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Items: 1 to 50 of 85

1.

Listeriolysin O-dependent host surfaceome remodeling modulates Listeria monocytogenes invasion.

Kühbacher A, Novy K, Quereda JJ, Sachse M, Moya-Nilges M, Wollscheid B, Cossart P, Pizarro-Cerdá J.

Pathog Dis. 2018 Nov 1;76(8). doi: 10.1093/femspd/fty082.

2.

Thanatin targets the intermembrane protein complex required for lipopolysaccharide transport in Escherichia coli.

Vetterli SU, Zerbe K, Müller M, Urfer M, Mondal M, Wang SY, Moehle K, Zerbe O, Vitale A, Pessi G, Eberl L, Wollscheid B, Robinson JA.

Sci Adv. 2018 Nov 14;4(11):eaau2634. doi: 10.1126/sciadv.aau2634. eCollection 2018 Nov.

3.

The in silico human surfaceome.

Bausch-Fluck D, Goldmann U, Müller S, van Oostrum M, Müller M, Schubert OT, Wollscheid B.

Proc Natl Acad Sci U S A. 2018 Nov 13;115(46):E10988-E10997. doi: 10.1073/pnas.1808790115. Epub 2018 Oct 29.

4.

Surfaceome nanoscale organization and extracellular interaction networks.

Bausch-Fluck D, Milani ES, Wollscheid B.

Curr Opin Chem Biol. 2018 Oct 8;48:26-33. doi: 10.1016/j.cbpa.2018.09.020. [Epub ahead of print] Review.

PMID:
30308468
5.

Adverse Outcome Pathway-Driven Analysis of Liver Steatosis in Vitro: A Case Study with Cyproconazole.

Luckert C, Braeuning A, de Sousa G, Durinck S, Katsanou ES, Konstantinidou P, Machera K, Milani ES, Peijnenburg AACM, Rahmani R, Rajkovic A, Rijkers D, Spyropoulou A, Stamou M, Stoopen G, Sturla S, Wollscheid B, Zucchini-Pascal N, Lampen A.

Chem Res Toxicol. 2018 Aug 20;31(8):784-798. doi: 10.1021/acs.chemrestox.8b00112. Epub 2018 Jul 11.

PMID:
29995386
6.

Leukocyte Differentiation by Histidine-Rich Glycoprotein/Stanniocalcin-2 Complex Regulates Murine Glioma Growth through Modulation of Antitumor Immunity.

Roche FP, Pietilä I, Kaito H, Sjöström EO, Sobotzki N, Noguer O, Skare TP, Essand M, Wollscheid B, Welsh M, Claesson-Welsh L.

Mol Cancer Ther. 2018 Sep;17(9):1961-1972. doi: 10.1158/1535-7163.MCT-18-0097. Epub 2018 Jun 26.

PMID:
29945872
7.

HATRIC-based identification of receptors for orphan ligands.

Sobotzki N, Schafroth MA, Rudnicka A, Koetemann A, Marty F, Goetze S, Yamauchi Y, Carreira EM, Wollscheid B.

Nat Commun. 2018 Apr 17;9(1):1519. doi: 10.1038/s41467-018-03936-z.

8.

Proteotype profiling unmasks a viral signalling network essential for poxvirus assembly and transcriptional competence.

Novy K, Kilcher S, Omasits U, Bleck CKE, Beerli C, Vowinckel J, Martin CK, Syedbasha M, Maiolica A, White I, Mercer J, Wollscheid B.

Nat Microbiol. 2018 May;3(5):588-599. doi: 10.1038/s41564-018-0142-6. Epub 2018 Apr 9.

PMID:
29632367
9.

A Peptidomimetic Antibiotic Interacts with the Periplasmic Domain of LptD from Pseudomonas aeruginosa.

Andolina G, Bencze LC, Zerbe K, Müller M, Steinmann J, Kocherla H, Mondal M, Sobek J, Moehle K, Malojčić G, Wollscheid B, Robinson JA.

ACS Chem Biol. 2018 Mar 16;13(3):666-675. doi: 10.1021/acschembio.7b00822. Epub 2018 Jan 23.

PMID:
29359918
10.

Fc gamma receptors are expressed in the developing rat brain and activate downstream signaling molecules upon cross-linking with immune complex.

Stamou M, Grodzki AC, van Oostrum M, Wollscheid B, Lein PJ.

