valentin KU, Worden AZ, Armbrust EV, Clark MD, Bowler C, Green BR, Moulton V, van Oosterhout C, Grigoriev IV.

Nature. 2017 Jan 26;541(7638):536-540. doi: 10.1038/nature20803. Epub 2017 Jan 16.

30.

Newly discovered deep-branching marine plastid lineages are numerically rare but globally distributed.

Choi CJ, Bachy C, Jaeger GS, Poirier C, Sudek L, Sarma VVSS, Mahadevan A, Giovannoni SJ, Worden AZ.

Curr Biol. 2017 Jan 9;27(1):R15-R16. doi: 10.1016/j.cub.2016.11.032.

31.

Celebrating 75 years of Nutrition Reviews.

Fukagawa NK, D'Anci KE, Donovan S, Miller JW, Starke-Reed P, Worden A.

Nutr Rev. 2017 Jan;75(1):1. No abstract available.

PMID:
27974595
32.

Morphological Identification and Single-Cell Genomics of Marine Diplonemids.

Gawryluk RMR, Del Campo J, Okamoto N, Strassert JFH, Lukeš J, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

Curr Biol. 2016 Nov 21;26(22):3053-3059. doi: 10.1016/j.cub.2016.09.013.

33.

Probing the evolution, ecology and physiology of marine protists using transcriptomics.

Caron DA, Alexander H, Allen AE, Archibald JM, Armbrust EV, Bachy C, Bell CJ, Bharti A, Dyhrman ST, Guida SM, Heidelberg KB, Kaye JZ, Metzner J, Smith SR, Worden AZ.

Nat Rev Microbiol. 2017 Jan;15(1):6-20. doi: 10.1038/nrmicro.2016.160. Epub 2016 Nov 21. Review.

PMID:
27867198
34.

Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer.

Gregory AC, Solonenko SA, Ignacio-Espinoza JC, LaButti K, Copeland A, Sudek S, Maitland A, Chittick L, Dos Santos F, Weitz JS, Worden AZ, Woyke T, Sullivan MB.

BMC Genomics. 2016 Nov 16;17(1):930.

35.

A plankton bloom shifts as the ocean warms.

Worden AZ, Wilken S.

Science. 2016 Oct 21;354(6310):287-288. No abstract available.

PMID:
27846518
36.

A trait stacking system via intra-genomic homologous recombination.

Kumar S, Worden A, Novak S, Lee R, Petolino JF.

Planta. 2016 Nov;244(5):1157-1166. Epub 2016 Sep 24.

PMID:
27663725
37.

Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla.

Waltman PH, Guo J, Reistetter EN, Purvine S, Ansong CK, van Baren MJ, Wong CH, Wei CL, Smith RD, Callister SJ, Stuart JM, Worden AZ.

PLoS One. 2016 Jul 19;11(7):e0155839. doi: 10.1371/journal.pone.0155839. eCollection 2016.

38.

Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants.

van Baren MJ, Bachy C, Reistetter EN, Purvine SO, Grimwood J, Sudek S, Yu H, Poirier C, Deerinck TJ, Kuo A, Grigoriev IV, Wong CH, Smith RD, Callister SJ, Wei CL, Schmutz J, Worden AZ.

BMC Genomics. 2016 Mar 31;17:267. doi: 10.1186/s12864-016-2585-6.

39.

Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean.

Orsi WD, Smith JM, Liu S, Liu Z, Sakamoto CM, Wilken S, Poirier C, Richards TA, Keeling PJ, Worden AZ, Santoro AE.

ISME J. 2016 Sep;10(9):2158-73. doi: 10.1038/ismej.2016.20. Epub 2016 Mar 8.

40.

Phylogenetic diversity and biogeography of the Mamiellophyceae lineage of eukaryotic phytoplankton across the oceans.

Monier A, Worden AZ, Richards TA.

