Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 90

1.

Assessment of eight nucleic acid amplification technologies for potential use to detect infectious agents in low-resource settings.

Cantera JL, White H, Diaz MH, Beall SG, Winchell JM, Lillis L, Kalnoky M, Gallarda J, Boyle DS.

PLoS One. 2019 Apr 22;14(4):e0215756. doi: 10.1371/journal.pone.0215756. eCollection 2019.

2.

Performance and workflow assessment of six nucleic acid extraction technologies for use in resource limited settings.

Beall SG, Cantera J, Diaz MH, Winchell JM, Lillis L, White H, Kalnoky M, Gallarda J, Boyle DS.

PLoS One. 2019 Apr 18;14(4):e0215753. doi: 10.1371/journal.pone.0215753. eCollection 2019.

3.

Surveillance for incidence and etiology of early-onset neonatal sepsis in Soweto, South Africa.

Velaphi SC, Westercamp M, Moleleki M, Pondo T, Dangor Z, Wolter N, von Gottberg A, Shang N, Demirjian A, Winchell JM, Diaz MH, Nakwa F, Okudo G, Wadula J, Cutland C, Schrag SJ, Madhi SA.

PLoS One. 2019 Apr 10;14(4):e0214077. doi: 10.1371/journal.pone.0214077. eCollection 2019.

4.

Culture of Clinical Specimens Reveals Extensive Diversity of Legionella pneumophila Strains in Arizona.

Raphael BH, Huynh T, Brown E, Smith JC, Ruberto I, Getsinger L, White S, Winchell JM.

mSphere. 2019 Feb 27;4(1). pii: e00649-18. doi: 10.1128/mSphere.00649-18.

5.

Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1.

Mercante JW, Caravas JA, Ishaq MK, Kozak-Muiznieks NA, Raphael BH, Winchell JM.

PLoS One. 2018 Oct 18;13(10):e0206110. doi: 10.1371/journal.pone.0206110. eCollection 2018.

6.

Causes and incidence of community-acquired serious infections among young children in south Asia (ANISA): an observational cohort study.

Saha SK, Schrag SJ, El Arifeen S, Mullany LC, Shahidul Islam M, Shang N, Qazi SA, Zaidi AKM, Bhutta ZA, Bose A, Panigrahi P, Soofi SB, Connor NE, Mitra DK, Isaac R, Winchell JM, Arvay ML, Islam M, Shafiq Y, Nisar I, Baloch B, Kabir F, Ali M, Diaz MH, Satpathy R, Nanda P, Padhi BK, Parida S, Hotwani A, Hasanuzzaman M, Ahmed S, Belal Hossain M, Ariff S, Ahmed I, Ibne Moin SM, Mahmud A, Waller JL, Rafiqullah I, Quaiyum MA, Begum N, Balaji V, Halen J, Nawshad Uddin Ahmed ASM, Weber MW, Hamer DH, Hibberd PL, Sadeq-Ur Rahman Q, Mogan VR, Hossain T, McGee L, Anandan S, Liu A, Panigrahi K, Abraham AM, Baqui AH.

Lancet. 2018 Jul 14;392(10142):145-159. doi: 10.1016/S0140-6736(18)31127-9. Epub 2018 Jul 6.

7.

Mycoplasma pneumoniae Among Children Hospitalized With Community-acquired Pneumonia.

Kutty PK, Jain S, Taylor TH, Bramley AM, Diaz MH, Ampofo K, Arnold SR, Williams DJ, Edwards KM, McCullers JA, Pavia AT, Winchell JM, Schrag SJ, Hicks LA.

Clin Infect Dis. 2019 Jan 1;68(1):5-12. doi: 10.1093/cid/ciy419.

8.

Epidemiology and Molecular Identification and Characterization of Mycoplasma pneumoniae, South Africa, 2012-2015.

Carrim M, Wolter N, Benitez AJ, Tempia S, du Plessis M, Walaza S, Moosa F, Diaz MH, Wolff BJ, Treurnicht FK, Hellferscee O, Dawood H, Variava E, Cohen C, Winchell JM, von Gottberg A.

