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Items: 1 to 50 of 94

1.

The Human Cytomegalovirus Chemokine vCXCL-1 Modulates Normal Dissemination Kinetics of Murine Cytomegalovirus In Vivo.

Jackson JW, Hancock TJ, LaPrade E, Dogra P, Gann ER, Masi TJ, Panchanathan R, Miller WE, Wilhelm SW, Sparer TE.

MBio. 2019 Jun 25;10(3). pii: e01289-19. doi: 10.1128/mBio.01289-19.

2.

One-time nitrogen fertilization shifts switchgrass soil microbiomes within a context of larger spatial and temporal variation.

Chen H, Yang ZK, Yip D, Morris RH, Lebreux SJ, Cregger MA, Klingeman DM, Hui D, Hettich RL, Wilhelm SW, Wang G, Löffler FE, Schadt CW.

PLoS One. 2019 Jun 18;14(6):e0211310. doi: 10.1371/journal.pone.0211310. eCollection 2019.

3.

Urea Is Both a Carbon and Nitrogen Source for Microcystis aeruginosa: Tracking 13C Incorporation at Bloom pH Conditions.

Krausfeldt LE, Farmer AT, Castro Gonzalez HF, Zepernick BN, Campagna SR, Wilhelm SW.

Front Microbiol. 2019 May 17;10:1064. doi: 10.3389/fmicb.2019.01064. eCollection 2019.

4.

Corrigendum: Genome and Environmental Activity of a Chrysochromulina parva Virus and Its Virophages.

Stough JMA, Yutin N, Chaban YV, Moniruzzaman M, Gann ER, Pound HL, Steffen MM, Black JN, Koonin EV, Wilhelm SW, Short SM.

Front Microbiol. 2019 Apr 24;10:907. doi: 10.3389/fmicb.2019.00907. eCollection 2019.

5.

Genome and Environmental Activity of a Chrysochromulina parva Virus and Its Virophages.

Stough JMA, Yutin N, Chaban YV, Moniruzzaman M, Gann ER, Pound HL, Steffen MM, Black JN, Koonin EV, Wilhelm SW, Short SM.

Front Microbiol. 2019 Apr 5;10:703. doi: 10.3389/fmicb.2019.00703. eCollection 2019. Erratum in: Front Microbiol. 2019 Apr 24;10:907.

6.

Nutrient stoichiometry shapes microbial coevolution.

Larsen ML, Wilhelm SW, Lennon JT.

Ecol Lett. 2019 Jun;22(6):1009-1018. doi: 10.1111/ele.13252. Epub 2019 Mar 29.

PMID:
30924583
7.

Cryopreservation of Paramecium bursaria Chlorella Virus-1 during an active infection cycle of its host.

Coy SR, Alsante AN, Van Etten JL, Wilhelm SW.

PLoS One. 2019 Mar 14;14(3):e0211755. doi: 10.1371/journal.pone.0211755. eCollection 2019.

8.

Viral and bacterial community responses to stimulated Fe(III)-bioreduction during simulated subsurface bioremediation.

Liang X, Zhuang J, Löffler FE, Zhang Y, DeBruyn JM, Wilhelm SW, Schaeffer SM, Radosevich M.

Environ Microbiol. 2019 Jun;21(6):2043-2055. doi: 10.1111/1462-2920.14566. Epub 2019 Mar 28.

PMID:
30773777
9.

Spatial and Temporal Variation in Paralytic Shellfish Toxin Production by Benthic Microseira (Lyngbya) wollei in a Freshwater New York Lake.

Smith ZJ, Martin RM, Wei B, Wilhelm SW, Boyer GL.

Toxins (Basel). 2019 Jan 15;11(1). pii: E44. doi: 10.3390/toxins11010044.

10.

Minimum Information about an Uncultivated Virus Genome (MIUViG).

Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M, Kuhn JH, Lavigne R, Brister JR, Varsani A, Amid C, Aziz RK, Bordenstein SR, Bork P, Breitbart M, Cochrane GR, Daly RA, Desnues C, Duhaime MB, Emerson JB, Enault F, Fuhrman JA, Hingamp P, Hugenholtz P, Hurwitz BL, Ivanova NN, Labonté JM, Lee KB, Malmstrom RR, Martinez-Garcia M, Mizrachi IK, Ogata H, Páez-Espino D, Petit MA, Putonti C, Rattei T, Reyes A, Rodriguez-Valera F, Rosario K, Schriml L, Schulz F, Steward GF, Sullivan MB, Sunagawa S, Suttle CA, Temperton B, Tringe SG, Thurber RV, Webster NS, Whiteson KL, Wilhelm SW, Wommack KE, Woyke T, Wrighton KC, Yilmaz P, Yoshida T, Young MJ, Yutin N, Allen LZ, Kyrpides NC, Eloe-Fadrosh EA.

