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Items: 1 to 50 of 90

1.

Local stress and pressure in an inhomogeneous system of spherical active Brownian particles.

Das S, Gompper G, Winkler RG.

Sci Rep. 2019 Apr 29;9(1):6608. doi: 10.1038/s41598-019-43077-x.

2.

Tethered Semiflexible Polymer under Large Amplitude Oscillatory Shear.

Lamura A, Winkler RG.

Polymers (Basel). 2019 Apr 23;11(4). pii: E737. doi: 10.3390/polym11040737.

3.

Active Brownian filaments with hydrodynamic interactions: conformations and dynamics.

Martín-Gómez A, Eisenstecken T, Gompper G, Winkler RG.

Soft Matter. 2019 May 15;15(19):3957-3969. doi: 10.1039/c9sm00391f.

PMID:
31012481
4.

Active Brownian Filamentous Polymers under Shear Flow.

Martín-Gómez A, Gompper G, Winkler RG.

Polymers (Basel). 2018 Jul 30;10(8). pii: E837. doi: 10.3390/polym10080837.

5.

Active Brownian ring polymers.

Mousavi SM, Gompper G, Winkler RG.

J Chem Phys. 2019 Feb 14;150(6):064913. doi: 10.1063/1.5082723.

PMID:
30769972
6.

Weak Shape Anisotropy Leads to a Nonmonotonic Contribution to Crowding, Impacting Protein Dynamics under Physiologically Relevant Conditions.

Myung JS, Roosen-Runge F, Winkler RG, Gompper G, Schurtenberger P, Stradner A.

J Phys Chem B. 2018 Dec 27;122(51):12396-12402. doi: 10.1021/acs.jpcb.8b07901. Epub 2018 Dec 13.

7.

Clustering of microswimmers: interplay of shape and hydrodynamics.

Theers M, Westphal E, Qi K, Winkler RG, Gompper G.

Soft Matter. 2018 Oct 31;14(42):8590-8603. doi: 10.1039/c8sm01390j.

PMID:
30339172
8.

Time-resolved structural evolution during the collapse of responsive hydrogels: The microgel-to-particle transition.

Keidel R, Ghavami A, Lugo DM, Lotze G, Virtanen O, Beumers P, Pedersen JS, Bardow A, Winkler RG, Richtering W.

Sci Adv. 2018 Apr 6;4(4):eaao7086. doi: 10.1126/sciadv.aao7086. eCollection 2018 Apr.

9.

Steady state sedimentation of ultrasoft colloids.

Singh SP, Gompper G, Winkler RG.

J Chem Phys. 2018 Feb 28;148(8):084901. doi: 10.1063/1.5001886.

PMID:
29495770
10.

Spatial correlations of hydrodynamic fluctuations in simple fluids under shear flow: A mesoscale simulation study.

Varghese A, Gompper G, Winkler RG.

Phys Rev E. 2017 Dec;96(6-1):062617. doi: 10.1103/PhysRevE.96.062617. Epub 2017 Dec 28.

PMID:
29347341
11.

Clustering and dynamics of particles in dispersions with competing interactions: theory and simulation.

Das S, Riest J, Winkler RG, Gompper G, Dhont JKG, Nägele G.

Soft Matter. 2017 Dec 20;14(1):92-103. doi: 10.1039/c7sm02019h.

PMID:
29199754
12.

Active turbulence in a gas of self-assembled spinners.

Kokot G, Das S, Winkler RG, Gompper G, Aranson IS, Snezhko A.

Proc Natl Acad Sci U S A. 2017 Dec 5;114(49):12870-12875. doi: 10.1073/pnas.1710188114. Epub 2017 Nov 20.

13.

Internal dynamics of semiflexible polymers with active noise.

Eisenstecken T, Gompper G, Winkler RG.

J Chem Phys. 2017 Apr 21;146(15):154903. doi: 10.1063/1.4981012.

PMID:
28433012
14.

Internal dynamics of microgels: A mesoscale hydrodynamic simulation study.

Ghavami A, Kobayashi H, Winkler RG.

J Chem Phys. 2016 Dec 28;145(24):244902. doi: 10.1063/1.4972893.

PMID:
28049314
15.

Polymer Conformations in Ionic Microgels in the Presence of Salt: Theoretical and Mesoscale Simulation Results.

Kobayashi H, Halver R, Sutmann G, Winkler RG.

Polymers (Basel). 2017 Jan 5;9(1). pii: E15. doi: 10.3390/polym9010015.

16.

Dramatic influence of patchy attractions on short-time protein diffusion under crowded conditions.

Bucciarelli S, Myung JS, Farago B, Das S, Vliegenthart GA, Holderer O, Winkler RG, Schurtenberger P, Gompper G, Stradner A.

