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Complete Genome Sequences of Streptococcus mitis Strains Isolated from the Oral Cavity and Urogenital Tract of a Woman and Her Male Sexual Partner.

Mores CR, Price TK, Brassil B, Putonti C, Wolfe AJ.

Microbiol Resour Announc. 2020 Jan 2;9(1). pii: e01379-19. doi: 10.1128/MRA.01379-19.


Draft Genome Sequences of Two Pseudomonas aeruginosa Isolates from the Female Urogenital Tract.

Johnson G, Mores CR, Wolfe AJ, Putonti C.

Microbiol Resour Announc. 2020 Jan 2;9(1). pii: e01378-19. doi: 10.1128/MRA.01378-19.


"Sterile" Epididymal Abscess With Contralateral Intratesticular Recurrence.

Doshi CP, Montgomery J, Quek ML, Turk TMT, Wolfe AJ, Bajic P.

Urology. 2019 Nov 29. pii: S0090-4295(19)31046-5. doi: 10.1016/j.urology.2019.11.021. [Epub ahead of print] No abstract available.


Complete Genome Sequence of a Pseudomonas aeruginosa Isolate from a Kidney Stone.

Johnson G, Stark N, Wolfe AJ, Putonti C.

Microbiol Resour Announc. 2019 Sep 19;8(38). pii: e01073-19. doi: 10.1128/MRA.01073-19.


Oral probiotics and the female urinary microbiome: a double-blinded randomized placebo-controlled trial.

Wolff BJ, Price TK, Joyce CJ, Wolfe AJ, Mueller ER.

Int Urol Nephrol. 2019 Dec;51(12):2149-2159. doi: 10.1007/s11255-019-02282-3. Epub 2019 Sep 18.


Benchmarking urine storage and collection conditions for evaluating the female urinary microbiome.

Jung CE, Chopyk J, Shin JH, Lukacz ES, Brubaker L, Schwanemann LK, Knight R, Wolfe AJ, Pride DT.

Sci Rep. 2019 Sep 16;9(1):13409. doi: 10.1038/s41598-019-49823-5.


High-Throughput Screening of Protein-Detergent Complexes Using Fluorescence Polarization Spectroscopy.

Wolfe AJ, Parella KJ, Movileanu L.

Curr Protoc Protein Sci. 2019 Sep;97(1):e96. doi: 10.1002/cpps.96.


Draft Genome Sequences of Six Lactobacillus gasseri and Three Lactobacillus paragasseri Strains Isolated from the Female Bladder.

Putonti C, Akhnoukh V, Anagnostopoulos Z, Bilek M, Colgan J, El Idrissi S, Magnuszewski K, Marino S, Szymulewski M, Tyahla M, Yanchuk V, Miller-Ensminger T, Batrich M, Brassil B, Mormando R, Johnson G, Wolfe AJ.

Microbiol Resour Announc. 2019 Sep 12;8(37). pii: e00973-19. doi: 10.1128/MRA.00973-19.


The urobiome of continent adult women: a cross-sectional study.

Price TK, Hilt EE, Thomas-White K, Mueller ER, Wolfe AJ, Brubaker L.

BJOG. 2020 Jan;127(2):193-201. doi: 10.1111/1471-0528.15920. Epub 2019 Oct 9.


Draft Genome Sequences of 11 Lactobacillus jensenii Strains Isolated from the Female Bladder.

Putonti C, Ahmad A, Baddoo G, Diaz J, Do M, Gallian N, Lorentzen C, Mohammed H, Murphy J, Olu-Ajeigbe A, Yang T, Miller-Ensminger T, Stark N, Maskeri L, Van Dusen J, Wolfe AJ.

Microbiol Resour Announc. 2019 Aug 29;8(35). pii: e00970-19. doi: 10.1128/MRA.00970-19.


Post-translational Protein Acetylation: An Elegant Mechanism for Bacteria to Dynamically Regulate Metabolic Functions.

Christensen DG, Xie X, Basisty N, Byrnes J, McSweeney S, Schilling B, Wolfe AJ.

Front Microbiol. 2019 Jul 12;10:1604. doi: 10.3389/fmicb.2019.01604. eCollection 2019. Review.


The microbiome of calcium-based urinary stones.

Dornbier RA, Bajic P, Van Kuiken M, Jardaneh A, Lin H, Gao X, Knudsen B, Dong Q, Wolfe AJ, Schwaderer AL.

Urolithiasis. 2019 Jun 25. doi: 10.1007/s00240-019-01146-w. [Epub ahead of print]


Analysis of crystalline and solution states of ligand-free spermidine N-acetyltransferase (SpeG) from Escherichia coli.

