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Sulfonium Ion Condensation: The Burden Borne by SAM Synthetase.

Lewis CA Jr, Wolfenden R.

Biochemistry. 2018 Jul 3;57(26):3549-3551. doi: 10.1021/acs.biochem.8b00477. Epub 2018 May 31.


Three Pyrimidine Decarboxylations in the Absence of a Catalyst.

Lewis CA Jr, Shen L, Yang W, Wolfenden R.

Biochemistry. 2017 Mar 14;56(10):1498-1503. doi: 10.1021/acs.biochem.7b00055. Epub 2017 Mar 6.


In ovo evaluation of FloraMax®-B11 on Marek's disease HVT vaccine protective efficacy, hatchability, microbiota composition, morphometric analysis, and Salmonella enteritidis infection in broiler chickens.

Teague KD, Graham LE, Dunn JR, Cheng HH, Anthony N, Latorre JD, Menconi A, Wolfenden RE, Wolfenden AD, Mahaffey BD, Baxter M, Hernandez-Velasco X, Merino-Guzman R, Bielke LR, Hargis BM, Tellez G.

Poult Sci. 2017 Jul 1;96(7):2074-2082. doi: 10.3382/ps/pew494.


Evaluation and Selection of Bacillus Species Based on Enzyme Production, Antimicrobial Activity, and Biofilm Synthesis as Direct-Fed Microbial Candidates for Poultry.

Latorre JD, Hernandez-Velasco X, Wolfenden RE, Vicente JL, Wolfenden AD, Menconi A, Bielke LR, Hargis BM, Tellez G.

Front Vet Sci. 2016 Oct 20;3:95. eCollection 2016.


Cytosine deamination and the precipitous decline of spontaneous mutation during Earth's history.

Lewis CA Jr, Crayle J, Zhou S, Swanstrom R, Wolfenden R.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8194-9. doi: 10.1073/pnas.1607580113. Epub 2016 Jul 5.


Selection of Bacillus spp. for Cellulase and Xylanase Production as Direct-Fed Microbials to Reduce Digesta Viscosity and Clostridium perfringens Proliferation Using an in vitro Digestive Model in Different Poultry Diets.

Latorre JD, Hernandez-Velasco X, Kuttappan VA, Wolfenden RE, Vicente JL, Wolfenden AD, Bielke LR, Prado-Rebolledo OF, Morales E, Hargis BM, Tellez G.

Front Vet Sci. 2015 Aug 17;2:25. doi: 10.3389/fvets.2015.00025. eCollection 2015.


tRNA acceptor-stem and anticodon bases embed separate features of amino acid chemistry.

Carter CW Jr, Wolfenden R.

RNA Biol. 2016;13(2):145-51. doi: 10.1080/15476286.2015.1112488. Epub 2015 Nov 23.


Evaluation of a Bacillus direct-fed microbial candidate on digesta viscosity, bacterial translocation, microbiota composition and bone mineralisation in broiler chickens fed on a rye-based diet.

Latorre JD, Hernandez-Velasco X, Bielke LR, Vicente JL, Wolfenden R, Menconi A, Hargis BM, Tellez G.

Br Poult Sci. 2015;56(6):723-32. doi: 10.1080/00071668.2015.1101053. Epub 2015 Dec 3.


tRNA acceptor stem and anticodon bases form independent codes related to protein folding.

Carter CW Jr, Wolfenden R.

Proc Natl Acad Sci U S A. 2015 Jun 16;112(24):7489-94. doi: 10.1073/pnas.1507569112. Epub 2015 Jun 1.


Temperature dependence of amino acid hydrophobicities.

Wolfenden R, Lewis CA Jr, Yuan Y, Carter CW Jr.

Proc Natl Acad Sci U S A. 2015 Jun 16;112(24):7484-8. doi: 10.1073/pnas.1507565112. Epub 2015 Jun 1.


The triple threat of HIV-1 protease inhibitors.

