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A PUF Hub Drives Self-Renewal in Caenorhabditis elegans Germline Stem Cells.

Haupt KA, Law KT, Enright AL, Kanzler CR, Shin H, Wickens M, Kimble J.

Genetics. 2020 Jan;214(1):147-161. doi: 10.1534/genetics.119.302772. Epub 2019 Nov 18.


The molecular basis of LST-1 self-renewal activity and its control of stem cell pool size.

Haupt KA, Enright AL, Ferdous AS, Kershner AM, Shin H, Wickens M, Kimble J.

Development. 2019 Oct 17;146(20). pii: dev181644. doi: 10.1242/dev.181644.


Overview of paediatric tuberculosis cases treated in the Sydney Children's Hospitals Network, Australia.

Al Yazidi LS, Marais BJ, Wickens M, Palasanthiran P, Isaacs D, Outhred A, McMullan B, Britton PN.

Public Health Res Pract. 2019 Jul 31;29(2). pii: 282318076. doi: 10.17061/phrp28231807.


Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.

Qiu C, Dutcher RC, Porter DF, Arava Y, Wickens M, Hall TMT.

Nucleic Acids Res. 2019 Sep 19;47(16):8770-8784. doi: 10.1093/nar/gkz583.


Glutamate receptor interacting protein acts within the prefrontal cortex to blunt cocaine seeking.

Wickens MM, Deutschmann AU, McGrath AG, Parikh V, Briand LA.

Neuropharmacology. 2019 Oct;157:107672. doi: 10.1016/j.neuropharm.2019.107672. Epub 2019 Jun 21.


Unbiased screen of RNA tailing activities reveals a poly(UG) polymerase.

Preston MA, Porter DF, Chen F, Buter N, Lapointe CP, Keles S, Kimble J, Wickens M.

Nat Methods. 2019 May;16(5):437-445. doi: 10.1038/s41592-019-0370-6. Epub 2019 Apr 15.


Engineering a conserved RNA regulatory protein repurposes its biological function in vivo.

Bhat VD, McCann KL, Wang Y, Fonseca DR, Shukla T, Alexander JC, Qiu C, Wickens M, Lo TW, Tanaka Hall TM, Campbell ZT.

Elife. 2019 Jan 17;8. pii: e43788. doi: 10.7554/eLife.43788.


Toward Identifying Subnetworks from FBF Binding Landscapes in Caenorhabditis Spermatogenic or Oogenic Germlines.

Porter DF, Prasad A, Carrick BH, Kroll-Connor P, Wickens M, Kimble J.

G3 (Bethesda). 2019 Jan 9;9(1):153-165. doi: 10.1534/g3.118.200300.


Individual differences in working memory and general intelligence indexed by P200 and P300: A latent variable model.

Wongupparaj P, Sumich A, Wickens M, Kumari V, Morris RG.

Biol Psychol. 2018 Nov;139:96-105. doi: 10.1016/j.biopsycho.2018.10.009. Epub 2018 Oct 28.


An RNA-Binding Multimer Specifies Nematode Sperm Fate.

Aoki ST, Porter DF, Prasad A, Wickens M, Bingman CA, Kimble J.

Cell Rep. 2018 Jun 26;23(13):3769-3775. doi: 10.1016/j.celrep.2018.05.095.


Sex Differences in Psychiatric Disease: A Focus on the Glutamate System.

Wickens MM, Bangasser DA, Briand LA.

Front Mol Neurosci. 2018 Jun 5;11:197. doi: 10.3389/fnmol.2018.00197. eCollection 2018. Review.


Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis.

Lapointe CP, Stefely JA, Jochem A, Hutchins PD, Wilson GM, Kwiecien NW, Coon JJ, Wickens M, Pagliarini DJ.

Cell Syst. 2018 Jan 24;6(1):125-135.e6. doi: 10.1016/j.cels.2017.11.012. Epub 2017 Dec 13.