Nat Biotechnol. 2019 Jan;37(1):29-37. doi: 10.1038/nbt.4306. Epub 2018 Dec 17.

PMID:
30556814
11.

Cylindrospermopsis raciborskii Virus and host: genomic characterization and ecological relevance.

Martin RM, Moniruzzaman M, Mucci NC, Willis A, Woodhouse JN, Xian Y, Xiao C, Brussaard CPD, Wilhelm SW.

Environ Microbiol. 2019 Jun;21(6):1942-1956. doi: 10.1111/1462-2920.14425. Epub 2018 Oct 25.

PMID:
30251319
12.

Diversity of Active Viral Infections within the Sphagnum Microbiome.

Stough JMA, Kolton M, Kostka JE, Weston DJ, Pelletier DA, Wilhelm SW.

Appl Environ Microbiol. 2018 Nov 15;84(23). pii: e01124-18. doi: 10.1128/AEM.01124-18. Print 2018 Dec 1.

13.

Viruses of Eukaryotic Algae: Diversity, Methods for Detection, and Future Directions.

Coy SR, Gann ER, Pound HL, Short SM, Wilhelm SW.

Viruses. 2018 Sep 11;10(9). pii: E487. doi: 10.3390/v10090487. Review.

14.

Seasonal Gene Expression and the Ecophysiological Implications of Toxic Microcystis aeruginosa Blooms in Lake Taihu.

Tang X, Krausfeldt LE, Shao K, LeCleir GR, Stough JMA, Gao G, Boyer GL, Zhang Y, Paerl HW, Qin B, Wilhelm SW.

Environ Sci Technol. 2018 Oct 2;52(19):11049-11059. doi: 10.1021/acs.est.8b01066. Epub 2018 Sep 14.

PMID:
30168717
15.

Strength in numbers: Collaborative science for new experimental model systems.

Waller RF, Cleves PA, Rubio-Brotons M, Woods A, Bender SJ, Edgcomb V, Gann ER, Jones AC, Teytelman L, von Dassow P, Wilhelm SW, Collier JL.

PLoS Biol. 2018 Jul 2;16(7):e2006333. doi: 10.1371/journal.pbio.2006333. eCollection 2018 Jul.

16.

Infection by a Giant Virus (AaV) Induces Widespread Physiological Reprogramming in Aureococcus anophagefferens CCMP1984 - A Harmful Bloom Algae.

Moniruzzaman M, Gann ER, Wilhelm SW.

Front Microbiol. 2018 Apr 19;9:752. doi: 10.3389/fmicb.2018.00752. eCollection 2018.

17.

Seasonally Relevant Cool Temperatures Interact with N Chemistry to Increase Microcystins Produced in Lab Cultures of Microcystis aeruginosa NIES-843.

Peng G, Martin RM, Dearth SP, Sun X, Boyer GL, Campagna SR, Lin S, Wilhelm SW.

Environ Sci Technol. 2018 Apr 3;52(7):4127-4136. doi: 10.1021/acs.est.7b06532. Epub 2018 Mar 19.

PMID:
29522323
18.

Microcystin-LR does not induce alterations to transcriptomic or metabolomic profiles of a model heterotrophic bacterium.

Martin RM, Dearth SP, LeCleir GR, Campagna SR, Fozo EM, Zinser ER, Wilhelm SW.

PLoS One. 2017 Dec 14;12(12):e0189608. doi: 10.1371/journal.pone.0189608. eCollection 2017.

19.

Author Correction: Re-examination of the relationship between marine virus and microbial cell abundances.

Wigington CH, Sonderegger D, Brussaard CPD, Buchan A, Finke JF, Fuhrman JA, Lennon JT, Middelboe M, Suttle CA, Stock C, Wilson WH, Wommack KE, Wilhelm SW, Weitz JS.

Nat Microbiol. 2017 Nov;2(11):1571. doi: 10.1038/s41564-017-0042-1.

PMID:
28974689
20.

Contrasting seasonal drivers of virus abundance and production in the North Pacific Ocean.

Gainer PJ, Pound HL, Larkin AA, LeCleir GR, DeBruyn JM, Zinser ER, Johnson ZI, Wilhelm SW.