Potempa M, Lee SK, Wolfenden R, Swanstrom R.

Curr Top Microbiol Immunol. 2015;389:203-41. doi: 10.1007/82_2015_438. Review.


Massive thermal acceleration of the emergence of primordial chemistry, the incidence of spontaneous mutation, and the evolution of enzymes.

Wolfenden R.

J Biol Chem. 2014 Oct 31;289(44):30198-204. doi: 10.1074/jbc.R114.567081. Epub 2014 Sep 10. Review.


Primordial chemistry and enzyme evolution in a hot environment.

Wolfenden R.

Cell Mol Life Sci. 2014 Aug;71(15):2909-15. doi: 10.1007/s00018-014-1587-2. Epub 2014 Mar 13.


Role of a Bacillus subtilis Direct-Fed Microbial on Digesta Viscosity, Bacterial Translocation, and Bone Mineralization in Turkey Poults Fed with a Rye-Based Diet.

Latorre JD, Hernandez-Velasco X, Kogut MH, Vicente JL, Wolfenden R, Wolfenden A, Hargis BM, Kuttappan VA, Tellez G.

Front Vet Sci. 2014 Dec 16;1:26. doi: 10.3389/fvets.2014.00026. eCollection 2014.


The nonenzymatic decomposition of guanidines and amidines.

Lewis CA Jr, Wolfenden R.

J Am Chem Soc. 2014 Jan 8;136(1):130-6. doi: 10.1021/ja411927k. Epub 2013 Dec 20.


Catalysis by desolvation: the catalytic prowess of SAM-dependent halide-alkylating enzymes.

Lohman DC, Edwards DR, Wolfenden R.

J Am Chem Soc. 2013 Oct 2;135(39):14473-5. doi: 10.1021/ja406381b. Epub 2013 Sep 18.


Kinetic mechanism of human histidine triad nucleotide binding protein 1.

Zhou X, Chou TF, Aubol BE, Park CJ, Wolfenden R, Adams J, Wagner CR.

Biochemistry. 2013 May 21;52(20):3588-600. doi: 10.1021/bi301616c. Epub 2013 May 7.


Flight of a cytidine deaminase complex with an imperfect transition state analogue inhibitor: mass spectrometric evidence for the presence of a trapped water molecule.

Schroeder GK, Zhou L, Snider MJ, Chen X, Wolfenden R.

Biochemistry. 2012 Aug 14;51(32):6476-86. Epub 2012 Aug 2.


Hydrolysis of N-alkyl sulfamates and the catalytic efficiency of an S-N cleaving sulfamidase.

Lohman DC, Wolfenden R, Edwards DR.

J Org Chem. 2012 Mar 16;77(6):2907-10. doi: 10.1021/jo300198w. Epub 2012 Feb 29.


Catalytic proficiency: the extreme case of S-O cleaving sulfatases.

Edwards DR, Lohman DC, Wolfenden R.

J Am Chem Soc. 2012 Jan 11;134(1):525-31. doi: 10.1021/ja208827q. Epub 2011 Dec 22.


Evaluation of selected direct-fed microbial candidates on live performance and Salmonella reduction in commercial turkey brooding houses.

Wolfenden RE, Pumford NR, Morgan MJ, Shivaramaiah S, Wolfenden AD, Pixley CM, Green J, Tellez G, Hargis BM.

Poult Sci. 2011 Nov;90(11):2627-31. doi: 10.3382/ps.2011-01360.


The "neutral" hydrolysis of simple carboxylic esters in water and the rate enhancements produced by acetylcholinesterase and other carboxylic acid esterases.

Wolfenden R, Yuan Y.

J Am Chem Soc. 2011 Sep 7;133(35):13821-3. doi: 10.1021/ja204116a. Epub 2011 Aug 11.


The role of an early Salmonella Typhimurium infection as a predisposing factor for necrotic enteritis in a laboratory challenge model.