Emerg Infect Dis. 2018 Mar;24(3):506-513. doi: 10.3201/eid2403.162052.

9.

Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies.

Kozak-Muiznieks NA, Morrison SS, Mercante JW, Ishaq MK, Johnson T, Caravas J, Lucas CE, Brown E, Raphael BH, Winchell JM.

Infect Genet Evol. 2018 Apr;59:172-185. doi: 10.1016/j.meegid.2018.02.008. Epub 2018 Feb 7.

PMID:
29427765
10.

Development of a multiplex TaqMan real-time PCR assay for the detection of Chlamydia psittaci and Chlamydia pneumoniae in human clinical specimens.

Wolff BJ, Morrison SS, Winchell JM.

Diagn Microbiol Infect Dis. 2018 Mar;90(3):167-170. doi: 10.1016/j.diagmicrobio.2017.11.014. Epub 2017 Nov 27.

PMID:
29291900
11.

Distribution of Legionella and bacterial community composition among regionally diverse US cooling towers.

Llewellyn AC, Lucas CE, Roberts SE, Brown EW, Nayak BS, Raphael BH, Winchell JM.

PLoS One. 2017 Dec 20;12(12):e0189937. doi: 10.1371/journal.pone.0189937. eCollection 2017.

12.

Rapid Laboratory Identification of Neisseria meningitidis Serogroup C as the Cause of an Outbreak - Liberia, 2017.

Patel JC, George J, Vuong J, Potts CC, Bozio C, Clark TA, Thomas J, Schier J, Chang A, Waller JL, Diaz MH, Whaley M, Jenkins LT, Fuller S, Williams DE, Redd JT, Arthur RR, Taweh F, Vera Walker Y, Hardy P, Freeman M, Katawera V, Gwesa G, Gbanya MZ, Clement P, Kohar H, Stone M, Fallah M, Nyenswah T, Winchell JM, Wang X, McNamara LA, Dokubo EK, Fox LM.

MMWR Morb Mortal Wkly Rep. 2017 Oct 27;66(42):1144-1147. doi: 10.15585/mmwr.mm6642a5. Erratum in: MMWR Morb Mortal Wkly Rep. 2017 Nov 17;66(45):1262.

13.

Correction: Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants.

Diaz MH, Desai HP, Morrison SS, Benitez AJ, Wolff BJ, Caravas J, Read TD, Dean D, Winchell JM.

PLoS One. 2017 Oct 4;12(10):e0186030. doi: 10.1371/journal.pone.0186030. eCollection 2017.

14.

Mycoplasma hominis Infections Transmitted Through Amniotic Tissue Product.

Novosad SA, Basavaraju SV, Annambhotla P, Mohr M, Halpin AL, Foy L, Chmielewski R, Winchell JM, Benitez AJ, Morrison SS, Johnson T, Crabb DM, Ratliff AE, Waites K, Kuehnert MJ.

Clin Infect Dis. 2017 Oct 1;65(7):1152-1158. doi: 10.1093/cid/cix507.

PMID:
28575162
15.

Molecular Characterization of Mycoplasma pneumoniae Infections in Two Rural Populations of Thailand from 2009 to 2012.

Whistler T, Sawatwong P, Diaz MH, Benitez AJ, Wolff BJ, Sapchookul P, Thamthitiwat S, Winchell JM.

J Clin Microbiol. 2017 Jul;55(7):2222-2233. doi: 10.1128/JCM.00350-17. Epub 2017 May 10.

16.

Influence of Antibiotics on the Detection of Bacteria by Culture-Based and Culture-Independent Diagnostic Tests in Patients Hospitalized With Community-Acquired Pneumonia.

Harris AM, Bramley AM, Jain S, Arnold SR, Ampofo K, Self WH, Williams DJ, Anderson EJ, Grijalva CG, McCullers JA, Pavia AT, Wunderink RG, Edwards KM, Winchell JM, Hicks LA.

Open Forum Infect Dis. 2017 Feb 10;4(1):ofx014. doi: 10.1093/ofid/ofx014. eCollection 2017 Winter.

17.

Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants.

Diaz MH, Desai HP, Morrison SS, Benitez AJ, Wolff BJ, Caravas J, Read TD, Dean D, Winchell JM.

