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Items: 35

1.

The Plastisphere - Uncovering tightly attached plastic "specific" microorganisms.

Kirstein IV, Wichels A, Gullans E, Krohne G, Gerdts G.

PLoS One. 2019 Apr 23;14(4):e0215859. doi: 10.1371/journal.pone.0215859. eCollection 2019.

2.

Mature biofilm communities on synthetic polymers in seawater - Specific or general?

Kirstein IV, Wichels A, Krohne G, Gerdts G.

Mar Environ Res. 2018 Nov;142:147-154. doi: 10.1016/j.marenvres.2018.09.028. Epub 2018 Oct 2.

PMID:
30337052
3.

The North Sea goes viral: Occurrence and distribution of North Sea bacteriophages.

Garin-Fernandez A, Pereira-Flores E, Glöckner FO, Wichels A.

Mar Genomics. 2018 Oct;41:31-41. doi: 10.1016/j.margen.2018.05.004. Epub 2018 Jun 1.

4.

Comparative Omics and Trait Analyses of Marine Pseudoalteromonas Phages Advance the Phage OTU Concept.

Duhaime MB, Solonenko N, Roux S, Verberkmoes NC, Wichels A, Sullivan MB.

Front Microbiol. 2017 Jul 6;8:1241. doi: 10.3389/fmicb.2017.01241. eCollection 2017.

5.

Combined Carbohydrates Support Rich Communities of Particle-Associated Marine Bacterioplankton.

Sperling M, Piontek J, Engel A, Wiltshire KH, Niggemann J, Gerdts G, Wichels A.

Front Microbiol. 2017 Jan 31;8:65. doi: 10.3389/fmicb.2017.00065. eCollection 2017.

6.

Dangerous hitchhikers? Evidence for potentially pathogenic Vibrio spp. on microplastic particles.

Kirstein IV, Kirmizi S, Wichels A, Garin-Fernandez A, Erler R, Löder M, Gerdts G.

Mar Environ Res. 2016 Sep;120:1-8. doi: 10.1016/j.marenvres.2016.07.004. Epub 2016 Jul 5.

PMID:
27411093
7.

Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms.

Teeling H, Fuchs BM, Bennke CM, Krüger K, Chafee M, Kappelmann L, Reintjes G, Waldmann J, Quast C, Glöckner FO, Lucas J, Wichels A, Gerdts G, Wiltshire KH, Amann RI.

Elife. 2016 Apr 7;5:e11888. doi: 10.7554/eLife.11888.

8.

Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level.

Lucas J, Koester I, Wichels A, Niggemann J, Dittmar T, Callies U, Wiltshire KH, Gerdts G.

Front Microbiol. 2016 Mar 15;7:321. doi: 10.3389/fmicb.2016.00321. eCollection 2016.

9.

Six Pseudoalteromonas Strains Isolated from Surface Waters of Kabeltonne, Offshore Helgoland, North Sea.

Duhaime MB, Wichels A, Sullivan MB.

Genome Announc. 2016 Feb 11;4(1). pii: e01697-15. doi: 10.1128/genomeA.01697-15.

10.

Annual dynamics of North Sea bacterioplankton: seasonal variability superimposes short-term variation.

Lucas J, Wichels A, Teeling H, Chafee M, Scharfe M, Gerdts G.

FEMS Microbiol Ecol. 2015 Sep;91(9):fiv099. doi: 10.1093/femsec/fiv099. Epub 2015 Aug 21.

PMID:
26298013
11.

The ocean sampling day consortium.

