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Complete High-Quality Genome Sequence of Clostridium limosum (Hathewaya limosa) Isolate 14S0207, Recovered from a Cow with Suspected Blackleg in Germany.

Thomas P, Abdel-Glil MY, Busch A, Wieler LH, Eichhorn I, Bodenthin-Drauschke A, Neubauer H, Seyboldt C.

Microbiol Resour Announc. 2020 Jan 9;9(2). pii: e01487-19. doi: 10.1128/MRA.01487-19.


Comparison of different technologies for the decipherment of the whole genome sequence of Campylobacter jejuni BfR-CA-14430.

Epping L, Golz JC, Knüver MT, Huber C, Thürmer A, Wieler LH, Stingl K, Semmler T.

Gut Pathog. 2019 Dec 16;11:59. doi: 10.1186/s13099-019-0340-7. eCollection 2019.


Genomic and Functional Characterization of Poultry Escherichia coli From India Revealed Diverse Extended-Spectrum β-Lactamase-Producing Lineages With Shared Virulence Profiles.

Hussain A, Shaik S, Ranjan A, Suresh A, Sarker N, Semmler T, Wieler LH, Alam M, Watanabe H, Chakravortty D, Ahmed N.

Front Microbiol. 2019 Dec 3;10:2766. doi: 10.3389/fmicb.2019.02766. eCollection 2019.


Effects of a Four-Week High-Dosage Zinc Oxide Supplemented Diet on Commensal Escherichia coli of Weaned Pigs.

Johanns VC, Ghazisaeedi F, Epping L, Semmler T, Lübke-Becker A, Pfeifer Y, Bethe A, Eichhorn I, Merle R, Walther B, Wieler LH.

Front Microbiol. 2019 Nov 28;10:2734. doi: 10.3389/fmicb.2019.02734. eCollection 2019.


Application of a new methodology and R package reveals a high burden of healthcare-associated infections (HAI) in Germany compared to the average in the European Union/European Economic Area, 2011 to 2012.

Zacher B, Haller S, Willrich N, Walter J, Abu Sin M, Cassini A, Plachouras D, Suetens C, Behnke M, Gastmeier P, Wieler LH, Eckmanns T.

Euro Surveill. 2019 Nov;24(46). doi: 10.2807/1560-7917.ES.2019.24.46.1900135.


Functional Characterization of Knock-In Mice Expressing a 12/15-Lipoxygenating Alox5 Mutant Instead of the 5-Lipoxygenating Wild-Type Enzyme.

Marbach-Breitrück E, Kutzner L, Rothe M, Gurke R, Schreiber Y, Reddanna P, Schebb NH, Stehling S, Wieler LH, Heydeck D, Kuhn H.

Antioxid Redox Signal. 2020 Jan 1;32(1):1-17. doi: 10.1089/ars.2019.7751.


Adaptation of host transmission cycle during Clostridium difficile speciation.

Kumar N, Browne HP, Viciani E, Forster SC, Clare S, Harcourt K, Stares MD, Dougan G, Fairley DJ, Roberts P, Pirmohamed M, Clokie MRJ, Jensen MBF, Hargreaves KR, Ip M, Wieler LH, Seyboldt C, Norén T, Riley TV, Kuijper EJ, Wren BW, Lawley TD.

Nat Genet. 2019 Sep;51(9):1315-1320. doi: 10.1038/s41588-019-0478-8. Epub 2019 Aug 12.


Genomic and Functional Analysis of Emerging Virulent and Multidrug-Resistant Escherichia coli Lineage Sequence Type 648.

Schaufler K, Semmler T, Wieler LH, Trott DJ, Pitout J, Peirano G, Bonnedahl J, Dolejska M, Literak I, Fuchs S, Ahmed N, Grobbel M, Torres C, McNally A, Pickard D, Ewers C, Croucher NJ, Corander J, Guenther S.

Antimicrob Agents Chemother. 2019 May 24;63(6). pii: e00243-19. doi: 10.1128/AAC.00243-19. Print 2019 Jun.


A Core Genome Multilocus Sequence Typing Scheme for Enterococcus faecalis.

Neumann B, Prior K, Bender JK, Harmsen D, Klare I, Fuchs S, Bethe A, Zühlke D, Göhler A, Schwarz S, Schaffer K, Riedel K, Wieler LH, Werner G.

J Clin Microbiol. 2019 Feb 27;57(3). pii: e01686-18. doi: 10.1128/JCM.01686-18. Print 2019 Mar.