J Neuroinflammation. 2018 Jan 6;15(1):7. doi: 10.1186/s12974-017-1050-z.

11.

FZD4 Marks Lateral Plate Mesoderm and Signals with NORRIN to Increase Cardiomyocyte Induction from Pluripotent Stem Cell-Derived Cardiac Progenitors.

Yoon C, Song H, Yin T, Bausch-Fluck D, Frei AP, Kattman S, Dubois N, Witty AD, Hewel JA, Guo H, Emili A, Wollscheid B, Keller G, Zandstra PW.

Stem Cell Reports. 2018 Jan 9;10(1):87-100. doi: 10.1016/j.stemcr.2017.11.008. Epub 2017 Dec 14.

12.

An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics.

Omasits U, Varadarajan AR, Schmid M, Goetze S, Melidis D, Bourqui M, Nikolayeva O, Québatte M, Patrignani A, Dehio C, Frey JE, Robinson MD, Wollscheid B, Ahrens CH.

Genome Res. 2017 Dec;27(12):2083-2095. doi: 10.1101/gr.218255.116. Epub 2017 Nov 15.

13.

Laminin targeting of a peripheral nerve-highlighting peptide enables degenerated nerve visualization.

Glasgow HL, Whitney MA, Gross LA, Friedman B, Adams SR, Crisp JL, Hussain T, Frei AP, Novy K, Wollscheid B, Nguyen QT, Tsien RY.

Proc Natl Acad Sci U S A. 2016 Nov 8;113(45):12774-12779. doi: 10.1073/pnas.1611642113. Epub 2016 Oct 20.

14.

Depot specific differences in the adipogenic potential of precursors are mediated by collagenous extracellular matrix and Flotillin 2 dependent signaling.

Grandl G, Müller S, Moest H, Moser C, Wollscheid B, Wolfrum C.

Mol Metab. 2016 Jul 30;5(10):937-947. doi: 10.1016/j.molmet.2016.07.008. eCollection 2016 Oct.

15.

Proteomic Analysis of Human Brown Adipose Tissue Reveals Utilization of Coupled and Uncoupled Energy Expenditure Pathways.

Müller S, Balaz M, Stefanicka P, Varga L, Amri EZ, Ukropec J, Wollscheid B, Wolfrum C.

Sci Rep. 2016 Jul 15;6:30030. doi: 10.1038/srep30030.

16.

Sulforaphane Preconditioning Sensitizes Human Colon Cancer Cells towards the Bioreductive Anticancer Prodrug PR-104A.

Erzinger MM, Bovet C, Hecht KM, Senger S, Winiker P, Sobotzki N, Cristea S, Beerenwinkel N, Shay JW, Marra G, Wollscheid B, Sturla SJ.

PLoS One. 2016 Mar 7;11(3):e0150219. doi: 10.1371/journal.pone.0150219. eCollection 2016.

17.

Kin of IRRE-like Protein 2 Is a Phosphorylated Glycoprotein That Regulates Basal Insulin Secretion.

Yesildag B, Bock T, Herrmanns K, Wollscheid B, Stoffel M.

J Biol Chem. 2015 Oct 23;290(43):25891-906. doi: 10.1074/jbc.M115.684704. Epub 2015 Aug 31.

18.

A peptide resource for the analysis of Staphylococcus aureus in host-pathogen interaction studies.

Depke M, Michalik S, Rabe A, Surmann K, Brinkmann L, Jehmlich N, Bernhardt J, Hecker M, Wollscheid B, Sun Z, Moritz RL, Völker U, Schmidt F.

Proteomics. 2015 Nov;15(21):3648-61. doi: 10.1002/pmic.201500091. Epub 2015 Sep 7.

19.

CD24 tracks divergent pluripotent states in mouse and human cells.

Shakiba N, White CA, Lipsitz YY, Yachie-Kinoshita A, Tonge PD, Hussein SM, Puri MC, Elbaz J, Morrissey-Scoot J, Li M, Munoz J, Benevento M, Rogers IM, Hanna JH, Heck AJ, Wollscheid B, Nagy A, Zandstra PW.

Nat Commun. 2015 Jun 16;6:7329. doi: 10.1038/ncomms8329.

20.

Surfaceome of classical Hodgkin and non-Hodgkin lymphoma.