Shivaramaiah S, Wolfenden RE, Barta JR, Morgan MJ, Wolfenden AD, Hargis BM, Téllez G.

Avian Dis. 2011 Jun;55(2):319-23.


Amide bonds to the nitrogen atoms of cysteine and serine as "weak points" in the backbones of proteins.

Lewis CA Jr, Wolfenden R.

Biochemistry. 2011 Aug 23;50(33):7259-64. doi: 10.1021/bi200813s. Epub 2011 Jul 25.


Evaluation of Bacillus species as potential candidates for direct-fed microbials in commercial poultry.

Shivaramaiah S, Pumford NR, Morgan MJ, Wolfenden RE, Wolfenden AD, Torres-Rodríguez A, Hargis BM, Téllez G.

Poult Sci. 2011 Jul;90(7):1574-80. doi: 10.3382/ps.2010-00745.


Benchmark reaction rates, the stability of biological molecules in water, and the evolution of catalytic power in enzymes.

Wolfenden R.

Annu Rev Biochem. 2011;80:645-67. doi: 10.1146/annurev-biochem-060409-093051. Review.


Enhancement of the rate of pyrophosphate hydrolysis by nonenzymatic catalysts and by inorganic pyrophosphatase.

Stockbridge RB, Wolfenden R.

J Biol Chem. 2011 May 27;286(21):18538-46. doi: 10.1074/jbc.M110.214510. Epub 2011 Apr 1.


Kinetic challenges facing oxalate, malonate, acetoacetate, and oxaloacetate decarboxylases.

Wolfenden R, Lewis CA Jr, Yuan Y.

J Am Chem Soc. 2011 Apr 20;133(15):5683-5. doi: 10.1021/ja111457h. Epub 2011 Mar 24.


Impact of temperature on the time required for the establishment of primordial biochemistry, and for the evolution of enzymes.

Stockbridge RB, Lewis CA Jr, Yuan Y, Wolfenden R.

Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):22102-5. doi: 10.1073/pnas.1013647107. Epub 2010 Dec 1.


Improved hatchability and posthatch performance in turkey poults receiving a dextrin-iodinated casein solution in ovo.

Bottje W, Wolfenden A, Ding L, Wolfenden R, Morgan M, Pumford N, Lassiter K, Duncan G, Smith T, Slagle T, Hargis B.

Poult Sci. 2010 Dec;89(12):2646-50. doi: 10.3382/ps.2010-00932.


Development and evaluation of candidate recombinant Salmonella-vectored Salmonella vaccines.

Wolfenden RE, Layton SL, Wolfenden AD, Khatiwara A, Gaona-Ramírez G, Pumford NR, Cole K, Kwon YM, Tellez G, Bergman LR, Hargis BM.

Poult Sci. 2010 Nov;89(11):2370-9. doi: 10.3382/ps.2010-00702.


The rate of spontaneous cleavage of the glycosidic bond of adenosine.

Stockbridge RB, Schroeder GK, Wolfenden R.

Bioorg Chem. 2010 Oct;38(5):224-8. doi: 10.1016/j.bioorg.2010.05.003. Epub 2010 Jun 4.


The hydrolysis of phosphate diesters in cyclohexane and acetone.

Stockbridge RB, Wolfenden R.

Chem Commun (Camb). 2010 Jun 28;46(24):4306-8. doi: 10.1039/c0cc00229a. Epub 2010 May 6.


Climate change and the integrity of science.