PLoS One. 2017 Apr 14;12(4):e0174701. doi: 10.1371/journal.pone.0174701. eCollection 2017. Erratum in: PLoS One. 2017 Oct 4;12 (10 ):e0186030.

18.

Multi-center evaluation of one commercial and 12 in-house real-time PCR assays for detection of Mycoplasma pneumoniae.

Dumke R, Benitez AJ, Chalker V, Gullsby K, Henrich B, Hidalgo-Grass C, Hoogenboezem T, Kese D, Loens K, Maaskant J, Michael-Gayego A, Moses AE, Nir-Paz R, Pas SD, Pereyre S, Petersen RF, Rosenblatt M, van Rossum AMC, Uldum SA, Unger WWJ, Ursi D, Winchell JM, Bebear C; ESCMID Study Group for Mycoplasma Infections.

Diagn Microbiol Infect Dis. 2017 Jun;88(2):111-114. doi: 10.1016/j.diagmicrobio.2017.03.004. Epub 2017 Mar 8.

PMID:
28318608
19.

Complete Genome Sequence of Mycoplasma pneumoniae Type 2 Reference Strain FH Using Single-Molecule Real-Time Sequencing Technology.

Desai HP, Morrison SS, Diaz MH, Benitez AJ, Wolff BJ, Winchell JM.

Genome Announc. 2017 Feb 23;5(8). pii: e01629-16. doi: 10.1128/genomeA.01629-16.

20.

Complete Genome Sequences of Legionella pneumophila subsp. fraseri Strains Detroit-1 and Dallas 1E.

Raphael BH, Kozak-Muiznieks NA, Morrison SS, Mercante JW, Winchell JM.

Genome Announc. 2017 Feb 2;5(5). pii: e01525-16. doi: 10.1128/genomeA.01525-16.

21.

Epidemiology and Molecular Characteristics of Mycoplasma pneumoniae During an Outbreak of M. pneumoniae-associated Stevens-Johnson Syndrome.

Watkins LKF, Olson D, Diaz MH, Lin X, Demirjian A, Benitez AJ, Winchell JM, Robinson CC, Bol KA, Glodé MP, Dominguez SR, Miller LA, Kutty PK.

Pediatr Infect Dis J. 2017 Jun;36(6):564-571. doi: 10.1097/INF.0000000000001476.

22.

Development of a multiplex taqMan real-time PCR assay for typing of Mycoplasma pneumoniae based on type-specific indels identified through whole genome sequencing.

Wolff BJ, Benitez AJ, Desai HP, Morrison SS, Diaz MH, Winchell JM.

Diagn Microbiol Infect Dis. 2017 Mar;87(3):203-206. doi: 10.1016/j.diagmicrobio.2016.11.013. Epub 2016 Nov 25.

PMID:
27923522
23.

Improved Detection of Respiratory Pathogens by Use of High-Quality Sputum with TaqMan Array Card Technology.

Wolff BJ, Bramley AM, Thurman KA, Whitney CG, Whitaker B, Self WH, Arnold SR, Trabue C, Wunderink RG, McCullers J, Edwards KM, Jain S, Winchell JM.

J Clin Microbiol. 2016 Dec 28;55(1):110-121. doi: 10.1128/JCM.01805-16. Print 2017 Jan.

24.

Ability of device to collect bacteria from cough aerosols generated by adults with cystic fibrosis.

Ku DN, Ku SK, Helfman B, McCarty NA, Wolff BJ, Winchell JM, Anderson LJ.

F1000Res. 2016 Aug 5;5:1920. eCollection 2016.

25.

Genomic Analysis Reveals Novel Diversity among the 1976 Philadelphia Legionnaires' Disease Outbreak Isolates and Additional ST36 Strains.

Mercante JW, Morrison SS, Desai HP, Raphael BH, Winchell JM.

PLoS One. 2016 Sep 29;11(9):e0164074. doi: 10.1371/journal.pone.0164074. eCollection 2016.

26.

Complete Genome Sequences of the Historical Legionella pneumophila Strains OLDA and Pontiac.