SYGL-1 and LST-1 link niche signaling to PUF RNA repression for stem cell maintenance in Caenorhabditis elegans.

Shin H, Haupt KA, Kershner AM, Kroll-Conner P, Wickens M, Kimble J.

PLoS Genet. 2017 Dec 12;13(12):e1007121. doi: 10.1371/journal.pgen.1007121. eCollection 2017 Dec.


Reply to Hogan: Direct evidence of RNA-protein interactions and rewiring.

Wilinski D, Buter N, Klocko AD, Lapointe CP, Selker EU, Gasch AP, Wickens M.

Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):E10854-E10855. doi: 10.1073/pnas.1717585114. Epub 2017 Dec 5. No abstract available.


Pupil Dilation May Affect Retinal Vessel Caliber Measures.

Wang JJ, Shi Y, Xie J, Tan AG, Hogdson LA, Lee S, Wickens M, Cosatto VF, Kairaitis K, Lindley R, Lim LL, Mitchell P, Wheatley JR, Amis TC.

Ophthalmic Epidemiol. 2018 Jun;25(3):234-237. doi: 10.1080/09286586.2017.1409360. Epub 2017 Nov 29.


RNA Tagging: Preparation of High-Throughput Sequencing Libraries.

Lapointe CP, Wickens M.

Methods Mol Biol. 2018;1649:455-471. doi: 10.1007/978-1-4939-7213-5_30.


Architecture and dynamics of overlapped RNA regulatory networks.

Lapointe CP, Preston MA, Wilinski D, Saunders HAJ, Campbell ZT, Wickens M.

RNA. 2017 Nov;23(11):1636-1647. doi: 10.1261/rna.062687.117. Epub 2017 Aug 2.


Recurrent rewiring and emergence of RNA regulatory networks.

Wilinski D, Buter N, Klocko AD, Lapointe CP, Selker EU, Gasch AP, Wickens M.

Proc Natl Acad Sci U S A. 2017 Apr 4;114(14):E2816-E2825. doi: 10.1073/pnas.1617777114. Epub 2017 Mar 20.


The PUF binding landscape in metazoan germ cells.

Prasad A, Porter DF, Kroll-Conner PL, Mohanty I, Ryan AR, Crittenden SL, Wickens M, Kimble J.

RNA. 2016 Jul;22(7):1026-43. doi: 10.1261/rna.055871.116. Epub 2016 May 10.


PGL germ granule assembly protein is a base-specific, single-stranded RNase.

Aoki ST, Kershner AM, Bingman CA, Wickens M, Kimble J.

Proc Natl Acad Sci U S A. 2016 Feb 2;113(5):1279-84. doi: 10.1073/pnas.1524400113. Epub 2016 Jan 19.


Target selection by natural and redesigned PUF proteins.

Porter DF, Koh YY, VanVeller B, Raines RT, Wickens M.

Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):15868-73. doi: 10.1073/pnas.1508501112. Epub 2015 Dec 14.


Protein-RNA networks revealed through covalent RNA marks.

Lapointe CP, Wilinski D, Saunders HA, Wickens M.

Nat Methods. 2015 Dec;12(12):1163-70. doi: 10.1038/nmeth.3651. Epub 2015 Nov 2.


RNA regulatory networks diversified through curvature of the PUF protein scaffold.

Wilinski D, Qiu C, Lapointe CP, Nevil M, Campbell ZT, Tanaka Hall TM, Wickens M.

Nat Commun. 2015 Sep 14;6:8213. doi: 10.1038/ncomms9213.


Xenopus CAF1 requires NOT1-mediated interaction with 4E-T to repress translation in vivo.

Waghray S, Williams C, Coon JJ, Wickens M.

RNA. 2015 Jul;21(7):1335-45. doi: 10.1261/rna.051565.115. Epub 2015 May 26.


Lessons from the RNA World: humility and hubris.

Wickens M.

RNA. 2015 Apr;21(4):482. doi: 10.1261/rna.050963.115. No abstract available.


Probing RNA-protein networks: biochemistry meets genomics.