Hofmann A, Thiesler T, Gerrits B, Behnke S, Sobotzki N, Omasits U, Bausch-Fluck D, Bock T, Aebersold R, Moch H, Tinguely M, Wollscheid B.

Proteomics Clin Appl. 2015 Aug;9(7-8):661-70. doi: 10.1002/prca.201400146.

21.

A mass spectrometric-derived cell surface protein atlas.

Bausch-Fluck D, Hofmann A, Bock T, Frei AP, Cerciello F, Jacobs A, Moest H, Omasits U, Gundry RL, Yoon C, Schiess R, Schmidt A, Mirkowska P, Härtlová A, Van Eyk JE, Bourquin JP, Aebersold R, Boheler KR, Zandstra P, Wollscheid B.

PLoS One. 2015 Apr 20;10(3):e0121314. doi: 10.1371/journal.pone.0121314. eCollection 2015.

22.

Carbonic anhydrase XII is a new therapeutic target to overcome chemoresistance in cancer cells.

Kopecka J, Campia I, Jacobs A, Frei AP, Ghigo D, Wollscheid B, Riganti C.

Oncotarget. 2015 Mar 30;6(9):6776-93.

23.

Deep sequencing and proteomic analysis of the microRNA-induced silencing complex in human red blood cells.

Azzouzi I, Moest H, Wollscheid B, Schmugge M, Eekels JJM, Speer O.

Exp Hematol. 2015 May;43(5):382-392. doi: 10.1016/j.exphem.2015.01.007. Epub 2015 Feb 12.

PMID:
25681748
24.

Image-based RNA interference screening reveals an individual dependence of acute lymphoblastic leukemia on stromal cysteine support.

Boutter J, Huang Y, Marovca B, Vonderheit A, Grotzer MA, Eckert C, Cario G, Wollscheid B, Horvath P, Bornhauser BC, Bourquin JP.

Oncotarget. 2014 Nov 30;5(22):11501-12.

25.

Comparative proteome analysis reveals conserved and specific adaptation patterns of Staphylococcus aureus after internalization by different types of human non-professional phagocytic host cells.

Surmann K, Michalik S, Hildebrandt P, Gierok P, Depke M, Brinkmann L, Bernhardt J, Salazar MG, Sun Z, Shteynberg D, Kusebauch U, Moritz RL, Wollscheid B, Lalk M, Völker U, Schmidt F.

Front Microbiol. 2014 Aug 1;5:392. doi: 10.3389/fmicb.2014.00392. eCollection 2014.

26.

A human pluripotent stem cell surface N-glycoproteome resource reveals markers, extracellular epitopes, and drug targets.

Boheler KR, Bhattacharya S, Kropp EM, Chuppa S, Riordon DR, Bausch-Fluck D, Burridge PW, Wu JC, Wersto RP, Chan GC, Rao S, Wollscheid B, Gundry RL.

Stem Cell Reports. 2014 Jun 6;3(1):185-203. doi: 10.1016/j.stemcr.2014.05.002. eCollection 2014 Jul 8.

27.

Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data.

Qeli E, Omasits U, Goetze S, Stekhoven DJ, Frey JE, Basler K, Wollscheid B, Brunner E, Ahrens CH.

J Proteomics. 2014 Aug 28;108:269-83. doi: 10.1016/j.jprot.2014.05.011. Epub 2014 May 27.

PMID:
24878426
28.

Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness.

Liu Y, Chen J, Sethi A, Li QK, Chen L, Collins B, Gillet LC, Wollscheid B, Zhang H, Aebersold R.

Mol Cell Proteomics. 2014 Jul;13(7):1753-68. doi: 10.1074/mcp.M114.038273. Epub 2014 Apr 16.

29.

Combine and conquer: surfactants, solvents, and chaotropes for robust mass spectrometry based analyses of membrane proteins.

Waas M, Bhattacharya S, Chuppa S, Wu X, Jensen DR, Omasits U, Wollscheid B, Volkman BF, Noon KR, Gundry RL.

Anal Chem. 2014 Feb 4;86(3):1551-9. doi: 10.1021/ac403185a. Epub 2014 Jan 21.

30.

Transcriptomic responses of cancerous and noncancerous human colon cells to sulforaphane and selenium.

