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Benchmarking two Saccharomyces cerevisiae laboratory strains for growth and transcriptional response to methanol.

Espinosa MI, Williams TC, Pretorius IS, Paulsen IT.

Synth Syst Biotechnol. 2019 Oct 16;4(4):180-188. doi: 10.1016/j.synbio.2019.10.001. eCollection 2019 Dec.


Calcicole behaviour of Callisthene fasciculata Mart., an Al-accumulating species from the Brazilian Cerrado.

de Souza MC, Williams TCR, Poschenrieder C, Jansen S, Pinheiro MHO, Soares IP, Franco AC.

Plant Biol (Stuttg). 2020 Jan;22(1):30-37. doi: 10.1111/plb.13036. Epub 2019 Aug 30.


Contrasting Effects of Wild Arachis Dehydrin Under Abiotic and Biotic Stresses.

Mota APZ, Oliveira TN, Vinson CC, Williams TCR, Costa MMDC, Araujo ACG, Danchin EGJ, Grossi-de-Sá MF, Guimaraes PM, Brasileiro ACM.

Front Plant Sci. 2019 Apr 18;10:497. doi: 10.3389/fpls.2019.00497. eCollection 2019.


Evolutionary engineering in Saccharomyces cerevisiae reveals a TRK1-dependent potassium influx mechanism for propionic acid tolerance.

Xu X, Williams TC, Divne C, Pretorius IS, Paulsen IT.

Biotechnol Biofuels. 2019 Apr 23;12:97. doi: 10.1186/s13068-019-1427-6. eCollection 2019.


Preterm birth in evolutionary context: a predictive adaptive response?

Williams TC, Drake AJ.

Philos Trans R Soc Lond B Biol Sci. 2019 Apr 15;374(1770):20180121. doi: 10.1098/rstb.2018.0121.


Conserved Microbial Toxicity Responses for Acute and Chronic Silver Nanoparticle Treatments in Wetland Mesocosms.

Ward CS, Pan JF, Colman BP, Wang Z, Gwin CA, Williams TC, Ardis A, Gunsch CK, Hunt DE.

Environ Sci Technol. 2019 Mar 19;53(6):3268-3276. doi: 10.1021/acs.est.8b06654. Epub 2019 Feb 28.


Antigenic and sequence variability of the human respiratory syncytial virus F glycoprotein compared to related viruses in a comprehensive dataset.

Mas V, Nair H, Campbell H, Melero JA, Williams TC.

Vaccine. 2018 Oct 29;36(45):6660-6673. doi: 10.1016/j.vaccine.2018.09.056. Epub 2018 Oct 3.


Label-free quantitative proteomics of rat hypothalamus under fever induced by LPS and PGE2.

Firmino M, Weis SN, Souza JMF, Gomes BRB, Mól AR, Mortari MR, Souza GEP, Coca GC, Williams TCR, Fontes W, Ricart CAO, de Sousa MV, Veiga-Souza FH.

J Proteomics. 2018 Sep 15;187:182-199. doi: 10.1016/j.jprot.2018.07.018. Epub 2018 Jul 27.


Blueprints for Biosensors: Design, Limitations, and Applications.

Carpenter AC, Paulsen IT, Williams TC.

Genes (Basel). 2018 Jul 26;9(8). pii: E375. doi: 10.3390/genes9080375. Review.


The Multiplanetary Future of Plant Synthetic Biology.

Llorente B, Williams TC, Goold HD.

Genes (Basel). 2018 Jul 10;9(7). pii: E348. doi: 10.3390/genes9070348.


Directed acyclic graphs: a tool for causal studies in paediatrics.

Williams TC, Bach CC, Matthiesen NB, Henriksen TB, Gagliardi L.

Pediatr Res. 2018 Oct;84(4):487-493. doi: 10.1038/s41390-018-0071-3. Epub 2018 Jun 4. Review.


RNase H2, mutated in Aicardi-Goutières syndrome, promotes LINE-1 retrotransposition.

Benitez-Guijarro M, Lopez-Ruiz C, Tarnauskaitė Ž, Murina O, Mian Mohammad M, Williams TC, Fluteau A, Sanchez L, Vilar-Astasio R, Garcia-Canadas M, Cano D, Kempen MH, Sanchez-Pozo A, Heras SR, Jackson AP, Reijns MA, Garcia-Perez JL.