Sci Adv. 2016 Dec 7;2(12):e1601432. eCollection 2016 Dec.

17.

Bacterial swarmer cells in confinement: a mesoscale hydrodynamic simulation study.

Eisenstecken T, Hu J, Winkler RG.

Soft Matter. 2016 Oct 12;12(40):8316-8326.

PMID:
27714355
18.

Modeling a spheroidal microswimmer and cooperative swimming in a narrow slit.

Theers M, Westphal E, Gompper G, Winkler RG.

Soft Matter. 2016 Sep 21;12(35):7372-85. doi: 10.1039/c6sm01424k. Epub 2016 Aug 16.

PMID:
27529776
19.

Conformational Properties of Active Semiflexible Polymers.

Eisenstecken T, Gompper G, Winkler RG.

Polymers (Basel). 2016 Aug 12;8(8). pii: E304. doi: 10.3390/polym8080304.

20.

From local to hydrodynamic friction in Brownian motion: A multiparticle collision dynamics simulation study.

Theers M, Westphal E, Gompper G, Winkler RG.

Phys Rev E. 2016 Mar;93(3):032604. doi: 10.1103/PhysRevE.93.032604. Epub 2016 Mar 8.

PMID:
27078411
21.

Dynamics of flexible active Brownian dumbbells in the absence and the presence of shear flow.

Winkler RG.

Soft Matter. 2016 Apr 20;12(16):3737-49. doi: 10.1039/c5sm02965a.

PMID:
26980630
22.

Universal conformational properties of polymers in ionic nanogels.

Kobayashi H, Winkler RG.

Sci Rep. 2016 Feb 1;6:19836. doi: 10.1038/srep19836.

23.

Self-organization in suspensions of end-functionalized semiflexible polymers under shear flow.

Myung JS, Winkler RG, Gompper G.

J Chem Phys. 2015 Dec 28;143(24):243117. doi: 10.1063/1.4933368. Erratum in: J Chem Phys. 2015 Nov 28;143(20):209901.

PMID:
26723602
24.

Hydrodynamic correlations in shear flow: Multiparticle-collision-dynamics simulation study.

Varghese A, Huang CC, Winkler RG, Gompper G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Nov;92(5):053002. doi: 10.1103/PhysRevE.92.053002. Epub 2015 Nov 2.

PMID:
26651774
25.

Publisher's Note: "Self-organization in suspensions of end-functionalized semiflexible polymers under shear flow" [J. Chem. Phys. 143, 243117 (2015)].

Myung JS, Winkler RG, Gompper G.

J Chem Phys. 2015 Nov 28;143(20):209901. doi: 10.1063/1.4936868. No abstract available.

PMID:
26627972
26.

Effect of angular momentum conservation on hydrodynamic simulations of colloids.

Yang M, Theers M, Hu J, Gompper G, Winkler RG, Ripoll M.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jul;92(1):013301. Epub 2015 Jul 2.

PMID:
26274301
27.

Conformations, hydrodynamic interactions, and instabilities of sedimenting semiflexible filaments.

Saggiorato G, Elgeti J, Winkler RG, Gompper G.

Soft Matter. 2015 Oct 7;11(37):7337-44. doi: 10.1039/c5sm01069a. Epub 2015 Aug 13.

PMID:
26270609
28.

Modelling the mechanics and hydrodynamics of swimming E. coli.

Hu J, Yang M, Gompper G, Winkler RG.

Soft Matter. 2015 Oct 28;11(40):7867-76. doi: 10.1039/c5sm01678a. Epub 2015 Aug 10.

PMID:
26256240
29.

Virial pressure in systems of spherical active Brownian particles.

Winkler RG, Wysocki A, Gompper G.

Soft Matter. 2015 Sep 7;11(33):6680-91. doi: 10.1039/c5sm01412c.

PMID:
26221908
30.

Physical Sensing of Surface Properties by Microswimmers--Directing Bacterial Motion via Wall Slip.

Hu J, Wysocki A, Winkler RG, Gompper G.

Sci Rep. 2015 May 20;5:9586. doi: 10.1038/srep09586.

31.

Physics of microswimmers--single particle motion and collective behavior: a review.

Elgeti J, Winkler RG, Gompper G.

Rep Prog Phys. 2015 May;78(5):056601. doi: 10.1088/0034-4885/78/5/056601. Epub 2015 Apr 28. Review.

PMID:
25919479
32.

Bulk viscosity of multiparticle collision dynamics fluids.

Theers M, Winkler RG.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Mar;91(3):033309. Epub 2015 Mar 26.

PMID:
25871248
33.

Thermostat for nonequilibrium multiparticle-collision-dynamics simulations.

Huang CC, Varghese A, Gompper G, Winkler RG.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jan;91(1):013310. Epub 2015 Jan 28.

PMID:
25679742
34.

