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Items: 1 to 50 of 118

1.

Additional considerations to the use of single-step genomic predictions in a dominance setting.

Mota RR, Vanderick S, Colinet FG, Hammami H, Wiggans GR, Gengler N.

J Anim Breed Genet. 2019 Jun 3. doi: 10.1111/jbg.12406. [Epub ahead of print]

PMID:
31161675
2.

Genome-wide association study for milk production traits in a Brazilian Holstein population.

Iung LHS, Petrini J, Ramírez-Díaz J, Salvian M, Rovadoscki GA, Pilonetto F, Dauria BD, Machado PF, Coutinho LL, Wiggans GR, Mourão GB.

J Dairy Sci. 2019 Jun;102(6):5305-5314. doi: 10.3168/jds.2018-14811. Epub 2019 Mar 21.

PMID:
30904307
3.

Erratum to "Pedigree verification and parentage assignment using genomic information in the Mexican Holstein population" (J. Dairy Sci. 102:1806-1810).

García-Ruiz A, Wiggans GR, Ruiz-López FJ.

J Dairy Sci. 2019 Apr;102(4):3779. doi: 10.3168/jds.2019-102-4-3779. No abstract available.

PMID:
30878077
4.

Genome changes due to artificial selection in U.S. Holstein cattle.

Ma L, Sonstegard TS, Cole JB, VanTassell CP, Wiggans GR, Crooker BA, Tan C, Prakapenka D, Liu GE, Da Y.

BMC Genomics. 2019 Feb 11;20(1):128. doi: 10.1186/s12864-019-5459-x.

5.

Pedigree verification and parentage assignment using genomic information in the Mexican Holstein population.

García-Ruiz A, Wiggans GR, Ruiz-López FJ.

J Dairy Sci. 2019 Feb;102(2):1806-1810. doi: 10.3168/jds.2018-15076. Epub 2018 Dec 24. Erratum in: J Dairy Sci. 2019 Apr;102(4):3779.

PMID:
30591329
6.

Determination of quantitative trait nucleotides by concordance analysis between quantitative trait loci and marker genotypes of US Holsteins.

Weller JI, Bickhart DM, Wiggans GR, Tooker ME, O'Connell JR, Jiang J, Ron M, VanRaden PM.

J Dairy Sci. 2018 Oct;101(10):9089-9107. doi: 10.3168/jds.2018-14816. Epub 2018 Jul 19.

PMID:
30031583
7.

Genome-wide copy number variant analysis reveals variants associated with 10 diverse production traits in Holstein cattle.

Zhou Y, Connor EE, Wiggans GR, Lu Y, Tempelman RJ, Schroeder SG, Chen H, Liu GE.

BMC Genomics. 2018 May 2;19(1):314. doi: 10.1186/s12864-018-4699-5.

8.

The genetic and biological basis of feed efficiency in mid-lactation Holstein dairy cows.

Hardie LC, VandeHaar MJ, Tempelman RJ, Weigel KA, Armentano LE, Wiggans GR, Veerkamp RF, de Haas Y, Coffey MP, Connor EE, Hanigan MD, Staples C, Wang Z, Dekkers JCM, Spurlock DM.

J Dairy Sci. 2017 Nov;100(11):9061-9075. doi: 10.3168/jds.2017-12604. Epub 2017 Aug 23.

9.

Genomic Selection in Dairy Cattle: The USDA Experience.

Wiggans GR, Cole JB, Hubbard SM, Sonstegard TS.

Annu Rev Anim Biosci. 2017 Feb 8;5:309-327. doi: 10.1146/annurev-animal-021815-111422. Epub 2016 Nov 16. Review.

PMID:
27860491
10.

Cow genotyping strategies for genomic selection in a small dairy cattle population.

Jenko J, Wiggans GR, Cooper TA, Eaglen SAE, Luff WGL, Bichard M, Pong-Wong R, Woolliams JA.

J Dairy Sci. 2017 Jan;100(1):439-452. doi: 10.3168/jds.2016-11479. Epub 2016 Nov 9.

11.

Optimal Design of Low-Density SNP Arrays for Genomic Prediction: Algorithm and Applications.

Wu XL, Xu J, Feng G, Wiggans GR, Taylor JF, He J, Qian C, Qiu J, Simpson B, Walker J, Bauck S.

PLoS One. 2016 Sep 1;11(9):e0161719. doi: 10.1371/journal.pone.0161719. eCollection 2016.

12.

Changes in genetic selection differentials and generation intervals in US Holstein dairy cattle as a result of genomic selection.

García-Ruiz A, Cole JB, VanRaden PM, Wiggans GR, Ruiz-López FJ, Van Tassell CP.

Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):E3995-4004. doi: 10.1073/pnas.1519061113. Epub 2016 Jun 27. Erratum in: Proc Natl Acad Sci U S A. 2016 Aug 16;113(33):E4928.

13.

Genomic evaluation, breed identification, and population structure of Guernsey cattle in North America, Great Britain, and the Isle of Guernsey.

Cooper TA, Eaglen SAE, Wiggans GR, Jenko J, Huson HJ, Morrice DR, Bichard M, Luff WGL, Woolliams JA.

J Dairy Sci. 2016 Jul;99(7):5508-5515. doi: 10.3168/jds.2015-10445. Epub 2016 May 11.

14.

Increasing the number of single nucleotide polymorphisms used in genomic evaluation of dairy cattle.

Wiggans GR, Cooper TA, VanRaden PM, Van Tassell CP, Bickhart DM, Sonstegard TS.

J Dairy Sci. 2016 Jun;99(6):4504-4511. doi: 10.3168/jds.2015-10456. Epub 2016 Mar 31.

15.

Genetic parameters for milk fatty acids, milk yield and quality traits of a Holstein cattle population reared under tropical conditions.

Petrini J, Iung LH, Rodriguez MA, Salvian M, Pértille F, Rovadoscki GA, Cassoli LD, Coutinho LL, Machado PF, Wiggans GR, Mourão GB.

J Anim Breed Genet. 2016 Oct;133(5):384-95. doi: 10.1111/jbg.12205. Epub 2016 Mar 9.

PMID:
26968150
16.

Using genomics to enhance selection of novel traits in North American dairy cattle.

Chesnais JP, Cooper TA, Wiggans GR, Sargolzaei M, Pryce JE, Miglior F.

J Dairy Sci. 2016 Mar;99(3):2413-2427. doi: 10.3168/jds.2015-9970. Epub 2016 Jan 6.

17.

Cattle Sex-Specific Recombination and Genetic Control from a Large Pedigree Analysis.

Ma L, O'Connell JR, VanRaden PM, Shen B, Padhi A, Sun C, Bickhart DM, Cole JB, Null DJ, Liu GE, Da Y, Wiggans GR.

PLoS Genet. 2015 Nov 5;11(11):e1005387. doi: 10.1371/journal.pgen.1005387. eCollection 2015 Nov.

18.

Effect of reference population size and available ancestor genotypes on imputation of Mexican Holstein genotypes.

García-Ruiz A, Ruiz-Lopez FJ, Wiggans GR, Van Tassell CP, Montaldo HH.

J Dairy Sci. 2015 May;98(5):3478-84. doi: 10.3168/jds.2014-9132. Epub 2015 Mar 12.

19.

Short communication: Improving accuracy of Jersey genomic evaluations in the United States and Denmark by sharing reference population bulls.

Wiggans GR, Su G, Cooper TA, Nielsen US, Aamand GP, Guldbrandtsen B, Lund MS, VanRaden PM.

J Dairy Sci. 2015 May;98(5):3508-13. doi: 10.3168/jds.2014-8874. Epub 2015 Mar 12.

20.

Short communication: Analysis of genomic predictor population for Holstein dairy cattle in the United States--Effects of sex and age.

Cooper TA, Wiggans GR, VanRaden PM.

J Dairy Sci. 2015 Apr;98(4):2785-8. doi: 10.3168/jds.2014-8894. Epub 2015 Jan 31.

21.

Technical note: Rapid calculation of genomic evaluations for new animals.

Wiggans GR, VanRaden PM, Cooper TA.

J Dairy Sci. 2015 Mar;98(3):2039-42. doi: 10.3168/jds.2014-8868. Epub 2014 Dec 31.

22.

Genomic evaluation, breed identification, and discovery of a haplotype affecting fertility for Ayrshire dairy cattle.

Cooper TA, Wiggans GR, Null DJ, Hutchison JL, Cole JB.

J Dairy Sci. 2014;97(6):3878-82. doi: 10.3168/jds.2013-7427. Epub 2014 Mar 27.

23.

Application of the a posteriori granddaughter design to the Holstein genome.

Weller JI, Cole JB, Vanraden PM, Wiggans GR.

Animal. 2014 Apr;8(4):511-9. doi: 10.1017/S1751731114000111.

PMID:
24636822
24.

Effect of artificial selection on runs of homozygosity in u.s. Holstein cattle.

Kim ES, Cole JB, Huson H, Wiggans GR, Van Tassell CP, Crooker BA, Liu G, Da Y, Sonstegard TS.

PLoS One. 2013 Nov 14;8(11):e80813. doi: 10.1371/journal.pone.0080813. eCollection 2013.