EMBO J. 2018 Aug 1;37(15). pii: e98506. doi: 10.15252/embj.201798506. Epub 2018 Jun 29.


Early responses to dehydration in contrasting wild Arachis species.

Vinson CC, Mota APZ, Oliveira TN, Guimaraes LA, Leal-Bertioli SCM, Williams TCR, Nepomuceno AL, Saraiva MAP, Araujo ACG, Guimaraes PM, Brasileiro ACM.

PLoS One. 2018 May 30;13(5):e0198191. doi: 10.1371/journal.pone.0198191. eCollection 2018.


Gas Chromatography-Mass Spectrometry-Based 13C-Labeling Studies in Plant Metabolomics.

Lima VF, de Souza LP, Williams TCR, Fernie AR, Daloso DM.

Methods Mol Biol. 2018;1778:47-58. doi: 10.1007/978-1-4939-7819-9_4.


Preterm birth and the timing of puberty: a systematic review.

James E, Wood CL, Nair H, Williams TC.

BMC Pediatr. 2018 Jan 8;18(1):3. doi: 10.1186/s12887-017-0976-8. Review.


Annual community patterns are driven by seasonal switching between closely related marine bacteria.

Ward CS, Yung CM, Davis KM, Blinebry SK, Williams TC, Johnson ZI, Hunt DE.

ISME J. 2017 Nov;11(11):2637. doi: 10.1038/ismej.2017.154.


Recent advances in synthetic biology for engineering isoprenoid production in yeast.

Vickers CE, Williams TC, Peng B, Cherry J.

Curr Opin Chem Biol. 2017 Oct;40:47-56. doi: 10.1016/j.cbpa.2017.05.017. Epub 2017 Jun 14. Review.


Different abundance and correlational patterns exist between total and presumed pathogenic Vibrio vulnificus and V. parahaemolyticus in shellfish and waters along the North Carolina coast.

Williams TC, Froelich BA, Phippen B, Fowler P, Noble RT, Oliver JD.

FEMS Microbiol Ecol. 2017 Jun 1;93(6). doi: 10.1093/femsec/fix071.


Semaglutide and Cardiovascular Outcomes in Patients with Type 2 Diabetes.

Williams TC, Stewart E.

N Engl J Med. 2017 Mar 2;376(9):891. doi: 10.1056/NEJMc1615712. No abstract available.


Annual community patterns are driven by seasonal switching between closely related marine bacteria.

Ward CS, Yung CM, Davis KM, Blinebry SK, Williams TC, Johnson ZI, Hunt DE.

ISME J. 2017 Jun;11(6):1412-1422. doi: 10.1038/ismej.2017.4. Epub 2017 Feb 24. Erratum in: ISME J. 2017 Nov;11(11):2637.


Yeast's balancing act between ethanol and glycerol production in low-alcohol wines.

Goold HD, Kroukamp H, Williams TC, Paulsen IT, Varela C, Pretorius IS.

Microb Biotechnol. 2017 Mar;10(2):264-278. doi: 10.1111/1751-7915.12488. Epub 2017 Jan 13. Review.


Donor human milk for Muslim infants in the UK.

Williams TC, Butt MZ, Mohinuddin SM, Ogilvy-Stuart AL, Clarke M, Weaver GA, Shafi MS.

Arch Dis Child Fetal Neonatal Ed. 2016 Nov;101(6):F484-F485. doi: 10.1136/archdischild-2015-310337. Epub 2016 May 25. No abstract available.


The Saccharomyces cerevisiae pheromone-response is a metabolically active stationary phase for bio-production.

Williams TC, Peng B, Vickers CE, Nielsen LK.

Metab Eng Commun. 2016 May 11;3:142-152. doi: 10.1016/j.meteno.2016.05.001. eCollection 2016 Dec.


Synthetic Evolution of Metabolic Productivity Using Biosensors.

Williams TC, Pretorius IS, Paulsen IT.

Trends Biotechnol. 2016 May;34(5):371-381. doi: 10.1016/j.tibtech.2016.02.002. Epub 2016 Mar 3. Review.


Guard cell-specific upregulation of sucrose synthase 3 reveals that the role of sucrose in stomatal function is primarily energetic.

Daloso DM, Williams TC, Antunes WC, Pinheiro DP, Müller C, Loureiro ME, Fernie AR.

New Phytol. 2016 Mar;209(4):1470-83. doi: 10.1111/nph.13704. Epub 2015 Oct 15.