Gleick PH, Adams RM, Amasino RM, Anders E, Anderson DJ, Anderson WW, Anselin LE, Arroyo MK, Asfaw B, Ayala FJ, Bax A, Bebbington AJ, Bell G, Bennett MV, Bennetzen JL, Berenbaum MR, Berlin OB, Bjorkman PJ, Blackburn E, Blamont JE, Botchan MR, Boyer JS, Boyle EA, Branton D, Briggs SP, Briggs WR, Brill WJ, Britten RJ, Broecker WS, Brown JH, Brown PO, Brunger AT, Cairns J Jr, Canfield DE, Carpenter SR, Carrington JC, Cashmore AR, Castilla JC, Cazenave A, Chapin FS 3rd, Ciechanover AJ, Clapham DE, Clark WC, Clayton RN, Coe MD, Conwell EM, Cowling EB, Cowling RM, Cox CS, Croteau RB, Crothers DM, Crutzen PJ, Daily GC, Dalrymple GB, Dangl JL, Darst SA, Davies DR, Davis MB, De Camilli PV, Dean C, DeFries RS, Deisenhofer J, Delmer DP, DeLong EF, DeRosier DJ, Diener TO, Dirzo R, Dixon JE, Donoghue MJ, Doolittle RF, Dunne T, Ehrlich PR, Eisenstadt SN, Eisner T, Emanuel KA, Englander SW, Ernst WG, Falkowski PG, Feher G, Ferejohn JA, Fersht A, Fischer EH, Fischer R, Flannery KV, Frank J, Frey PA, Fridovich I, Frieden C, Futuyma DJ, Gardner WR, Garrett CJ, Gilbert W, Goldberg RB, Goodenough WH, Goodman CS, Goodman M, Greengard P, Hake S, Hammel G, Hanson S, Harrison SC, Hart SR, Hartl DL, Haselkorn R, Hawkes K, Hayes JM, Hille B, Hökfelt T, House JS, Hout M, Hunten DM, Izquierdo IA, Jagendorf AT, Janzen DH, Jeanloz R, Jencks CS, Jury WA, Kaback HR, Kailath T, Kay P, Kay SA, Kennedy D, Kerr A, Kessler RC, Khush GS, Kieffer SW, Kirch PV, Kirk K, Kivelson MG, Klinman JP, Klug A, Knopoff L, Kornberg H, Kutzbach JE, Lagarias JC, Lambeck K, Landy A, Langmuir CH, Larkins BA, Le Pichon XT, Lenski RE, Leopold EB, Levin SA, Levitt M, Likens GE, Lippincott-Schwartz J, Lorand L, Lovejoy CO, Lynch M, Mabogunje AL, Malone TF, Manabe S, Marcus J, Massey DS, McWilliams JC, Medina E, Melosh HJ, Meltzer DJ, Michener CD, Miles EL, Mooney HA, Moore PB, Morel FM, Mosley-Thompson ES, Moss B, Munk WH, Myers N, Nair GB, Nathans J, Nester EW, Nicoll RA, Novick RP, O'Connell JF, Olsen PE, Opdyke ND, Oster GF, Ostrom E, Pace NR, Paine RT, Palmiter RD, Pedlosky J, Petsko GA, Pettengill GH, Philander SG, Piperno DR, Pollard TD, Price PB Jr, Reichard PA, Reskin BF, Ricklefs RE, Rivest RL, Roberts JD, Romney AK, Rossmann MG, Russell DW, Rutter WJ, Sabloff JA, Sagdeev RZ, Sahlins MD, Salmond A, Sanes JR, Schekman R, Schellnhuber J, Schindler DW, Schmitt J, Schneider SH, Schramm VL, Sederoff RR, Shatz CJ, Sherman F, Sidman RL, Sieh K, Simons EL, Singer BH, Singer MF, Skyrms B, Sleep NH, Smith BD, Snyder SH, Sokal RR, Spencer CS, Steitz TA, Strier KB, Südhof TC, Taylor SS, Terborgh J, Thomas DH, Thompson LG, Tjian RT, Turner MG, Uyeda S, Valentine JW, Valentine JS, Van Etten JL, van Holde KE, Vaughan M, Verba S, von Hippel PH, Wake DB, Walker A, Walker JE, Watson EB, Watson PJ, Weigel D, Wessler SR, West-Eberhard MJ, White TD, Wilson WJ, Wolfenden RV, Wood JA, Woodwell GM, Wright HE Jr, Wu C, Wunsch C, Zoback ML.