Filippova EV, Weigand S, Kiryukhina O, Wolfe AJ, Anderson WF.

Acta Crystallogr D Struct Biol. 2019 Jun 1;75(Pt 6):545-553. doi: 10.1107/S2059798319006545. Epub 2019 May 28.


Controlling for Contaminants in Low-Biomass 16S rRNA Gene Sequencing Experiments.

Karstens L, Asquith M, Davin S, Fair D, Gregory WT, Wolfe AJ, Braun J, McWeeney S.

mSystems. 2019 Jun 4;4(4). pii: e00290-19. doi: 10.1128/mSystems.00290-19.


Implications of the Genitourinary Microbiota in Prostatic Disease.

Bajic P, Dornbier RA, Doshi CP, Wolfe AJ, Farooq AV, Bresler L.

Curr Urol Rep. 2019 May 18;20(7):34. doi: 10.1007/s11934-019-0904-6. Review.


Bacteriophages of the lower urinary tract.

Garretto A, Miller-Ensminger T, Wolfe AJ, Putonti C.

Nat Rev Urol. 2019 Jul;16(7):422-432. doi: 10.1038/s41585-019-0192-4. Review.


Female lower urinary tract microbiota do not associate with IC/PBS symptoms: a case-controlled study.

Bresler L, Price TK, Hilt EE, Joyce C, Fitzgerald CM, Wolfe AJ.

Int Urogynecol J. 2019 Nov;30(11):1835-1842. doi: 10.1007/s00192-019-03942-9. Epub 2019 Apr 16.


Mechanisms, Detection, and Relevance of Protein Acetylation in Prokaryotes.

Christensen DG, Baumgartner JT, Xie X, Jew KM, Basisty N, Schilling B, Kuhn ML, Wolfe AJ.

mBio. 2019 Apr 9;10(2). pii: e02708-18. doi: 10.1128/mBio.02708-18. Review.


Correction for Christensen et al., "Identification of Novel Protein Lysine Acetyltransferases in Escherichia coli".

Christensen DG, Meyer JG, Baumgartner JT, D'Souza AK, Nelson WC, Payne SH, Kuhn ML, Schilling B, Wolfe AJ.

mBio. 2019 Apr 9;10(2). pii: e00592-19. doi: 10.1128/mBio.00592-19. No abstract available.


Bladder urinary oxygen tension is correlated with urinary microbiota composition.

Shannon MB, Limeira R, Johansen D, Gao X, Lin H, Dong Q, Wolfe AJ, Mueller ER.

Int Urogynecol J. 2019 Aug;30(8):1261-1267. doi: 10.1007/s00192-019-03931-y. Epub 2019 Mar 27.


A Cross-sectional Pilot Cohort Study Comparing Standard Urine Collection to the Peezy Midstream Device for Research Studies Involving Women.

Southworth E, Hochstedler B, Price TK, Joyce C, Wolfe AJ, Mueller ER.

Female Pelvic Med Reconstr Surg. 2019 Mar/Apr;25(2):e28-e33. doi: 10.1097/SPV.0000000000000693.


Global Lysine Acetylation in Escherichia coli Results from Growth Conditions That Favor Acetate Fermentation.

Schilling B, Basisty N, Christensen DG, Sorensen D, Orr JS, Wolfe AJ, Rao CV.

J Bacteriol. 2019 Apr 9;201(9). pii: e00768-18. doi: 10.1128/JB.00768-18. Print 2019 May 1.


Old instillations and new implications for bladder cancer: the urinary microbiome and intravesical BCG.

Bajic P, Wolfe AJ, Gupta GN.

BJU Int. 2019 Jul;124(1):7-8. doi: 10.1111/bju.14683. Epub 2019 Feb 8. No abstract available.


The Urinary Microbiome: Implications in Bladder Cancer Pathogenesis and Therapeutics.

Bajic P, Wolfe AJ, Gupta GN.

Urology. 2019 Apr;126:10-15. doi: 10.1016/j.urology.2018.12.034. Epub 2019 Jan 4. Review.


The spermidine acetyltransferase SpeG regulates transcription of the small RNA rprA.

Hu LI, Filippova EV, Dang J, Pshenychnyi S, Ruan J, Kiryukhina O, Anderson WF, Kuhn ML, Wolfe AJ.

PLoS One. 2018 Dec 18;13(12):e0207563. doi: 10.1371/journal.pone.0207563. eCollection 2018.


Recombinant Manganese Peroxidase Reduces A2E Burden in Age-Related and Stargardt's Macular Degeneration Models.