Mercante JW, Morrison SS, Raphael BH, Winchell JM.

Genome Announc. 2016 Aug 25;4(4). pii: e00866-16. doi: 10.1128/genomeA.00866-16.

27.

Complete Genome Sequences of Three Outbreak-Associated Legionella pneumophila Isolates.

Morrison SS, Desai HP, Mercante JW, Lapierre P, Raphael BH, Musser K, Winchell JM.

Genome Announc. 2016 Jul 21;4(4). pii: e00696-16. doi: 10.1128/genomeA.00696-16.

28.

Identification of Bacterial and Viral Codetections With Mycoplasma pneumoniae Using the TaqMan Array Card in Patients Hospitalized With Community-Acquired Pneumonia.

Diaz MH, Cross KE, Benitez AJ, Hicks LA, Kutty P, Bramley AM, Chappell JD, Hymas W, Patel A, Qi C, Williams DJ, Arnold SR, Ampofo K, Self WH, Grijalva CG, Anderson EJ, McCullers JA, Pavia AT, Wunderink RG, Edwards KM, Jain S, Winchell JM.

Open Forum Infect Dis. 2016 Mar 30;3(2):ofw071. doi: 10.1093/ofid/ofw071. eCollection 2016 Mar.

29.

Three Genome Sequences of Legionella pneumophila subsp. pascullei Associated with Colonization of a Health Care Facility.

Kozak-Muiznieks NA, Morrison SS, Sammons S, Rowe LA, Sheth M, Frace M, Lucas CE, Loparev VN, Raphael BH, Winchell JM.

Genome Announc. 2016 May 5;4(3). pii: e00335-16. doi: 10.1128/genomeA.00335-16.

30.

Simultaneous detection of Legionella species and L. anisa, L. bozemanii, L. longbeachae and L. micdadei using conserved primers and multiple probes in a multiplex real-time PCR assay.

Cross KE, Mercante JW, Benitez AJ, Brown EW, Diaz MH, Winchell JM.

Diagn Microbiol Infect Dis. 2016 Jul;85(3):295-301. doi: 10.1016/j.diagmicrobio.2016.03.022. Epub 2016 Apr 2.

31.

Laboratory Methods for Determining Etiology of Neonatal Infection at Population-based Sites in South Asia: The ANISA Study.

Saha SK, Islam MS, Qureshi SM, Hossain B, Islam M, Zaidi AK, Modak JK, Al-Emran HM, Diaz MH, McGee L, Winchell JM; ANISA Methods Group.

Pediatr Infect Dis J. 2016 May;35(5 Suppl 1):S16-22. doi: 10.1097/INF.0000000000001101.

PMID:
27070058
32.

Genomic Resolution of Outbreak-Associated Legionella pneumophila Serogroup 1 Isolates from New York State.

Raphael BH, Baker DJ, Nazarian E, Lapierre P, Bopp D, Kozak-Muiznieks NA, Morrison SS, Lucas CE, Mercante JW, Musser KA, Winchell JM.

Appl Environ Microbiol. 2016 May 31;82(12):3582-3590. doi: 10.1128/AEM.00362-16. Print 2016 Jun 15.

33.

The Evolution of Advanced Molecular Diagnostics for the Detection and Characterization of Mycoplasma pneumoniae.

Diaz MH, Winchell JM.

Front Microbiol. 2016 Mar 8;7:232. doi: 10.3389/fmicb.2016.00232. eCollection 2016. Review.

34.

Multistate Outbreak of Respiratory Infections Among Unaccompanied Children, June 2014-July 2014.

Tomczyk S, Arriola CS, Beall B, Benitez A, Benoit SR, Berman L, Bresee J, da Gloria Carvalho M, Cohn A, Cross K, Diaz MH, Francois Watkins LK, Gierke R, Hagan JE, Harris AM, Jain S, Kim L, Kobayashi M, Lindstrom S, McGee L, McMorrow M, Metcalf BL, Moore MR, Moura I, Nix WA, Nyangoma E, Oberste MS, Olsen SJ, Pimenta F, Socias C, Thurman K, Waller J, Waterman SH, Westercamp M, Wharton M, Whitney CG, Winchell JM, Wolff B, Kim C.