25.

Imputation of microsatellite alleles from dense SNP genotypes for parentage verification across multiple Bos taurus and Bos indicus breeds.

McClure MC, Sonstegard TS, Wiggans GR, Van Eenennaam AL, Weber KL, Penedo CT, Berry DP, Flynn J, Garcia JF, Carmo AS, Regitano LC, Albuquerque M, Silva MV, Machado MA, Coffey M, Moore K, Boscher MY, Genestout L, Mazza R, Taylor JF, Schnabel RD, Simpson B, Marques E, McEwan JC, Cromie A, Coutinho LL, Kuehn LA, Keele JW, Piper EK, Cook J, Williams R; Bovine HapMap Consortium, Van Tassell CP.

Front Genet. 2013 Sep 18;4:176. doi: 10.3389/fgene.2013.00176. eCollection 2013.

26.

Application of a posteriori granddaughter and modified granddaughter designs to determine Holstein haplotype effects.

Weller JI, VanRaden PM, Wiggans GR.

J Dairy Sci. 2013 Aug;96(8):5376-87. doi: 10.3168/jds.2013-6650. Epub 2013 Jun 5.

27.

Short communication: relationship of call rate and accuracy of single nucleotide polymorphism genotypes in dairy cattle.

Cooper TA, Wiggans GR, VanRaden PM.

J Dairy Sci. 2013 May;96(5):3336-9. doi: 10.3168/jds.2012-6208. Epub 2013 Mar 15.

28.

Short communication: genetic evaluation of mobility for Brown Swiss dairy cattle.

Wright JR, Wiggans GR, Muenzenberger CJ, Neitzel RR.

J Dairy Sci. 2013 Apr;96(4):2657-2660. doi: 10.3168/jds.2012-6193. Epub 2013 Feb 10.

29.

Confirmation and discovery of maternal grandsires and great-grandsires in dairy cattle.

VanRaden PM, Cooper TA, Wiggans GR, O'Connell JR, Bacheller LR.

J Dairy Sci. 2013 Mar;96(3):1874-9. doi: 10.3168/jds.2012-6176. Epub 2013 Jan 16.

30.

Technical note: Characteristics and use of the Illumina BovineLD and GeneSeek Genomic Profiler low-density bead chips for genomic evaluation.

Wiggans GR, Cooper TA, Van Tassell CP, Sonstegard TS, Simpson EB.

J Dairy Sci. 2013 Feb;96(2):1258-63. doi: 10.3168/jds.2012-6192. Epub 2012 Dec 20.

31.

Genomic imputation and evaluation using high-density Holstein genotypes.

VanRaden PM, Null DJ, Sargolzaei M, Wiggans GR, Tooker ME, Cole JB, Sonstegard TS, Connor EE, Winters M, van Kaam JB, Valentini A, Van Doormaal BJ, Faust MA, Doak GA.

J Dairy Sci. 2013 Jan;96(1):668-78. doi: 10.3168/jds.2012-5702. Epub 2012 Oct 11.

32.

Effect of sample stratification on dairy GWAS results.

Ma L, Wiggans GR, Wang S, Sonstegard TS, Yang J, Crooker BA, Cole JB, Van Tassell CP, Lawlor TJ, Da Y.

BMC Genomics. 2012 Oct 6;13:536. doi: 10.1186/1471-2164-13-536.

33.

Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array.

Hou Y, Bickhart DM, Hvinden ML, Li C, Song J, Boichard DA, Fritz S, Eggen A, DeNise S, Wiggans GR, Sonstegard TS, Van Tassell CP, Liu GE.

BMC Genomics. 2012 Aug 6;13:376. doi: 10.1186/1471-2164-13-376.

34.

Technical note: adjustment of all cow evaluations for yield traits to be comparable with bull evaluations.

Wiggans GR, Vanraden PM, Cooper TA.

J Dairy Sci. 2012 Jun;95(6):3444-7. doi: 10.3168/jds.2011-5000.

35.

Breed differences over time and heritability estimates for production and reproduction traits of dairy goats in the United States.

García-Peniche TB, Montaldo HH, Valencia-Posadas M, Wiggans GR, Hubbard SM, Torres-Vázquez JA, Shepard L.

J Dairy Sci. 2012 May;95(5):2707-17. doi: 10.3168/jds.2011-4714.

36.

Design of a bovine low-density SNP array optimized for imputation.

Boichard D, Chung H, Dassonneville R, David X, Eggen A, Fritz S, Gietzen KJ, Hayes BJ, Lawley CT, Sonstegard TS, Van Tassell CP, VanRaden PM, Viaud-Martinez KA, Wiggans GR; Bovine LD Consortium.