Constantinescu S, Hecht K, Sobotzki N, Erzinger MM, Bovet C, Shay JW, Wollscheid B, Sturla SJ, Marra G, Beerenwinkel N.

Chem Res Toxicol. 2014 Mar 17;27(3):377-86. doi: 10.1021/tx400427t. Epub 2014 Jan 13.

PMID:
24383545
31.

Identification of a seven glycopeptide signature for malignant pleural mesothelioma in human serum by selected reaction monitoring.

Cerciello F, Choi M, Nicastri A, Bausch-Fluck D, Ziegler A, Vitek O, Felley-Bosco E, Stahel R, Aebersold R, Wollscheid B.

Clin Proteomics. 2013 Nov 8;10(1):16. doi: 10.1186/1559-0275-10-16.

32.

Protter: interactive protein feature visualization and integration with experimental proteomic data.

Omasits U, Ahrens CH, Müller S, Wollscheid B.

Bioinformatics. 2014 Mar 15;30(6):884-6. doi: 10.1093/bioinformatics/btt607. Epub 2013 Oct 24.

33.

Malfunctioning of adipocytes in obesity is linked to quantitative surfaceome changes.

Moest H, Frei AP, Bhattacharya I, Geiger M, Wollscheid B, Wolfrum C.

Biochim Biophys Acta. 2013 Jul;1831(7):1208-16.

34.

Surfaceome profiling reveals regulators of neural stem cell function.

DeVeale B, Bausch-Fluck D, Seaberg R, Runciman S, Akbarian V, Karpowicz P, Yoon C, Song H, Leeder R, Zandstra PW, Wollscheid B, van der Kooy D.

Stem Cells. 2014 Jan;32(1):258-68. doi: 10.1002/stem.1550.

35.

Vaccinia virus entry is followed by core activation and proteasome-mediated release of the immunomodulatory effector VH1 from lateral bodies.

Schmidt FI, Bleck CK, Reh L, Novy K, Wollscheid B, Helenius A, Stahlberg H, Mercer J.

Cell Rep. 2013 Aug 15;4(3):464-76. doi: 10.1016/j.celrep.2013.06.028. Epub 2013 Jul 25.

36.

The hemolymph proteome of fed and starved Drosophila larvae.

Handke B, Poernbacher I, Goetze S, Ahrens CH, Omasits U, Marty F, Simigdala N, Meyer I, Wollscheid B, Brunner E, Hafen E, Lehner CF.

PLoS One. 2013 Jun 20;8(6):e67208. doi: 10.1371/journal.pone.0067208. Print 2013.

37.

Ligand-based receptor identification on living cells and tissues using TRICEPS.

Frei AP, Moest H, Novy K, Wollscheid B.

Nat Protoc. 2013;8(7):1321-36. doi: 10.1038/nprot.2013.072. Epub 2013 Jun 13.

PMID:
23764939
38.

Leukemia surfaceome analysis reveals new disease-associated features.

Mirkowska P, Hofmann A, Sedek L, Slamova L, Mejstrikova E, Szczepanski T, Schmitz M, Cario G, Stanulla M, Schrappe M, van der Velden VH, Bornhauser BC, Wollscheid B, Bourquin JP.

Blood. 2013 Jun 20;121(25):e149-59. doi: 10.1182/blood-2012-11-468702. Epub 2013 May 6.

39.

Integrin-mediated signaling induced by simian virus 40 leads to transient uncoupling of cortical actin and the plasma membrane.

Stergiou L, Bauer M, Mair W, Bausch-Fluck D, Drayman N, Wollscheid B, Oppenheim A, Pelkmans L.

PLoS One. 2013;8(2):e55799. doi: 10.1371/journal.pone.0055799. Epub 2013 Feb 7.

40.

N-glycoprotein SRMAtlas: a resource of mass spectrometric assays for N-glycosites enabling consistent and multiplexed protein quantification for clinical applications.

Hüttenhain R, Surinova S, Ossola R, Sun Z, Campbell D, Cerciello F, Schiess R, Bausch-Fluck D, Rosenberger G, Chen J, Rinner O, Kusebauch U, Hajdúch M, Moritz RL, Wollscheid B, Aebersold R.

Mol Cell Proteomics. 2013 Apr;12(4):1005-16. doi: 10.1074/mcp.O112.026617. Epub 2013 Feb 13.

41.

A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis.