Clin Infect Dis. 2016 Jul 1;63(1):48-56. doi: 10.1093/cid/ciw147. Epub 2016 Mar 21.

PMID:
27001799
35.

Rapid detection and typing of pathogenic nonpneumophila Legionella spp. isolates using a multiplex real-time PCR assay.

Benitez AJ, Winchell JM.

Diagn Microbiol Infect Dis. 2016 Apr;84(4):298-303. doi: 10.1016/j.diagmicrobio.2016.01.007. Epub 2016 Jan 12.

PMID:
26867966
36.

Legionnaires' Disease in South Africa, 2012-2014.

Wolter N, Carrim M, Cohen C, Tempia S, Walaza S, Sahr P, de Gouveia L, Treurnicht F, Hellferscee O, Cohen AL, Benitez AJ, Dawood H, Variava E, Winchell JM, von Gottberg A.

Emerg Infect Dis. 2016 Jan;22(1):131-3. doi: 10.3201/eid2201.150972.

37.

Comparative analytical evaluation of the respiratory TaqMan Array Card with real-time PCR and commercial multi-pathogen assays.

Harvey JJ, Chester S, Burke SA, Ansbro M, Aden T, Gose R, Sciulli R, Bai J, DesJardin L, Benfer JL, Hall J, Smole S, Doan K, Popowich MD, St George K, Quinlan T, Halse TA, Li Z, Pérez-Osorio AC, Glover WA, Russell D, Reisdorf E, Whyte T Jr, Whitaker B, Hatcher C, Srinivasan V, Tatti K, Tondella ML, Wang X, Winchell JM, Mayer LW, Jernigan D, Mawle AC.

J Virol Methods. 2016 Feb;228:151-7. doi: 10.1016/j.jviromet.2015.11.020. Epub 2015 Nov 27.

PMID:
26640122
38.

Molecular Detection and Characterization of Mycoplasma pneumoniae Among Patients Hospitalized With Community-Acquired Pneumonia in the United States.

Diaz MH, Benitez AJ, Cross KE, Hicks LA, Kutty P, Bramley AM, Chappell JD, Hymas W, Patel A, Qi C, Williams DJ, Arnold SR, Ampofo K, Self WH, Grijalva CG, Anderson EJ, McCullers JA, Pavia AT, Wunderink RG, Edwards KM, Jain S, Winchell JM.

Open Forum Infect Dis. 2015 Jul 16;2(3):ofv106. doi: 10.1093/ofid/ofv106. eCollection 2015 Sep.

39.

Outbreak of Mycoplasma pneumoniae-Associated Stevens-Johnson Syndrome.

Olson D, Watkins LK, Demirjian A, Lin X, Robinson CC, Pretty K, Benitez AJ, Winchell JM, Diaz MH, Miller LA, Foo TA, Mason MD, Lauper UL, Kupfer O, Kennedy J, Glodé MP, Kutty PK, Dominguez SR.

Pediatrics. 2015 Aug;136(2):e386-94. doi: 10.1542/peds.2015-0278. Erratum in: Pediatrics. 2015 Dec;136(6):1198.

40.

Isothermal Detection of Mycoplasma pneumoniae Directly from Respiratory Clinical Specimens.

Petrone BL, Wolff BJ, DeLaney AA, Diaz MH, Winchell JM.

J Clin Microbiol. 2015 Sep;53(9):2970-6. doi: 10.1128/JCM.01431-15. Epub 2015 Jul 15.

41.

Community-Acquired Pneumonia Requiring Hospitalization among U.S. Adults.

Jain S, Self WH, Wunderink RG, Fakhran S, Balk R, Bramley AM, Reed C, Grijalva CG, Anderson EJ, Courtney DM, Chappell JD, Qi C, Hart EM, Carroll F, Trabue C, Donnelly HK, Williams DJ, Zhu Y, Arnold SR, Ampofo K, Waterer GW, Levine M, Lindstrom S, Winchell JM, Katz JM, Erdman D, Schneider E, Hicks LA, McCullers JA, Pavia AT, Edwards KM, Finelli L; CDC EPIC Study Team.