Moody KJ, Tinklepaugh J, Obert E, Grohn K, DeRosa JR, Lumen E, Moyer BS, Campbell S, Wolfe AJ, Sleeper MB, Bianchi AH, Fisher C, Applegate J, Leary E, LeClair N, Wortel D, Doyle RP, Rohrer B, Blanden AR.

Rejuvenation Res. 2018 Dec;21(6):560-571. doi: 10.1089/rej.2018.2146.


Urobiome updates: advances in urinary microbiome research.

Wolfe AJ, Brubaker L.

Nat Rev Urol. 2019 Feb;16(2):73-74. doi: 10.1038/s41585-018-0127-5. No abstract available.


Identification of Novel Protein Lysine Acetyltransferases in Escherichia coli.

Christensen DG, Meyer JG, Baumgartner JT, D'Souza AK, Nelson WC, Payne SH, Kuhn ML, Schilling B, Wolfe AJ.

mBio. 2018 Oct 23;9(5). pii: e01905-18. doi: 10.1128/mBio.01905-18. Erratum in: mBio. 2019 Apr 9;10(2):.


Extracellular Acidic pH Inhibits Acetate Consumption by Decreasing Gene Transcription of the Tricarboxylic Acid Cycle and the Glyoxylate Shunt.

Orr JS, Christensen DG, Wolfe AJ, Rao CV.

J Bacteriol. 2018 Dec 20;201(2). pii: e00410-18. doi: 10.1128/JB.00410-18. Print 2019 Jan 15.


Sex differences in lower urinary tract biology and physiology.

Abelson B, Sun D, Que L, Nebel RA, Baker D, Popiel P, Amundsen CL, Chai T, Close C, DiSanto M, Fraser MO, Kielb SJ, Kuchel G, Mueller ER, Palmer MH, Parker-Autry C, Wolfe AJ, Damaser MS.

Biol Sex Differ. 2018 Oct 22;9(1):45. doi: 10.1186/s13293-018-0204-8. Review.


Urinary microbes and postoperative urinary tract infection risk in urogynecologic surgical patients.

Thomas-White KJ, Gao X, Lin H, Fok CS, Ghanayem K, Mueller ER, Dong Q, Brubaker L, Wolfe AJ.

Int Urogynecol J. 2018 Dec;29(12):1797-1805. doi: 10.1007/s00192-018-3767-3. Epub 2018 Sep 28.


Kinetics of Membrane Protein-Detergent Interactions Depend on Protein Electrostatics.

Wolfe AJ, Gugel JF, Chen M, Movileanu L.

J Phys Chem B. 2018 Oct 18;122(41):9471-9481. doi: 10.1021/acs.jpcb.8b07889. Epub 2018 Oct 5.


Male Bladder Microbiome Relates to Lower Urinary Tract Symptoms.

Bajic P, Van Kuiken ME, Burge BK, Kirshenbaum EJ, Joyce CJ, Wolfe AJ, Branch JD, Bresler L, Farooq AV.

Eur Urol Focus. 2018 Aug 21. pii: S2405-4569(18)30220-7. doi: 10.1016/j.euf.2018.08.001. [Epub ahead of print]


Urinary symptoms are associated with certain urinary microbes in urogynecologic surgical patients.

Fok CS, Gao X, Lin H, Thomas-White KJ, Mueller ER, Wolfe AJ, Dong Q, Brubaker L.

Int Urogynecol J. 2018 Dec;29(12):1765-1771. doi: 10.1007/s00192-018-3732-1. Epub 2018 Aug 16.


Detecting viral genomes in the female urinary microbiome.

Garretto A, Thomas-White K, Wolfe AJ, Putonti C.

J Gen Virol. 2018 Aug;99(8):1141-1146. doi: 10.1099/jgv.0.001097. Epub 2018 Jun 11.


RPtag as an Orally Bioavailable, Hyperstable Epitope Tag and Generalizable Protein Binding Scaffold.

DeRosa JR, Moyer BS, Lumen E, Wolfe AJ, Sleeper MB, Bianchi AH, Crawford A, McGuigan C, Wortel D, Fisher C, Moody KJ, Blanden AR.

Biochemistry. 2018 May 29;57(21):3036-3049. doi: 10.1021/acs.biochem.8b00170. Epub 2018 May 15.


Culturing of female bladder bacteria reveals an interconnected urogenital microbiota.

Thomas-White K, Forster SC, Kumar N, Van Kuiken M, Putonti C, Stares MD, Hilt EE, Price TK, Wolfe AJ, Lawley TD.

Nat Commun. 2018 Apr 19;9(1):1557. doi: 10.1038/s41467-018-03968-5.


Diversity of the midstream urine microbiome in adults with chronic kidney disease.