Campbell ZT, Wickens M.

Trends Biochem Sci. 2015 Mar;40(3):157-64. doi: 10.1016/j.tibs.2015.01.003. Epub 2015 Jan 27. Review.


A protein-RNA specificity code enables targeted activation of an endogenous human transcript.

Campbell ZT, Valley CT, Wickens M.

Nat Struct Mol Biol. 2014 Aug;21(8):732-8. doi: 10.1038/nsmb.2847. Epub 2014 Jun 29.


Identifying proteins that bind a known RNA sequence using the yeast three-hybrid system.

Koh YY, Wickens M.

Methods Enzymol. 2014;539:195-214. doi: 10.1016/B978-0-12-420120-0.00011-6.


Dissecting a known RNA-protein interaction using a yeast three-hybrid system.

Koh YY, Wickens M.

Methods Enzymol. 2014;539:183-93. doi: 10.1016/B978-0-12-420120-0.00010-4.


Determining the RNA specificity and targets of RNA-binding proteins using a three-hybrid system.

Koh YY, Wickens M.

Methods Enzymol. 2014;539:163-81. doi: 10.1016/B978-0-12-420120-0.00009-8.


Translation of human tissue factor pathway inhibitor-β mRNA is controlled by alternative splicing within the 5' untranslated region.

Ellery PE, Maroney SA, Martinez ND, Wickens MP, Mast AE.

Arterioscler Thromb Vasc Biol. 2014 Jan;34(1):187-95. doi: 10.1161/ATVBAHA.113.302660. Epub 2013 Nov 14.


Bicaudal-C spatially controls translation of vertebrate maternal mRNAs.

Zhang Y, Cooke A, Park S, Dewey CN, Wickens M, Sheets MD.

RNA. 2013 Nov;19(11):1575-82. doi: 10.1261/rna.041665.113. Epub 2013 Sep 23.


The nucleic acid-binding domain and translational repression activity of a Xenopus terminal uridylyl transferase.

Lapointe CP, Wickens M.

J Biol Chem. 2013 Jul 12;288(28):20723-33. doi: 10.1074/jbc.M113.455451. Epub 2013 May 24.


RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans.

LeGendre JB, Campbell ZT, Kroll-Conner P, Anderson P, Kimble J, Wickens M.

J Biol Chem. 2013 Jan 25;288(4):2532-45. doi: 10.1074/jbc.M112.397349. Epub 2012 Nov 29.


A protein.protein interaction platform involved in recruitment of GLD-3 to the FBF.fem-3 mRNA complex.

Wu J, Campbell ZT, Menichelli E, Wickens M, Williamson JR.

J Mol Biol. 2013 Feb 22;425(4):738-54. doi: 10.1016/j.jmb.2012.11.013. Epub 2012 Nov 15.


Biochemical characterization of the Caenorhabditis elegans FBF.CPB-1 translational regulation complex identifies conserved protein interaction hotspots.

Menichelli E, Wu J, Campbell ZT, Wickens M, Williamson JR.

J Mol Biol. 2013 Feb 22;425(4):725-37. doi: 10.1016/j.jmb.2012.11.012. Epub 2012 Nov 15.


Cooperativity in RNA-protein interactions: global analysis of RNA binding specificity.

Campbell ZT, Bhimsaria D, Valley CT, Rodriguez-Martinez JA, Menichelli E, Williamson JR, Ansari AZ, Wickens M.

Cell Rep. 2012 May 31;1(5):570-81.


Identification of a conserved interface between PUF and CPEB proteins.

Campbell ZT, Menichelli E, Friend K, Wu J, Kimble J, Williamson JR, Wickens M.

J Biol Chem. 2012 May 25;287(22):18854-62. doi: 10.1074/jbc.M112.352815. Epub 2012 Apr 11.


Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site.

Valley CT, Porter DF, Qiu C, Campbell ZT, Hall TM, Wickens M.

Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6054-9. doi: 10.1073/pnas.1200521109. Epub 2012 Mar 30.


Context-dependent function of a conserved translational regulatory module.

Liu Q, Stumpf C, Thomas C, Wickens M, Haag ES.

Development. 2012 Apr;139(8):1509-21. doi: 10.1242/dev.070128. Epub 2012 Mar 7.


Time of day regulates subcellular trafficking, tripartite synaptic localization, and polyadenylation of the astrocytic Fabp7 mRNA.

Gerstner JR, Vanderheyden WM, LaVaute T, Westmark CJ, Rouhana L, Pack AI, Wickens M, Landry CF.

J Neurosci. 2012 Jan 25;32(4):1383-94. doi: 10.1523/JNEUROSCI.3228-11.2012.


A conserved PUF-Ago-eEF1A complex attenuates translation elongation.

Friend K, Campbell ZT, Cooke A, Kroll-Conner P, Wickens MP, Kimble J.

Nat Struct Mol Biol. 2012 Jan 8;19(2):176-83. doi: 10.1038/nsmb.2214.


Divergence of Pumilio/fem-3 mRNA binding factor (PUF) protein specificity through variations in an RNA-binding pocket.

Qiu C, Kershner A, Wang Y, Holley CP, Wilinski D, Keles S, Kimble J, Wickens M, Hall TM.

J Biol Chem. 2012 Feb 24;287(9):6949-57. doi: 10.1074/jbc.M111.326264. Epub 2011 Dec 28.


Phase II, open-label, randomized, multicenter study comparing the efficacy and safety of olaparib, a poly (ADP-ribose) polymerase inhibitor, and pegylated liposomal doxorubicin in patients with BRCA1 or BRCA2 mutations and recurrent ovarian cancer.

Kaye SB, Lubinski J, Matulonis U, Ang JE, Gourley C, Karlan BY, Amnon A, Bell-McGuinn KM, Chen LM, Friedlander M, Safra T, Vergote I, Wickens M, Lowe ES, Carmichael J, Kaufman B.

J Clin Oncol. 2012 Feb 1;30(4):372-9. doi: 10.1200/JCO.2011.36.9215. Epub 2011 Dec 27.


Targeted translational regulation using the PUF protein family scaffold.

Cooke A, Prigge A, Opperman L, Wickens M.

Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15870-5. doi: 10.1073/pnas.1105151108. Epub 2011 Sep 12.


A role for the poly(A)-binding protein Pab1p in PUF protein-mediated repression.

Chritton JJ, Wickens M.

J Biol Chem. 2011 Sep 23;286(38):33268-78. doi: 10.1074/jbc.M111.264572. Epub 2011 Jul 15.


Divergent RNA binding specificity of yeast Puf2p.

Yosefzon Y, Koh YY, Chritton JJ, Lande A, Leibovich L, Barziv L, Petzold C, Yakhini Z, Mandel-Gutfreund Y, Wickens M, Arava Y.

RNA. 2011 Aug;17(8):1479-88. doi: 10.1261/rna.2700311. Epub 2011 Jun 17.


Stacking interactions in PUF-RNA complexes.

Koh YY, Wang Y, Qiu C, Opperman L, Gross L, Tanaka Hall TM, Wickens M.

RNA. 2011 Apr;17(4):718-27. doi: 10.1261/rna.2540311. Epub 2011 Mar 3.


Bcl-2 and β1-integrin predict survival in a tissue microarray of small cell lung cancer.

Lawson MH, Cummings NM, Rassl DM, Vowler SL, Wickens M, Howat WJ, Brenton JD, Murphy G, Rintoul RC.

Br J Cancer. 2010 Nov 23;103(11):1710-5. doi: 10.1038/sj.bjc.6605950. Epub 2010 Nov 9.


Translational repression by deadenylases.

Cooke A, Prigge A, Wickens M.

J Biol Chem. 2010 Sep 10;285(37):28506-13. doi: 10.1074/jbc.M110.150763. Epub 2010 Jul 15.

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