Antibiotic resistance, the 3As and the road ahead.

Antão EM, Vincze S, Hanke R, Klimmek L, Suchecka K, Lübke-Becker A, Wieler LH.

Gut Pathog. 2018 Dec 22;10:52. doi: 10.1186/s13099-018-0280-7. eCollection 2018. Review.


Molecular Genetic and Functional Analysis of pks-Harboring, Extra-Intestinal Pathogenic Escherichia coli From India.

Suresh A, Ranjan A, Jadhav S, Hussain A, Shaik S, Alam M, Baddam R, Wieler LH, Ahmed N.

Front Microbiol. 2018 Nov 15;9:2631. doi: 10.3389/fmicb.2018.02631. eCollection 2018.


Determination of virulence and fitness genes associated with the pheU, pheV and selC integration sites of LEE-negative food-borne Shiga toxin-producing Escherichia coli strains.

Saile N, Schuh E, Semmler T, Eichhorn I, Wieler LH, Bauwens A, Schmidt H.

Gut Pathog. 2018 Oct 8;10:43. doi: 10.1186/s13099-018-0271-8. eCollection 2018.


Microevolution of epidemiological highly relevant non-O157 enterohemorrhagic Escherichia coli of serogroups O26 and O111.

Eichhorn I, Semmler T, Mellmann A, Pickard D, Anjum MF, Fruth A, Karch H, Wieler LH.

Int J Med Microbiol. 2018 Dec;308(8):1085-1095. doi: 10.1016/j.ijmm.2018.08.003. Epub 2018 Aug 10.


Smear Microscopy for Diagnosis of Pulmonary Tuberculosis in Eastern Sudan.

Shuaib YA, Khalil EAG, Schaible UE, Wieler LH, Bakheit MAM, Mohamed-Noor SE, Abdalla MA, Homolka S, Andres S, Hillemann D, Lonnroth K, Richter E, Niemann S, Kranzer K.

Tuberc Res Treat. 2018 Jun 14;2018:8038137. doi: 10.1155/2018/8038137. eCollection 2018.


ESBL-plasmid carriage in E. coli enhances in vitro bacterial competition fitness and serum resistance in some strains of pandemic sequence types without overall fitness cost.

Ranjan A, Scholz J, Semmler T, Wieler LH, Ewers C, Müller S, Pickard DJ, Schierack P, Tedin K, Ahmed N, Schaufler K, Guenther S.

Gut Pathog. 2018 Jun 15;10:24. doi: 10.1186/s13099-018-0243-z. eCollection 2018.


Lysogenic conversion of atypical enteropathogenic Escherichia coli (aEPEC) from human, murine, and bovine origin with bacteriophage Φ3538 Δstx2::cat proves their enterohemorrhagic E. coli (EHEC) progeny.

Eichhorn I, Heidemanns K, Ulrich RG, Schmidt H, Semmler T, Fruth A, Bethe A, Goulding D, Pickard D, Karch H, Wieler LH.

Int J Med Microbiol. 2018 Oct;308(7):890-898. doi: 10.1016/j.ijmm.2018.06.005. Epub 2018 Jun 19.


The PGRS Domain of Mycobacterium tuberculosis PE_PGRS Protein Rv0297 Is Involved in Endoplasmic Reticulum Stress-Mediated Apoptosis through Toll-Like Receptor 4.

Grover S, Sharma T, Singh Y, Kohli S, P M, Singh A, Semmler T, Wieler LH, Tedin K, Ehtesham NZ, Hasnain SE.

mBio. 2018 Jun 19;9(3). pii: e01017-18. doi: 10.1128/mBio.01017-18.


Author Correction: Analysis of mutations in pncA reveals non-overlapping patterns among various lineages of Mycobacterium tuberculosis.

Baddam R, Kumar N, Wieler LH, Lankapalli AK, Ahmed N, Peacock SJ, Semmler T.

Sci Rep. 2018 May 15;8(1):7892. doi: 10.1038/s41598-018-25809-7.


[Erratum to: Antibiotic resistance: Complex challenges require comprehensive solutions.]

Wieler LH, Broich K.

Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2018 Jun;61(6):767. doi: 10.1007/s00103-018-2746-7. German. No abstract available.


[Complex challenges require comprehensive solutions].

Wieler LH, Broich K.

Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2018 May;61(5):495-498. doi: 10.1007/s00103-018-2732-0. German. No abstract available. Erratum in: Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2018 May 3;:.