N Engl J Med. 2015 Jul 30;373(5):415-27. doi: 10.1056/NEJMoa1500245. Epub 2015 Jul 14.

42.

Specificity and Strain-Typing Capabilities of Nanorod Array-Surface Enhanced Raman Spectroscopy for Mycoplasma pneumoniae Detection.

Henderson KC, Benitez AJ, Ratliff AE, Crabb DM, Sheppard ES, Winchell JM, Dluhy RA, Waites KB, Atkinson TP, Krause DC.

PLoS One. 2015 Jun 29;10(6):e0131831. doi: 10.1371/journal.pone.0131831. eCollection 2015.

43.

Chlamydia psittaci comparative genomics reveals intraspecies variations in the putative outer membrane and type III secretion system genes.

Wolff BJ, Morrison SS, Pesti D, Ganakammal SR, Srinivasamoorthy G, Changayil S, Weil MR, MacCannell D, Rowe L, Frace M, Ritchie BW, Dean D, Winchell JM.

Microbiology. 2015 Jul;161(7):1378-91. doi: 10.1099/mic.0.000097. Epub 2015 Apr 17.

44.

Mycoplasma pneumoniae outbreak in a long-term care facility--Nebraska, 2014.

Hastings DL, Harrington KJ, Kutty PK, Rayman RJ, Spindola D, Diaz MH, Thurman KA, Winchell JM, Safranek TJ; Centers for Disease Control and Prevention (CDC).

MMWR Morb Mortal Wkly Rep. 2015 Mar 27;64(11):296-9.

45.

Community-acquired pneumonia requiring hospitalization among U.S. children.

Jain S, Williams DJ, Arnold SR, Ampofo K, Bramley AM, Reed C, Stockmann C, Anderson EJ, Grijalva CG, Self WH, Zhu Y, Patel A, Hymas W, Chappell JD, Kaufman RA, Kan JH, Dansie D, Lenny N, Hillyard DR, Haynes LM, Levine M, Lindstrom S, Winchell JM, Katz JM, Erdman D, Schneider E, Hicks LA, Wunderink RG, Edwards KM, Pavia AT, McCullers JA, Finelli L; CDC EPIC Study Team.

N Engl J Med. 2015 Feb 26;372(9):835-45. doi: 10.1056/NEJMoa1405870.

46.

Draft Genome Sequence of Legionella pneumophila D-5864, a Serogroup 6 Strain.

Morrison SS, Kozak-Muiznieks NA, Sammons S, Rowe LA, Frace M, Winchell JM.

Genome Announc. 2015 Jan 8;3(1). pii: e01379-14. doi: 10.1128/genomeA.01379-14.

47.

Current and emerging Legionella diagnostics for laboratory and outbreak investigations.

Mercante JW, Winchell JM.

Clin Microbiol Rev. 2015 Jan;28(1):95-133. doi: 10.1128/CMR.00029-14. Review.

48.

Investigations of Mycoplasma pneumoniae infections in the United States: trends in molecular typing and macrolide resistance from 2006 to 2013.

Diaz MH, Benitez AJ, Winchell JM.

J Clin Microbiol. 2015 Jan;53(1):124-30. doi: 10.1128/JCM.02597-14. Epub 2014 Oct 29.

49.

The multivariate detection limit for Mycoplasma pneumoniae as determined by nanorod array-surface enhanced Raman spectroscopy and comparison with limit of detection by qPCR.

Henderson KC, Sheppard ES, Rivera-Betancourt OE, Choi JY, Dluhy RA, Thurman KA, Winchell JM, Krause DC.

Analyst. 2014 Dec 21;139(24):6426-34. doi: 10.1039/c4an01141d.

50.

Notes from the field: atypical pneumonia in three members of an extended family - South Carolina and north Carolina, july-august 2013.

Rhea SK, Cox SW, Moore ZS, Mays ER, Benitez AJ, Diaz MH, Winchell JM; Centers for Disease Control and Prevention (CDC).

MMWR Morb Mortal Wkly Rep. 2014 Aug 22;63(33):734-5.

Supplemental Content

Loading ...
Support Center