PLoS One. 2017 Sep 7;12(9):e0184371. doi: 10.1371/journal.pone.0184371. eCollection 2017.

21.

Molecular prediction of lytic vs lysogenic states for Microcystis phage: Metatranscriptomic evidence of lysogeny during large bloom events.

Stough JMA, Tang X, Krausfeldt LE, Steffen MM, Gao G, Boyer GL, Wilhelm SW.

PLoS One. 2017 Sep 5;12(9):e0184146. doi: 10.1371/journal.pone.0184146. eCollection 2017.

22.

Virus-host relationships of marine single-celled eukaryotes resolved from metatranscriptomics.

Moniruzzaman M, Wurch LL, Alexander H, Dyhrman ST, Gobler CJ, Wilhelm SW.

Nat Commun. 2017 Jun 28;8:16054. doi: 10.1038/ncomms16054.

23.

Community Biological Ammonium Demand: A Conceptual Model for Cyanobacteria Blooms in Eutrophic Lakes.

Gardner WS, Newell SE, McCarthy MJ, Hoffman DK, Lu K, Lavrentyev PJ, Hellweger FL, Wilhelm SW, Liu Z, Bruesewitz DA, Paerl HW.

Environ Sci Technol. 2017 Jul 18;51(14):7785-7793. doi: 10.1021/acs.est.6b06296. Epub 2017 Jul 7.

PMID:
28648051
24.

Ecophysiological Examination of the Lake Erie Microcystis Bloom in 2014: Linkages between Biology and the Water Supply Shutdown of Toledo, OH.

Steffen MM, Davis TW, McKay RML, Bullerjahn GS, Krausfeldt LE, Stough JMA, Neitzey ML, Gilbert NE, Boyer GL, Johengen TH, Gossiaux DC, Burtner AM, Palladino D, Rowe MD, Dick GJ, Meyer KA, Levy S, Boone BE, Stumpf RP, Wynne TT, Zimba PV, Gutierrez D, Wilhelm SW.

Environ Sci Technol. 2017 Jun 20;51(12):6745-6755. doi: 10.1021/acs.est.7b00856. Epub 2017 Jun 8.

PMID:
28535339
25.

Genomic exploration of individual giant ocean viruses.

Wilson WH, Gilg IC, Moniruzzaman M, Field EK, Koren S, LeCleir GR, Martínez Martínez J, Poulton NJ, Swan BK, Stepanauskas R, Wilhelm SW.

ISME J. 2017 Aug;11(8):1736-1745. doi: 10.1038/ismej.2017.61. Epub 2017 May 12.

26.

Spatial and temporal variability in the nitrogen cyclers of hypereutrophic Lake Taihu.

Krausfeldt LE, Tang X, van de Kamp J, Gao G, Bodrossy L, Boyer GL, Wilhelm SW.

FEMS Microbiol Ecol. 2017 Apr 1;93(4). doi: 10.1093/femsec/fix024.

PMID:
28334116
27.

A Student's Guide to Giant Viruses Infecting Small Eukaryotes: From Acanthamoeba to Zooxanthellae.

Wilhelm SW, Bird JT, Bonifer KS, Calfee BC, Chen T, Coy SR, Gainer PJ, Gann ER, Heatherly HT, Lee J, Liang X, Liu J, Armes AC, Moniruzzaman M, Rice JH, Stough JM, Tams RN, Williams EP, LeCleir GR.

Viruses. 2017 Mar 17;9(3). pii: E46. doi: 10.3390/v9030046. Review.

28.

The re-eutrophication of Lake Erie: Harmful algal blooms and hypoxia.

Watson SB, Miller C, Arhonditsis G, Boyer GL, Carmichael W, Charlton MN, Confesor R, Depew DC, Höök TO, Ludsin SA, Matisoff G, McElmurry SP, Murray MW, Peter Richards R, Rao YR, Steffen MM, Wilhelm SW.

Harmful Algae. 2016 Jun;56:44-66. doi: 10.1016/j.hal.2016.04.010. Epub 2016 May 18. Review.

PMID:
28073496
29.

A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp.

Harke MJ, Steffen MM, Gobler CJ, Otten TG, Wilhelm SW, Wood SA, Paerl HW.

Harmful Algae. 2016 Apr;54:4-20. doi: 10.1016/j.hal.2015.12.007. Review.

PMID:
28073480
30.

Global solutions to regional problems: Collecting global expertise to address the problem of harmful cyanobacterial blooms. A Lake Erie case study.