Kramer H, Kuffel G, Thomas-White K, Wolfe AJ, Vellanki K, Leehey DJ, Bansal VK, Brubaker L, Flanigan R, Koval J, Wadhwa A, Zilliox MJ.

Int Urol Nephrol. 2018 Jun;50(6):1123-1130. doi: 10.1007/s11255-018-1860-7. Epub 2018 Apr 12.


Detergent Desorption of Membrane Proteins Exhibits Two Kinetic Phases.

Wolfe AJ, Gugel JF, Chen M, Movileanu L.

J Phys Chem Lett. 2018 Apr 19;9(8):1913-1919. doi: 10.1021/acs.jpclett.8b00549. Epub 2018 Apr 2.


Transcriptome response of human skeletal muscle to divergent exercise stimuli.

Dickinson JM, D'Lugos AC, Naymik MA, Siniard AL, Wolfe AJ, Curtis DR, Huentelman MJ, Carroll CC.

J Appl Physiol (1985). 2018 Jun 1;124(6):1529-1540. doi: 10.1152/japplphysiol.00014.2018. Epub 2018 Mar 15.


Structural Basis for DNA Recognition by the Two-Component Response Regulator RcsB.

Filippova EV, Zemaitaitis B, Aung T, Wolfe AJ, Anderson WF.

mBio. 2018 Feb 27;9(1). pii: e01993-17. doi: 10.1128/mBio.01993-17.


Bacteriophages of the Urinary Microbiome.

Miller-Ensminger T, Garretto A, Brenner J, Thomas-White K, Zambom A, Wolfe AJ, Putonti C.

J Bacteriol. 2018 Mar 12;200(7). pii: e00738-17. doi: 10.1128/JB.00738-17. Print 2018 Apr 1.


Urine trouble: should we think differently about UTI?

Price TK, Hilt EE, Dune TJ, Mueller ER, Wolfe AJ, Brubaker L.

Int Urogynecol J. 2018 Feb;29(2):205-210. doi: 10.1007/s00192-017-3528-8. Epub 2017 Dec 26.


Ancient Regulatory Role of Lysine Acetylation in Central Metabolism.

Nakayasu ES, Burnet MC, Walukiewicz HE, Wilkins CS, Shukla AK, Brooks S, Plutz MJ, Lee BD, Schilling B, Wolfe AJ, Müller S, Kirby JR, Rao CV, Cort JR, Payne SH.

mBio. 2017 Nov 28;8(6). pii: e01894-17. doi: 10.1128/mBio.01894-17.


An acetylatable lysine controls CRP function in E. coli.

Davis R, Écija-Conesa A, Gallego-Jara J, de Diego T, Filippova EV, Kuffel G, Anderson WF, Gibson BW, Schilling B, Canovas M, Wolfe AJ.

Mol Microbiol. 2018 Jan;107(1):116-131. doi: 10.1111/mmi.13874. Epub 2017 Nov 23.


Quantification of Membrane Protein-Detergent Complex Interactions.

Wolfe AJ, Si W, Zhang Z, Blanden AR, Hsueh YC, Gugel JF, Pham B, Chen M, Loh SN, Rozovsky S, Aksimentiev A, Movileanu L.

J Phys Chem B. 2017 Nov 9;121(44):10228-10241. doi: 10.1021/acs.jpcb.7b08045. Epub 2017 Oct 31.


Microorganisms Identified in the Maternal Bladder: Discovery of the Maternal Bladder Microbiota.

Jacobs KM, Thomas-White KJ, Hilt EE, Wolfe AJ, Waters TP.

AJP Rep. 2017 Jul;7(3):e188-e196. doi: 10.1055/s-0037-1606860. Epub 2017 Sep 29.


Urinary Symptoms and Their Associations With Urinary Tract Infections in Urogynecologic Patients.

Dune TJ, Price TK, Hilt EE, Thomas-White KJ, Kliethermes S, Brincat C, Brubaker L, Schreckenberger P, Wolfe AJ, Mueller ER.

Obstet Gynecol. 2017 Oct;130(4):718-725. doi: 10.1097/AOG.0000000000002239.


Draft Genome Sequence of Staphylococcus epidermidis (Winslow and Winslow) Evans (ATCC 14990).

Putonti C, Kalesinskas L, Cudone E, Engelbrecht KC, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00619-17. doi: 10.1128/genomeA.00619-17.


Draft Genome Sequences of Two ATCC Staphylococcus aureus subsp. aureus Strains.

Putonti C, Kalesinskas L, Cudone E, Engelbrecht KC, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00618-17. doi: 10.1128/genomeA.00618-17.

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