Picotti P, Clément-Ziza M, Lam H, Campbell DS, Schmidt A, Deutsch EW, Röst H, Sun Z, Rinner O, Reiter L, Shen Q, Michaelson JJ, Frei A, Alberti S, Kusebauch U, Wollscheid B, Moritz RL, Beyer A, Aebersold R.

Nature. 2013 Feb 14;494(7436):266-70. doi: 10.1038/nature11835. Epub 2013 Jan 20.

42.

CSC technology: selective labeling of glycoproteins by mild oxidation to phenotype cells.

Hofmann A, Bausch-Fluck D, Wollscheid B.

Methods Mol Biol. 2013;951:33-43. doi: 10.1007/978-1-62703-146-2_3.

PMID:
23296522
43.

Proteomics approaches for the analysis of enriched microbial subpopulations and visualization of complex functional information.

Bernhardt J, Michalik S, Wollscheid B, Völker U, Schmidt F.

Curr Opin Biotechnol. 2013 Feb;24(1):112-9. doi: 10.1016/j.copbio.2012.10.009. Epub 2012 Nov 7. Review.

PMID:
23141770
44.

Direct identification of ligand-receptor interactions on living cells and tissues.

Frei AP, Jeon OY, Kilcher S, Moest H, Henning LM, Jost C, Plückthun A, Mercer J, Aebersold R, Carreira EM, Wollscheid B.

Nat Biotechnol. 2012 Oct;30(10):997-1001. doi: 10.1038/nbt.2354. Epub 2012 Sep 16.

PMID:
22983091
45.

Proteomic analysis reveals drug accessible cell surface N-glycoproteins of primary and established glioblastoma cell lines.

Bock T, Moest H, Omasits U, Dolski S, Lundberg E, Frei A, Hofmann A, Bausch-Fluck D, Jacobs A, Krayenbuehl N, Uhlen M, Aebersold R, Frei K, Wollscheid B.

J Proteome Res. 2012 Oct 5;11(10):4885-93. doi: 10.1021/pr300360a. Epub 2012 Aug 31.

PMID:
22909291
46.

Cell surface capturing technologies for the surfaceome discovery of hepatocytes.

Bausch-Fluck D, Hofmann A, Wollscheid B.

Methods Mol Biol. 2012;909:1-16. doi: 10.1007/978-1-61779-959-4_1.

PMID:
22903705
47.

Teneurin protein family: an emerging role in human tumorigenesis and drug resistance.

Ziegler A, Corvalán A, Roa I, Brañes JA, Wollscheid B.

Cancer Lett. 2012 Dec 29;326(1):1-7. doi: 10.1016/j.canlet.2012.07.021. Epub 2012 Jul 24. Review.

PMID:
22841666
48.

The stalk domain and the glycosylation status of the activating natural killer cell receptor NKp30 are important for ligand binding.

Hartmann J, Tran TV, Kaudeer J, Oberle K, Herrmann J, Quagliano I, Abel T, Cohnen A, Gatterdam V, Jacobs A, Wollscheid B, Tampé R, Watzl C, Diefenbach A, Koch J.

J Biol Chem. 2012 Sep 7;287(37):31527-39. doi: 10.1074/jbc.M111.304238. Epub 2012 Jul 17.

49.

Identification and functional characterization of pVHL-dependent cell surface proteins in renal cell carcinoma.

Boysen G, Bausch-Fluck D, Thoma CR, Nowicka AM, Stiehl DP, Cima I, Luu VD, von Teichman A, Hermanns T, Sulser T, Ingold-Heppner B, Fankhauser N, Wenger RH, Krek W, Schraml P, Wollscheid B, Moch H.

Neoplasia. 2012 Jun;14(6):535-46.

50.

A cell surfaceome map for immunophenotyping and sorting pluripotent stem cells.

Gundry RL, Riordon DR, Tarasova Y, Chuppa S, Bhattacharya S, Juhasz O, Wiedemeier O, Milanovich S, Noto FK, Tchernyshyov I, Raginski K, Bausch-Fluck D, Tae HJ, Marshall S, Duncan SA, Wollscheid B, Wersto RP, Rao S, Van Eyk JE, Boheler KR.

Mol Cell Proteomics. 2012 Aug;11(8):303-16. doi: 10.1074/mcp.M112.018135. Epub 2012 Apr 6.

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