Bullerjahn GS, McKay RM, Davis TW, Baker DB, Boyer GL, D'Anglada LV, Doucette GJ, Ho JC, Irwin EG, Kling CL, Kudela RM, Kurmayer R, Michalak AM, Ortiz JD, Otten TG, Paerl HW, Qin B, Sohngen BL, Stumpf RP, Visser PM, Wilhelm SW.

Harmful Algae. 2016 Apr;54:223-238. doi: 10.1016/j.hal.2016.01.003. Review.

31.

Functional Characteristics of the Gut Microbiome in C57BL/6 Mice Differentially Susceptible to Plasmodium yoelii.

Stough JM, Dearth SP, Denny JE, LeCleir GR, Schmidt NW, Campagna SR, Wilhelm SW.

Front Microbiol. 2016 Sep 27;7:1520. eCollection 2016.

32.

It Takes Two to Tango: When and Where Dual Nutrient (N & P) Reductions Are Needed to Protect Lakes and Downstream Ecosystems.

Paerl HW, Scott JT, McCarthy MJ, Newell SE, Gardner WS, Havens KE, Hoffman DK, Wilhelm SW, Wurtsbaugh WA.

Environ Sci Technol. 2016 Oct 18;50(20):10805-10813. doi: 10.1021/acs.est.6b02575. Epub 2016 Oct 6.

PMID:
27667268
33.

Re-examination of the relationship between marine virus and microbial cell abundances.

Wigington CH, Sonderegger D, Brussaard CP, Buchan A, Finke JF, Fuhrman JA, Lennon JT, Middelboe M, Suttle CA, Stock C, Wilson WH, Wommack KE, Wilhelm SW, Weitz JS.

Nat Microbiol. 2016 Jan 25;1:15024. doi: 10.1038/nmicrobiol.2015.24. Erratum in: Nat Microbiol. 2017 Nov;2(11):1571.

PMID:
27572161
34.

Standing on the Shoulders of Giant Viruses: Five Lessons Learned about Large Viruses Infecting Small Eukaryotes and the Opportunities They Create.

Wilhelm SW, Coy SR, Gann ER, Moniruzzaman M, Stough JM.

PLoS Pathog. 2016 Aug 25;12(8):e1005752. doi: 10.1371/journal.ppat.1005752. eCollection 2016 Aug. Review. No abstract available.

35.

Dynamic, mechanistic, molecular-level modelling of cyanobacteria: Anabaena and nitrogen interaction.

Hellweger FL, Fredrick ND, McCarthy MJ, Gardner WS, Wilhelm SW, Paerl HW.

Environ Microbiol. 2016 Sep;18(8):2721-31. doi: 10.1111/1462-2920.13299. Epub 2016 Apr 28.

PMID:
27059435
36.

Diversity and dynamics of algal Megaviridae members during a harmful brown tide caused by the pelagophyte, Aureococcus anophagefferens.

Moniruzzaman M, Gann ER, LeCleir GR, Kang Y, Gobler CJ, Wilhelm SW.

FEMS Microbiol Ecol. 2016 May;92(5):fiw058. doi: 10.1093/femsec/fiw058. Epub 2016 Mar 15.

PMID:
26985013
37.

Composition of the gut microbiota modulates the severity of malaria.

Villarino NF, LeCleir GR, Denny JE, Dearth SP, Harding CL, Sloan SS, Gribble JL, Campagna SR, Wilhelm SW, Schmidt NW.

Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):2235-40. doi: 10.1073/pnas.1504887113. Epub 2016 Feb 8.

38.

Latitudinal variation in virus-induced mortality of phytoplankton across the North Atlantic Ocean.

Mojica KD, Huisman J, Wilhelm SW, Brussaard CP.

ISME J. 2016 Feb;10(2):500-13. doi: 10.1038/ismej.2015.130. Epub 2015 Aug 11.

39.

Examining the impact of acetylene on N-fixation and the active sediment microbial community.

Fulweiler RW, Heiss EM, Rogener MK, Newell SE, LeCleir GR, Kortebein SM, Wilhelm SW.

Front Microbiol. 2015 May 12;6:418. doi: 10.3389/fmicb.2015.00418. eCollection 2015.

40.

Metatranscriptomic evidence for co-occurring top-down and bottom-up controls on toxic cyanobacterial communities.

Steffen MM, Belisle BS, Watson SB, Boyer GL, Bourbonniere RA, Wilhelm SW.

Appl Environ Microbiol. 2015 May 1;81(9):3268-76. doi: 10.1128/AEM.04101-14. Epub 2015 Feb 6.