Conformational state distributions and catalytically relevant dynamics of a hinge-bending enzyme studied by single-molecule FRET and a coarse-grained simulation.

Gabba M, Poblete S, Rosenkranz T, Katranidis A, Kempe D, Züchner T, Winkler RG, Gompper G, Fitter J.

Biophys J. 2014 Oct 21;107(8):1913-1923. doi: 10.1016/j.bpj.2014.08.016.

35.

Hydrodynamics of discrete-particle models of spherical colloids: a multiparticle collision dynamics simulation study.

Poblete S, Wysocki A, Gompper G, Winkler RG.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Sep;90(3):033314. Epub 2014 Sep 29.

PMID:
25314571
36.

Hydrodynamic correlations and diffusion coefficient of star polymers in solution.

Singh SP, Huang CC, Westphal E, Gompper G, Winkler RG.

J Chem Phys. 2014 Aug 28;141(8):084901. doi: 10.1063/1.4893766.

PMID:
25173039
37.

Structure and dynamics of a compact state of a multidomain protein, the mercuric ion reductase.

Hong L, Sharp MA, Poblete S, Biehl R, Zamponi M, Szekely N, Appavou MS, Winkler RG, Nauss RE, Johs A, Parks JM, Yi Z, Cheng X, Liang L, Ohl M, Miller SM, Richter D, Gompper G, Smith JC.

Biophys J. 2014 Jul 15;107(2):393-400. doi: 10.1016/j.bpj.2014.06.013.

39.

Synchronization of rigid microrotors by time-dependent hydrodynamic interactions.

Theers M, Winkler RG.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Aug;88(2):023012. Epub 2013 Aug 13.

PMID:
24032929
40.

Synchronization, slippage, and unbundling of driven helical flagella.

Reigh SY, Winkler RG, Gompper G.

PLoS One. 2013 Aug 19;8(8):e70868. doi: 10.1371/journal.pone.0070868. eCollection 2013.

41.

Effect of hydrodynamic correlations on the dynamics of polymers in dilute solution.

Huang CC, Gompper G, Winkler RG.

J Chem Phys. 2013 Apr 14;138(14):144902. doi: 10.1063/1.4799877.

PMID:
24981544
42.

Multiparticle collision dynamics simulations of viscoelastic fluids: shear-thinning Gaussian dumbbells.

Kowalik B, Winkler RG.

J Chem Phys. 2013 Mar 14;138(10):104903. doi: 10.1063/1.4792196.

PMID:
23514515
43.

Hydrodynamic mechanisms of spinodal decomposition in confined colloid-polymer mixtures: a multiparticle collision dynamics study.

Winkler A, Virnau P, Binder K, Winkler RG, Gompper G.

J Chem Phys. 2013 Feb 7;138(5):054901. doi: 10.1063/1.4789267.

PMID:
23406143
44.

Semiflexible polymers under external fields confined to two dimensions.

Lamura A, Winkler RG.

J Chem Phys. 2012 Dec 28;137(24):244909. doi: 10.1063/1.4772748.

PMID:
23277958
45.

Flow-induced helical coiling of semiflexible polymers in structured microchannels.

Chelakkot R, Winkler RG, Gompper G.

Phys Rev Lett. 2012 Oct 26;109(17):178101. Epub 2012 Oct 23.

PMID:
23215225
46.

Hydrodynamic correlations in multiparticle collision dynamics fluids.

Huang CC, Gompper G, Winkler RG.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Nov;86(5 Pt 2):056711. Epub 2012 Nov 27.

PMID:
23214910
47.

Conformational and dynamical properties of ultra-soft colloids in semi-dilute solutions under shear flow.

Singh SP, Fedosov DA, Chatterji A, Winkler RG, Gompper G.

J Phys Condens Matter. 2012 Nov 21;24(46):464103. doi: 10.1088/0953-8984/24/46/464103. Epub 2012 Oct 31.

PMID:
23114112
48.

Polyelectrolyte adsorption onto oppositely charged interfaces: image-charge repulsion and surface curvature.

Cherstvy AG, Winkler RG.

J Phys Chem B. 2012 Aug 16;116(32):9838-45. doi: 10.1021/jp304980e. Epub 2012 Aug 2.

PMID:
22794191
49.

Non-equilibrium relaxation and tumbling times of polymers in semidilute solution.

Huang CC, Gompper G, Winkler RG.

J Phys Condens Matter. 2012 Jul 18;24(28):284131. doi: 10.1088/0953-8984/24/28/284131. Epub 2012 Jun 27.

PMID:
22739124
50.

Nonequilibrium forces between dragged ultrasoft colloids.

Singh SP, Winkler RG, Gompper G.

Phys Rev Lett. 2011 Oct 7;107(15):158301. Epub 2011 Oct 6.

PMID:
22107322

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