Viable but Nonculturable and Persister Cells Coexist Stochastically and Are Induced by Human Serum.

Ayrapetyan M, Williams TC, Baxter R, Oliver JD.

Infect Immun. 2015 Nov;83(11):4194-203. doi: 10.1128/IAI.00404-15. Epub 2015 Aug 17.


Molecular and Physical Factors That Influence Attachment of Vibrio vulnificus to Chitin.

Williams TC, Ayrapetyan M, Oliver JD.

Appl Environ Microbiol. 2015 Sep;81(18):6158-65. doi: 10.1128/AEM.00753-15. Epub 2015 Jun 26.


Controlling heterologous gene expression in yeast cell factories on different carbon substrates and across the diauxic shift: a comparison of yeast promoter activities.

Peng B, Williams TC, Henry M, Nielsen LK, Vickers CE.

Microb Cell Fact. 2015 Jun 26;14:91. doi: 10.1186/s12934-015-0278-5.


What a general paediatrician needs to know about early life programming.

Williams TC, Drake AJ.

Arch Dis Child. 2015 Nov;100(11):1058-63. doi: 10.1136/archdischild-2014-307958. Epub 2015 May 19. Review.


Familial neonatal seizures in 36 families: Clinical and genetic features correlate with outcome.

Grinton BE, Heron SE, Pelekanos JT, Zuberi SM, Kivity S, Afawi Z, Williams TC, Casalaz DM, Yendle S, Linder I, Lev D, Lerman-Sagie T, Malone S, Bassan H, Goldberg-Stern H, Stanley T, Hayman M, Calvert S, Korczyn AD, Shevell M, Scheffer IE, Mulley JC, Berkovic SF.

Epilepsia. 2015 Jul;56(7):1071-80. doi: 10.1111/epi.13020. Epub 2015 May 15.


Dynamic regulation of gene expression using sucrose responsive promoters and RNA interference in Saccharomyces cerevisiae.

Williams TC, Espinosa MI, Nielsen LK, Vickers CE.

Microb Cell Fact. 2015 Apr 1;14:43. doi: 10.1186/s12934-015-0223-7.


Tobacco guard cells fix CO2 by both Rubisco and PEPcase while sucrose acts as a substrate during light-induced stomatal opening.

Daloso DM, Antunes WC, Pinheiro DP, Waquim JP, Araújo WL, Loureiro ME, Fernie AR, Williams TC.

Plant Cell Environ. 2015 Nov;38(11):2353-71. doi: 10.1111/pce.12555. Epub 2015 Jun 4.


Quorum-sensing linked RNA interference for dynamic metabolic pathway control in Saccharomyces cerevisiae.

Williams TC, Averesch NJH, Winter G, Plan MR, Vickers CE, Nielsen LK, Krömer JO.

Metab Eng. 2015 May;29:124-134. doi: 10.1016/j.ymben.2015.03.008. Epub 2015 Mar 16.


Evolutionary Engineering Improves Tolerance for Replacement Jet Fuels in Saccharomyces cerevisiae.

Brennan TC, Williams TC, Schulz BL, Palfreyman RW, Krömer JO, Nielsen LK.

Appl Environ Microbiol. 2015 May 15;81(10):3316-25. doi: 10.1128/AEM.04144-14. Epub 2015 Mar 6.


When Doing Wrong Feels So Right: Normalization of Deviance.

Price MR, Williams TC.

J Patient Saf. 2018 Mar;14(1):1-2. doi: 10.1097/PTS.0000000000000157. Review.


Transcriptome sequencing reveals the virulence and environmental genetic programs of Vibrio vulnificus exposed to host and estuarine conditions.

Williams TC, Blackman ER, Morrison SS, Gibas CJ, Oliver JD.

PLoS One. 2014 Dec 9;9(12):e114376. doi: 10.1371/journal.pone.0114376. eCollection 2014.


Bridging the gap between viable but non-culturable and antibiotic persistent bacteria.

Ayrapetyan M, Williams TC, Oliver JD.

Trends Microbiol. 2015 Jan;23(1):7-13. doi: 10.1016/j.tim.2014.09.004. Epub 2014 Oct 16.


Serum Survival of Vibrio vulnificus: Role of Genotype, Capsule, Complement, Clinical Origin, and in Situ Incubation.