Germany's expanding role in global health.

Wildner M, Wieler LH, Zeeb H; standing committee of the Future Forum Public Health.

Lancet. 2018 Feb 17;391(10121):657. doi: 10.1016/S0140-6736(18)30248-4. No abstract available.


Perceptions and attitudes regarding antibiotic resistance in Germany: a cross-sectoral survey amongst physicians, veterinarians, farmers and the general public.

Schneider S, Salm F, Vincze S, Moeser A, Petruschke I, Schmücker K, Ludwig N, Hanke R, Schröder C, Gropmann A, Behnke M, Lübke-Becker A, Wieler LH, Hagel S, Pletz MW, Gensichen J, Gastmeier P; RAI Study Group.

J Antimicrob Chemother. 2018 Jul 1;73(7):1984-1988. doi: 10.1093/jac/dky100.


Presence of Clostridium difficile in poultry and poultry meat in Egypt.

Abdel-Glil MY, Thomas P, Schmoock G, Abou-El-Azm K, Wieler LH, Neubauer H, Seyboldt C.

Anaerobe. 2018 Jun;51:21-25. doi: 10.1016/j.anaerobe.2018.03.009. Epub 2018 Mar 20.


Analysis of mutations in pncA reveals non-overlapping patterns among various lineages of Mycobacterium tuberculosis.

Baddam R, Kumar N, Wieler LH, Lankapalli AK, Ahmed N, Peacock SJ, Semmler T.

Sci Rep. 2018 Mar 15;8(1):4628. doi: 10.1038/s41598-018-22883-9. Erratum in: Sci Rep. 2018 May 15;8(1):7892.


Clinically Relevant ESBL-Producing K. pneumoniae ST307 and E. coli ST38 in an Urban West African Rat Population.

Schaufler K, Nowak K, Düx A, Semmler T, Villa L, Kourouma L, Bangoura K, Wieler LH, Leendertz FH, Guenther S.

Front Microbiol. 2018 Feb 9;9:150. doi: 10.3389/fmicb.2018.00150. eCollection 2018.


The zoonotic potential of Clostridium difficile from small companion animals and their owners.

Rabold D, Espelage W, Abu Sin M, Eckmanns T, Schneeberg A, Neubauer H, Möbius N, Hille K, Wieler LH, Seyboldt C, Lübke-Becker A.

PLoS One. 2018 Feb 23;13(2):e0193411. doi: 10.1371/journal.pone.0193411. eCollection 2018.


High dietary zinc feeding promotes persistence of multi-resistant E. coli in the swine gut.

Ciesinski L, Guenther S, Pieper R, Kalisch M, Bednorz C, Wieler LH.

PLoS One. 2018 Jan 26;13(1):e0191660. doi: 10.1371/journal.pone.0191660. eCollection 2018.


Risk of Transmission of Antimicrobial Resistant Escherichia coli from Commercial Broiler and Free-Range Retail Chicken in India.

Hussain A, Shaik S, Ranjan A, Nandanwar N, Tiwari SK, Majid M, Baddam R, Qureshi IA, Semmler T, Wieler LH, Islam MA, Chakravortty D, Ahmed N.

Front Microbiol. 2017 Nov 13;8:2120. doi: 10.3389/fmicb.2017.02120. eCollection 2017.


Comparative Genomic Analysis of Globally Dominant ST131 Clone with Other Epidemiologically Successful Extraintestinal Pathogenic Escherichia coli (ExPEC) Lineages.

Shaik S, Ranjan A, Tiwari SK, Hussain A, Nandanwar N, Kumar N, Jadhav S, Semmler T, Baddam R, Islam MA, Alam M, Wieler LH, Watanabe H, Ahmed N.

mBio. 2017 Oct 24;8(5). pii: e01596-17. doi: 10.1128/mBio.01596-17.


Comparative Genomics of Escherichia coli Isolated from Skin and Soft Tissue and Other Extraintestinal Infections.

Ranjan A, Shaik S, Nandanwar N, Hussain A, Tiwari SK, Semmler T, Jadhav S, Wieler LH, Alam M, Colwell RR, Ahmed N.

mBio. 2017 Aug 15;8(4). pii: e01070-17. doi: 10.1128/mBio.01070-17.


Persistent anthrax as a major driver of wildlife mortality in a tropical rainforest.

