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Items: 10

1.

Optimization of the standard genetic code in terms of two mutation types: Point mutations and frameshifts.

Wnętrzak M, Błażej P, Mackiewicz P.

Biosystems. 2019 Jul;181:44-50. doi: 10.1016/j.biosystems.2019.04.012. Epub 2019 Apr 28.

PMID:
31042561
2.

The influence of different types of translational inaccuracies on the genetic code structure.

BłaŻej P, Wnetrzak M, Mackiewicz D, Mackiewicz P.

BMC Bioinformatics. 2019 Mar 6;20(1):114. doi: 10.1186/s12859-019-2661-4.

3.

Many alternative and theoretical genetic codes are more robust to amino acid replacements than the standard genetic code.

Błażej P, Wnętrzak M, Mackiewicz D, Gagat P, Mackiewicz P.

J Theor Biol. 2019 Mar 7;464:21-32. doi: 10.1016/j.jtbi.2018.12.030. Epub 2018 Dec 21.

PMID:
30579955
4.

The optimality of the standard genetic code assessed by an eight-objective evolutionary algorithm.

Wnętrzak M, Błażej P, Mackiewicz D, Mackiewicz P.

BMC Evol Biol. 2018 Dec 13;18(1):192. doi: 10.1186/s12862-018-1304-0.

5.

Correction: Optimization of the standard genetic code according to three codon positions using an evolutionary algorithm.

Błażej P, Wnętrzak M, Mackiewicz D, Mackiewicz P.

PLoS One. 2018 Oct 4;13(10):e0205450. doi: 10.1371/journal.pone.0205450. eCollection 2018.

6.

Optimization of the standard genetic code according to three codon positions using an evolutionary algorithm.

Błażej P, Wnętrzak M, Mackiewicz D, Mackiewicz P.

PLoS One. 2018 Aug 9;13(8):e0201715. doi: 10.1371/journal.pone.0201715. eCollection 2018. Erratum in: PLoS One. 2018 Oct 4;13(10):e0205450.

7.

Optimization of amino acid replacement costs by mutational pressure in bacterial genomes.

Błażej P, Mackiewicz D, Grabińska M, Wnętrzak M, Mackiewicz P.

Sci Rep. 2017 Apr 21;7(1):1061. doi: 10.1038/s41598-017-01130-7.

8.

Representations of Search Spaces in the Problem of Mutational Pressure Optimization According to Protein-Coding Sequences.

Błażej P, Wnętrzak M, Grabińska M, Mackiewicz P.

J Comput Biol. 2017 Nov;24(11):1089-1098. doi: 10.1089/cmb.2017.0017. Epub 2017 Apr 17.

PMID:
28414521
9.

The Impact of Selection at the Amino Acid Level on the Usage of Synonymous Codons.

Błażej P, Mackiewicz D, Wnętrzak M, Mackiewicz P.

G3 (Bethesda). 2017 Mar 10;7(3):967-981. doi: 10.1534/g3.116.038125.

10.

The role of crossover operator in evolutionary-based approach to the problem of genetic code optimization.

Błażej P, Wnȩtrzak M, Mackiewicz P.

Biosystems. 2016 Dec;150:61-72. doi: 10.1016/j.biosystems.2016.08.008. Epub 2016 Aug 20.

PMID:
27555085

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