PLoS One. 2012;7(3):e34130. doi: 10.1371/journal.pone.0034130. Epub 2012 Mar 28.

37.

Use of the Illumina Bovine3K BeadChip in dairy genomic evaluation.

Wiggans GR, Cooper TA, Vanraden PM, Olson KM, Tooker ME.

J Dairy Sci. 2012 Mar;95(3):1552-8. doi: 10.3168/jds.2011-4985.

38.

Technical note: adjustment of traditional cow evaluations to improve accuracy of genomic predictions.

Wiggans GR, Cooper TA, Vanraden PM, Cole JB.

J Dairy Sci. 2011 Dec;94(12):6188-93. doi: 10.3168/jds.2011-4481.

39.

Genomic inbreeding and relationships among Holsteins, Jerseys, and Brown Swiss.

VanRaden PM, Olson KM, Wiggans GR, Cole JB, Tooker ME.

J Dairy Sci. 2011 Nov;94(11):5673-82. doi: 10.3168/jds.2011-4500.

40.

Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows.

Cole JB, Wiggans GR, Ma L, Sonstegard TS, Lawlor TJ Jr, Crooker BA, Van Tassell CP, Yang J, Wang S, Matukumalli LK, Da Y.

BMC Genomics. 2011 Aug 11;12:408. doi: 10.1186/1471-2164-12-408.

41.

Imputation of missing genotypes from sparse to high density using long-range phasing.

Daetwyler HD, Wiggans GR, Hayes BJ, Woolliams JA, Goddard ME.

Genetics. 2011 Sep;189(1):317-27. doi: 10.1534/genetics.111.128082. Epub 2011 Jul 29.

42.

The genomic evaluation system in the United States: past, present, future.

Wiggans GR, Vanraden PM, Cooper TA.

J Dairy Sci. 2011 Jun;94(6):3202-11. doi: 10.3168/jds.2010-3866.

43.

Multiple trait genomic evaluation of conception rate in Holsteins.

Aguilar I, Misztal I, Tsuruta S, Wiggans GR, Lawlor TJ.

J Dairy Sci. 2011 May;94(5):2621-4. doi: 10.3168/jds.2010-3893.

44.

Genomic evaluations with many more genotypes.

VanRaden PM, O'Connell JR, Wiggans GR, Weigel KA.

Genet Sel Evol. 2011 Mar 2;43:10. doi: 10.1186/1297-9686-43-10.

45.

Selection and management of DNA markers for use in genomic evaluation.

Wiggans GR, VanRaden PM, Bacheller LR, Tooker ME, Hutchison JL, Cooper TA, Sonstegard TS.

J Dairy Sci. 2010 May;93(5):2287-92. doi: 10.3168/jds.2009-2773.

46.

Prediction of unobserved single nucleotide polymorphism genotypes of Jersey cattle using reference panels and population-based imputation algorithms.

Weigel KA, Van Tassell CP, O'Connell JR, VanRaden PM, Wiggans GR.

J Dairy Sci. 2010 May;93(5):2229-38. doi: 10.3168/jds.2009-2849.

47.

Short communication: genetic and environmental relationships between milk yield and kidding interval in dairy goats.

Montaldo HH, Valencia-Posadas M, Wiggans GR, Shepard L, Torres-Vázquez JA.

J Dairy Sci. 2010 Jan;93(1):370-2. doi: 10.3168/jds.2009-2593.

48.

Selection of single-nucleotide polymorphisms and quality of genotypes used in genomic evaluation of dairy cattle in the United States and Canada.

Wiggans GR, Sonstegard TS, VanRaden PM, Matukumalli LK, Schnabel RD, Taylor JF, Schenkel FS, Van Tassell CP.

J Dairy Sci. 2009 Jul;92(7):3431-6. doi: 10.3168/jds.2008-1758.

49.

Distribution and location of genetic effects for dairy traits.

Cole JB, VanRaden PM, O'Connell JR, Van Tassell CP, Sonstegard TS, Schnabel RD, Taylor JF, Wiggans GR.

J Dairy Sci. 2009 Jun;92(6):2931-46. doi: 10.3168/jds.2008-1762. Erratum in: J Dairy Sci. 2009 Jul;92(7):3542.

50.

Invited review: reliability of genomic predictions for North American Holstein bulls.

VanRaden PM, Van Tassell CP, Wiggans GR, Sonstegard TS, Schnabel RD, Taylor JF, Schenkel FS.

J Dairy Sci. 2009 Jan;92(1):16-24. doi: 10.3168/jds.2008-1514.

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