Science. 2010 May 7;328(5979):689-90. doi: 10.1126/science.328.5979.689. No abstract available. Erratum in: Science. 2010 May 14;328(5980):826.


Contrasting behavior of conformationally locked carbocyclic nucleosides of adenosine and cytidine as substrates for deaminases.

Marquez VE, Schroeder GK, Ludek OR, Siddiqui MA, Ezzitouni A, Wolfenden R.

Nucleosides Nucleotides Nucleic Acids. 2009 May;28(5):614-32. doi: 10.1080/15257770903091904.


Phosphate monoester hydrolysis in cyclohexane.

Stockbridge RB, Wolfenden R.

J Am Chem Soc. 2009 Dec 30;131(51):18248-9. doi: 10.1021/ja907967y.


Synthesis and conformational analysis of locked carbocyclic analogues of 1,3-diazepinone riboside, a high-affinity cytidine deaminase inhibitor.

Ludek OR, Schroeder GK, Liao C, Russ PL, Wolfenden R, Marquez VE.

J Org Chem. 2009 Aug 21;74(16):6212-23. doi: 10.1021/jo901127a.


The intrinsic reactivity of ATP and the catalytic proficiencies of kinases acting on glucose, N-acetylgalactosamine, and homoserine: a thermodynamic analysis.

Stockbridge RB, Wolfenden R.

J Biol Chem. 2009 Aug 21;284(34):22747-57. doi: 10.1074/jbc.M109.017806. Epub 2009 Jun 15.


Uroporphyrinogen decarboxylation as a benchmark for the catalytic proficiency of enzymes.

Lewis CA Jr, Wolfenden R.

Proc Natl Acad Sci U S A. 2008 Nov 11;105(45):17328-33. doi: 10.1073/pnas.0809838105. Epub 2008 Nov 6.


Synthesis of conformationally locked carbocyclic 1,3-diazepinone nucleosides as inhibitors of cytidine deaminase.

Ludek OR, Schroeder GK, Wolfenden R, Marquez VE.

Nucleic Acids Symp Ser (Oxf). 2008;(52):659-60. doi: 10.1093/nass/nrn333.


Free-flow electrophoresis for top-down proteomics by Fourier transform ion cyclotron resonance mass spectrometry.

Ouvry-Patat SA, Torres MP, Quek HH, Gelfand CA, O'Mullan P, Nissum M, Schroeder GK, Han J, Elliott M, Dryhurst D, Ausio J, Wolfenden R, Borchers CH.

Proteomics. 2008 Jul;8(14):2798-808. doi: 10.1002/pmic.200800079.


Fritz Albert Lipmann: June 12, 1899-July 24, 1986.

Jencks WP, Wolfenden RV.

Biogr Mem Natl Acad Sci. 2006;88:246-66. No abstract available.


Rates of spontaneous cleavage of glucose, fructose, sucrose, and trehalose in water, and the catalytic proficiencies of invertase and trehalas.

Wolfenden R, Yuan Y.

J Am Chem Soc. 2008 Jun 18;130(24):7548-9. doi: 10.1021/ja802206s. Epub 2008 May 28.


Rates of spontaneous disintegration of DNA and the rate enhancements produced by DNA glycosylases and deaminases.

Schroeder GK, Wolfenden R.

Biochemistry. 2007 Nov 27;46(47):13638-47. Epub 2007 Nov 1.


Experimental measures of amino acid hydrophobicity and the topology of transmembrane and globular proteins.

Wolfenden R.

J Gen Physiol. 2007 May;129(5):357-62. Epub 2007 Apr 16. Review. No abstract available.


The rate enhancement produced by the ribosome: an improved model.

Schroeder GK, Wolfenden R.

Biochemistry. 2007 Apr 3;46(13):4037-44. Epub 2007 Mar 13.


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