Hoffmann C, Zimmermann F, Biek R, Kuehl H, Nowak K, Mundry R, Agbor A, Angedakin S, Arandjelovic M, Blankenburg A, Brazolla G, Corogenes K, Couacy-Hymann E, Deschner T, Dieguez P, Dierks K, Düx A, Dupke S, Eshuis H, Formenty P, Yuh YG, Goedmakers A, Gogarten JF, Granjon AC, McGraw S, Grunow R, Hart J, Jones S, Junker J, Kiang J, Langergraber K, Lapuente J, Lee K, Leendertz SA, Léguillon F, Leinert V, Löhrich T, Marrocoli S, Mätz-Rensing K, Meier A, Merkel K, Metzger S, Murai M, Niedorf S, De Nys H, Sachse A, van Schijndel J, Thiesen U, Ton E, Wu D, Wieler LH, Boesch C, Klee SR, Wittig RM, Calvignac-Spencer S, Leendertz FH.

Nature. 2017 Aug 2;548(7665):82-86. doi: 10.1038/nature23309.


First report of two complete Clostridium chauvoei genome sequences and detailed in silico genome analysis.

Thomas P, Semmler T, Eichhorn I, Lübke-Becker A, Werckenthin C, Abdel-Glil MY, Wieler LH, Neubauer H, Seyboldt C.

Infect Genet Evol. 2017 Oct;54:287-298. doi: 10.1016/j.meegid.2017.07.018. Epub 2017 Jul 15.


Highly diverse and antimicrobial susceptible Escherichia coli display a naïve bacterial population in fruit bats from the Republic of Congo.

Nowak K, Fahr J, Weber N, Lübke-Becker A, Semmler T, Weiss S, Mombouli JV, Wieler LH, Guenther S, Leendertz FH, Ewers C.

PLoS One. 2017 Jul 12;12(7):e0178146. doi: 10.1371/journal.pone.0178146. eCollection 2017.


Evidence for Contemporary Switching of the O-Antigen Gene Cluster between Shiga Toxin-Producing Escherichia coli Strains Colonizing Cattle.

Geue L, Menge C, Eichhorn I, Semmler T, Wieler LH, Pickard D, Berens C, Barth SA.

Front Microbiol. 2017 Mar 21;8:424. doi: 10.3389/fmicb.2017.00424. eCollection 2017.


SLIMM: species level identification of microorganisms from metagenomes.

Dadi TH, Renard BY, Wieler LH, Semmler T, Reinert K.

PeerJ. 2017 Mar 28;5:e3138. doi: 10.7717/peerj.3138. eCollection 2017.


Chromosomally encoded ESBL genes in Escherichia coli of ST38 from Mongolian wild birds.

Guenther S, Semmler T, Stubbe A, Stubbe M, Wieler LH, Schaufler K.

J Antimicrob Chemother. 2017 May 1;72(5):1310-1313. doi: 10.1093/jac/dkx006.


Effects of Ex Vivo Infection with ETEC on Jejunal Barrier Properties and Cytokine Expression in Probiotic-Supplemented Pigs.

Lodemann U, Amasheh S, Radloff J, Kern M, Bethe A, Wieler LH, Pieper R, Zentek J, Aschenbach JR.

Dig Dis Sci. 2017 Apr;62(4):922-933. doi: 10.1007/s10620-016-4413-x. Epub 2016 Dec 19.


[Public Health: Setting Goals, Establishing Structures and Improving Health for All].

Dragano N, Gerhardus A, Kurth BM, Kurth T, Razum O, Stang A, Teichert U, Wieler LH, Wildner M, Zeeb H.

Gesundheitswesen. 2016 Nov;78(11):686-688. Epub 2016 Oct 18. Review. German.


Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations.

McNally A, Oren Y, Kelly D, Pascoe B, Dunn S, Sreecharan T, Vehkala M, Välimäki N, Prentice MB, Ashour A, Avram O, Pupko T, Dobrindt U, Literak I, Guenther S, Schaufler K, Wieler LH, Zhiyong Z, Sheppard SK, McInerney JO, Corander J.

PLoS Genet. 2016 Sep 12;12(9):e1006280. doi: 10.1371/journal.pgen.1006280. eCollection 2016 Sep.


Molecular Epidemiology and Genome Dynamics of New Delhi Metallo-β-Lactamase-Producing Extraintestinal Pathogenic Escherichia coli Strains from India.