Williams TC, Ayrapetyan M, Ryan H, Oliver JD.

Pathogens. 2014 Oct 3;3(4):822-32. doi: 10.3390/pathogens3040822.


The recognition of and care seeking behaviour for childhood illness in developing countries: a systematic review.

Geldsetzer P, Williams TC, Kirolos A, Mitchell S, Ratcliffe LA, Kohli-Lynch MK, Bischoff EJ, Cameron S, Campbell H.

PLoS One. 2014 Apr 9;9(4):e93427. doi: 10.1371/journal.pone.0093427. eCollection 2014. Review.


A variant of KCC2 from patients with febrile seizures impairs neuronal Cl- extrusion and dendritic spine formation.

Puskarjov M, Seja P, Heron SE, Williams TC, Ahmad F, Iona X, Oliver KL, Grinton BE, Vutskits L, Scheffer IE, Petrou S, Blaesse P, Dibbens LM, Berkovic SF, Kaila K.

EMBO Rep. 2014 Jun;15(6):723-9. doi: 10.1002/embr.201438749. Epub 2014 Mar 24.


Interspecific quorum sensing mediates the resuscitation of viable but nonculturable vibrios.

Ayrapetyan M, Williams TC, Oliver JD.

Appl Environ Microbiol. 2014 Apr;80(8):2478-83. doi: 10.1128/AEM.00080-14. Epub 2014 Feb 7.


Foamy macrophage responses in the rat lung following exposure to inhaled pharmaceuticals: a simple, pragmatic approach for inhaled drug development.

Lewis DJ, Williams TC, Beck SL.

J Appl Toxicol. 2014 Apr;34(4):319-31. doi: 10.1002/jat.2950. Epub 2013 Nov 6. Review.


Long-term impacts of selective logging on two Amazonian tree species with contrasting ecological and reproductive characteristics: inferences from Eco-gene model simulations.

Vinson CC, Kanashiro M, Sebbenn AM, Williams TC, Harris SA, Boshier DH.

Heredity (Edinb). 2015 Aug;115(2):130-9. doi: 10.1038/hdy.2013.146. Epub 2014 Jan 15.


Implications of chitin attachment for the environmental persistence and clinical nature of the human pathogen Vibrio vulnificus.

Williams TC, Ayrapetyan M, Oliver JD.

Appl Environ Microbiol. 2014 Mar;80(5):1580-7. doi: 10.1128/AEM.03811-13. Epub 2013 Dec 20.


Next-generation sequencing can reveal in vitro-generated PCR crossover products: some artifactual sequences correspond to HLA alleles in the IMGT/HLA database.

Holcomb CL, Rastrou M, Williams TC, Goodridge D, Lazaro AM, Tilanus M, Erlich HA.

Tissue Antigens. 2014 Jan;83(1):32-40. doi: 10.1111/tan.12269.


Quantification of ¹³C enrichments and isotopomer abundances for metabolic flux analysis using 1D NMR spectroscopy.

Masakapalli SK, Ratcliffe RG, Williams TC.

Methods Mol Biol. 2014;1090:73-86. doi: 10.1007/978-1-62703-688-7_5.


Human milk for preterm infants: why, what, when and how?

Menon G, Williams TC.

Arch Dis Child Fetal Neonatal Ed. 2013 Nov;98(6):F559-62. doi: 10.1136/archdischild-2012-303582. Epub 2013 Jul 26. Review.


Unusual empyema.

Guarner J, Burd EM, Williams TC, Jerris R, Del Rio C.

J Clin Microbiol. 2013 Jul;51(7):2017, 2473. doi: 10.1128/JCM.01525-12. No abstract available.


A method for accounting for maintenance costs in flux balance analysis improves the prediction of plant cell metabolic phenotypes under stress conditions.

Cheung CY, Williams TC, Poolman MG, Fell DA, Ratcliffe RG, Sweetlove LJ.

Plant J. 2013 Sep;75(6):1050-61. doi: 10.1111/tpj.12252. Epub 2013 Aug 6.


The development and analysis of tutorial dialogues in AutoTutor Lite.

Wolfe CR, Widmer CL, Reyna VF, Hu X, Cedillos EM, Fisher CR, Brust-Renck PG, Williams TC, Damas Vannucchi I, Weil AM.

Behav Res Methods. 2013 Sep;45(3):623-36. doi: 10.3758/s13428-013-0352-z.

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