Environ Microbiol Rep. 2016 Aug;8(4):461-9. doi: 10.1111/1758-2229.12390. Epub 2016 Jun 3.

PMID:
26929141
41.

Abundance and Biogeography of Picoprasinophyte Ecotypes and Other Phytoplankton in the Eastern North Pacific Ocean.

Simmons MP, Sudek S, Monier A, Limardo AJ, Jimenez V, Perle CR, Elrod VA, Pennington JT, Worden AZ.

Appl Environ Microbiol. 2016 Jan 4;82(6):1693-1705. doi: 10.1128/AEM.02730-15.

42.

Radiographic and Anatomic Evaluation of Tibial Tubercle to Trochlear Groove Distance.

Worden A, Kaar S, Owen J, Cutuk A.

J Knee Surg. 2016 Oct;29(7):589-593. Epub 2015 Dec 30.

PMID:
26716640
43.

Subtalar fusion with iliac bone free flap after a recalcitrant nonunion: Report of two cases.

Roger I, Worden A, Panattoni J, Garcia I, Aranda F, Delgado PA.

Microsurgery. 2016 Sep;36(6):501-6. doi: 10.1002/micr.22513. Epub 2015 Oct 12.

PMID:
26456638
44.

Perceptions of self-defined memory problems vary in south Asian minority older people who consult a GP and those who do not: a mixed-method pilot study.

Giebel C, Challis D, Worden A, Jolley D, Bhui KS, Lambat A, Purandare N.

Int J Geriatr Psychiatry. 2016 Apr;31(4):375-83. doi: 10.1002/gps.4337. Epub 2015 Jul 28.

PMID:
26217913
45.

Light-driven synchrony of Prochlorococcus growth and mortality in the subtropical Pacific gyre.

Ribalet F, Swalwell J, Clayton S, Jiménez V, Sudek S, Lin Y, Johnson ZI, Worden AZ, Armbrust EV.

Proc Natl Acad Sci U S A. 2015 Jun 30;112(26):8008-12. doi: 10.1073/pnas.1424279112. Epub 2015 Jun 15.

46.

Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?

Ševčíková T, Horák A, Klimeš V, Zbránková V, Demir-Hilton E, Sudek S, Jenkins J, Schmutz J, Přibyl P, Fousek J, Vlček Č, Lang BF, Oborník M, Worden AZ, Eliáš M.

Sci Rep. 2015 May 28;5:10134. doi: 10.1038/srep10134.

47.

Microbiology: Exclusive networks in the sea.

Limardo AJ, Worden AZ.

Nature. 2015 Jun 4;522(7554):36-7. doi: 10.1038/nature14530. Epub 2015 May 27. No abstract available.

PMID:
26017309
48.

Intron Invasions Trace Algal Speciation and Reveal Nearly Identical Arctic and Antarctic Micromonas Populations.

Simmons MP, Bachy C, Sudek S, van Baren MJ, Sudek L, Ares M Jr, Worden AZ.

Mol Biol Evol. 2015 Sep;32(9):2219-35. doi: 10.1093/molbev/msv122. Epub 2015 May 20.

49.

A modular gene targeting system for sequential transgene stacking in plants.

Kumar S, AlAbed D, Worden A, Novak S, Wu H, Ausmus C, Beck M, Robinson H, Minnicks T, Hemingway D, Lee R, Skaggs N, Wang L, Marri P, Gupta M.

J Biotechnol. 2015 Aug 10;207:12-20. doi: 10.1016/j.jbiotec.2015.04.006. Epub 2015 Apr 23.

PMID:
25913173
50.

Adaptation of the Barts Explanatory Model Inventory to dementia understanding in South Asian ethnic minorities.

Giebel CM, Jolley D, Zubair M, Bhui KS, Challis D, Purandare N, Worden A.

Aging Ment Health. 2016;20(6):594-602. doi: 10.1080/13607863.2015.1031637. Epub 2015 Apr 15.

PMID:
25876138

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