Ranjan A, Shaik S, Mondal A, Nandanwar N, Hussain A, Semmler T, Kumar N, Tiwari SK, Jadhav S, Wieler LH, Ahmed N.

Antimicrob Agents Chemother. 2016 Oct 21;60(11):6795-6805. doi: 10.1128/AAC.01345-16. Print 2016 Nov.


Beta-hemolytic Streptococcus dysgalactiae strains isolated from horses are a genetically distinct population within the Streptococcus dysgalactiae taxon.

Pinho MD, Erol E, Ribeiro-Gonçalves B, Mendes CI, Carriço JA, Matos SC, Preziuso S, Luebke-Becker A, Wieler LH, Melo-Cristino J, Ramirez M.

Sci Rep. 2016 Aug 17;6:31736. doi: 10.1038/srep31736.


The Accessory Genome of Shiga Toxin-Producing Escherichia coli Defines a Persistent Colonization Type in Cattle.

Barth SA, Menge C, Eichhorn I, Semmler T, Wieler LH, Pickard D, Belka A, Berens C, Geue L.

Appl Environ Microbiol. 2016 Aug 15;82(17):5455-64. doi: 10.1128/AEM.00909-16. Print 2016 Sep 1.


Clostridium botulinum type D/C intoxication in a dairy cow stock in Saxony-Anhalt (Germany)--report on an innovative diagnostic approach.

Dlabola J, Hashish E, Pauly B, Kubisiak B, Behm I, Heseler R, Schliephake A, Wieler LH, Neubauer H, Seyboldt C.

Berl Munch Tierarztl Wochenschr. 2016 Mar-Apr;129(3-4):111-7.


Carriage of Extended-Spectrum Beta-Lactamase-Plasmids Does Not Reduce Fitness but Enhances Virulence in Some Strains of Pandemic E. coli Lineages.

Schaufler K, Semmler T, Pickard DJ, de Toro M, de la Cruz F, Wieler LH, Ewers C, Guenther S.

Front Microbiol. 2016 Mar 17;7:336. doi: 10.3389/fmicb.2016.00336. eCollection 2016.


High carriage rate of ESBL-producing Enterobacteriaceae at presentation and follow-up among travellers with gastrointestinal complaints returning from India and Southeast Asia.

Barreto Miranda I, Ignatius R, Pfüller R, Friedrich-Jänicke B, Steiner F, Paland M, Dieckmann S, Schaufler K, Wieler LH, Guenther S, Mockenhaupt FP.

J Travel Med. 2016 Feb 8;23(2):tav024. doi: 10.1093/jtm/tav024. Print 2016 Feb.


A Look into the Melting Pot: The mecC-Harboring Region Is a Recombination Hot Spot in Staphylococcus stepanovicii.

Semmler T, Harrison EM, Lübke-Becker A, Ulrich RG, Wieler LH, Guenther S, Stamm I, Hanssen AM, Holmes MA, Vincze S, Walther B.

PLoS One. 2016 Jan 22;11(1):e0147150. doi: 10.1371/journal.pone.0147150. eCollection 2016.


[Modern immunization strategy and immunomodulation in domestic animal medicine].

Wieler LH.

Berl Munch Tierarztl Wochenschr. 2015 Nov-Dec;128(11-12):433. German. No abstract available.


Clonal spread and interspecies transmission of clinically relevant ESBL-producing Escherichia coli of ST410--another successful pandemic clone?

Schaufler K, Semmler T, Wieler LH, Wöhrmann M, Baddam R, Ahmed N, Müller K, Kola A, Fruth A, Ewers C, Guenther S.

FEMS Microbiol Ecol. 2016 Jan;92(1). pii: fiv155. doi: 10.1093/femsec/fiv155. Epub 2015 Dec 9.


[Multidrug-resistant bacteria in Germany. The impact of sources outside healthcare facilities].

Idelevich EA, Lanckohr C, Horn D, Wieler LH, Becker K, Köck R.

Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2016 Jan;59(1):113-23. doi: 10.1007/s00103-015-2261-z. Review. German.


Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri.

Connor TR, Barker CR, Baker KS, Weill FX, Talukder KA, Smith AM, Baker S, Gouali M, Pham Thanh D, Jahan Azmi I, Dias da Silveira W, Semmler T, Wieler LH, Jenkins C, Cravioto A, Faruque SM, Parkhill J, Wook Kim D, Keddy KH, Thomson NR.

Elife. 2015 Aug 4;4:e07335. doi: 10.7554/eLife.07335.

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