41.

A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes.

Weitz JS, Stock CA, Wilhelm SW, Bourouiba L, Coleman ML, Buchan A, Follows MJ, Fuhrman JA, Jover LF, Lennon JT, Middelboe M, Sonderegger DL, Suttle CA, Taylor BP, Frede Thingstad T, Wilson WH, Eric Wommack K.

ISME J. 2015 Jun;9(6):1352-64. doi: 10.1038/ismej.2014.220. Epub 2015 Jan 30.

42.

Iron stable isotopes track pelagic iron cycling during a subtropical phytoplankton bloom.

Ellwood MJ, Hutchins DA, Lohan MC, Milne A, Nasemann P, Nodder SD, Sander SG, Strzepek R, Wilhelm SW, Boyd PW.

Proc Natl Acad Sci U S A. 2015 Jan 6;112(1):E15-20. doi: 10.1073/pnas.1421576112. Epub 2014 Dec 22.

43.

The fate of microcystins in the environment and challenges for monitoring.

Schmidt JR, Wilhelm SW, Boyer GL.

Toxins (Basel). 2014 Dec 12;6(12):3354-87. doi: 10.3390/toxins6123354. Review.

44.

Algal blooms: noteworthy nitrogen.

Paerl HW, Gardner WS, McCarthy MJ, Peierls BL, Wilhelm SW.

Science. 2014 Oct 10;346(6206):175. doi: 10.1126/science.346.6206.175-a. Epub 2014 Oct 9. No abstract available.

PMID:
25301607
45.

[Source analysis of urea-N in Lake Taihu during summer].

Han XX, Zhu GW, Xu H, Wilhelm SW, Qin BQ, Li ZF.

Huan Jing Ke Xue. 2014 Jul;35(7):2547-56. Chinese.

PMID:
25244836
46.

Genome of brown tide virus (AaV), the little giant of the Megaviridae, elucidates NCLDV genome expansion and host-virus coevolution.

Moniruzzaman M, LeCleir GR, Brown CM, Gobler CJ, Bidle KD, Wilson WH, Wilhelm SW.

Virology. 2014 Oct;466-467:60-70. doi: 10.1016/j.virol.2014.06.031. Epub 2014 Jul 14.

47.

The elemental composition of virus particles: implications for marine biogeochemical cycles.

Jover LF, Effler TC, Buchan A, Wilhelm SW, Weitz JS.

Nat Rev Microbiol. 2014 Jul;12(7):519-28. doi: 10.1038/nrmicro3289.

PMID:
24931044
48.

Genome Sequences of Two Temperate Phages, ΦCB2047-A and ΦCB2047-C, Infecting Sulfitobacter sp. Strain 2047.

Ankrah NY, Budinoff CR, Wilson WH, Wilhelm SW, Buchan A.

Genome Announc. 2014 Jun 5;2(3). pii: e00108-14. doi: 10.1128/genomeA.00108-14.

49.

Nutrients drive transcriptional changes that maintain metabolic homeostasis but alter genome architecture in Microcystis.

Steffen MM, Dearth SP, Dill BD, Li Z, Larsen KM, Campagna SR, Wilhelm SW.

ISME J. 2014 Oct;8(10):2080-92. doi: 10.1038/ismej.2014.78. Epub 2014 May 23. Erratum in: ISME J. 2014 Oct;8(10):2152.

50.

Toward more transparent and reproducible omics studies through a common metadata checklist and data publications.

Kolker E, Özdemir V, Martens L, Hancock W, Anderson G, Anderson N, Aynacioglu S, Baranova A, Campagna SR, Chen R, Choiniere J, Dearth SP, Feng WC, Ferguson L, Fox G, Frishman D, Grossman R, Heath A, Higdon R, Hutz MH, Janko I, Jiang L, Joshi S, Kel A, Kemnitz JW, Kohane IS, Kolker N, Lancet D, Lee E, Li W, Lisitsa A, Llerena A, Macnealy-Koch C, Marshall JC, Masuzzo P, May A, Mias G, Monroe M, Montague E, Mooney S, Nesvizhskii A, Noronha S, Omenn G, Rajasimha H, Ramamoorthy P, Sheehan J, Smarr L, Smith CV, Smith T, Snyder M, Rapole S, Srivastava S, Stanberry L, Stewart E, Toppo S, Uetz P, Verheggen K, Voy BH, Warnich L, Wilhelm SW, Yandl G.

OMICS. 2014 Jan;18(1):10-4. doi: 10.1089/omi.2013.0149.

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