Kopf A, Bicak M, Kottmann R, Schnetzer J, Kostadinov I, Lehmann K, Fernandez-Guerra A, Jeanthon C, Rahav E, Ullrich M, Wichels A, Gerdts G, Polymenakou P, Kotoulas G, Siam R, Abdallah RZ, Sonnenschein EC, Cariou T, O'Gara F, Jackson S, Orlic S, Steinke M, Busch J, Duarte B, Caçador I, Canning-Clode J, Bobrova O, Marteinsson V, Reynisson E, Loureiro CM, Luna GM, Quero GM, Löscher CR, Kremp A, DeLorenzo ME, Øvreås L, Tolman J, LaRoche J, Penna A, Frischer M, Davis T, Katherine B, Meyer CP, Ramos S, Magalhães C, Jude-Lemeilleur F, Aguirre-Macedo ML, Wang S, Poulton N, Jones S, Collin R, Fuhrman JA, Conan P, Alonso C, Stambler N, Goodwin K, Yakimov MM, Baltar F, Bodrossy L, Van De Kamp J, Frampton DM, Ostrowski M, Van Ruth P, Malthouse P, Claus S, Deneudt K, Mortelmans J, Pitois S, Wallom D, Salter I, Costa R, Schroeder DC, Kandil MM, Amaral V, Biancalana F, Santana R, Pedrotti ML, Yoshida T, Ogata H, Ingleton T, Munnik K, Rodriguez-Ezpeleta N, Berteaux-Lecellier V, Wecker P, Cancio I, Vaulot D, Bienhold C, Ghazal H, Chaouni B, Essayeh S, Ettamimi S, Zaid el H, Boukhatem N, Bouali A, Chahboune R, Barrijal S, Timinouni M, El Otmani F, Bennani M, Mea M, Todorova N, Karamfilov V, Ten Hoopen P, Cochrane G, L'Haridon S, Bizsel KC, Vezzi A, Lauro FM, Martin P, Jensen RM, Hinks J, Gebbels S, Rosselli R, De Pascale F, Schiavon R, Dos Santos A, Villar E, Pesant S, Cataletto B, Malfatti F, Edirisinghe R, Silveira JA, Barbier M, Turk V, Tinta T, Fuller WJ, Salihoglu I, Serakinci N, Ergoren MC, Bresnan E, Iriberri J, Nyhus PA, Bente E, Karlsen HE, Golyshin PN, Gasol JM, Moncheva S, Dzhembekova N, Johnson Z, Sinigalliano CD, Gidley ML, Zingone A, Danovaro R, Tsiamis G, Clark MS, Costa AC, El Bour M, Martins AM, Collins RE, Ducluzeau AL, Martinez J, Costello MJ, Amaral-Zettler LA, Gilbert JA, Davies N, Field D, Glöckner FO.

Gigascience. 2015 Jun 19;4:27. doi: 10.1186/s13742-015-0066-5. eCollection 2015.

12.

Spatial distribution of marine airborne bacterial communities.

Seifried JS, Wichels A, Gerdts G.

Microbiologyopen. 2015 Jun;4(3):475-90. doi: 10.1002/mbo3.253. Epub 2015 Mar 19.

13.

Bacterial communities associated with four ctenophore genera from the German Bight (North Sea).

Hao W, Gerdts G, Peplies J, Wichels A.

FEMS Microbiol Ecol. 2015 Jan;91(1):1-11. doi: 10.1093/femsec/fiu006. Epub 2014 Dec 5.

14.

Metatranscriptome of marine bacterioplankton during winter time in the North Sea assessed by total RNA sequencing.

Kopf A, Kostadinov I, Wichels A, Quast C, Glöckner FO.

Mar Genomics. 2015 Feb;19:45-6. doi: 10.1016/j.margen.2014.11.001. Epub 2014 Nov 15.

15.

VibrioBase: A MALDI-TOF MS database for fast identification of Vibrio spp. that are potentially pathogenic in humans.

Erler R, Wichels A, Heinemeyer EA, Hauk G, Hippelein M, Reyes NT, Gerdts G.

Syst Appl Microbiol. 2015 Feb;38(1):16-25. doi: 10.1016/j.syapm.2014.10.009. Epub 2014 Nov 8.

PMID:
25466918
16.

Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing.

Klindworth A, Mann AJ, Huang S, Wichels A, Quast C, Waldmann J, Teeling H, Glöckner FO.

Mar Genomics. 2014 Dec;18 Pt B:185-92. doi: 10.1016/j.margen.2014.08.007. Epub 2014 Sep 6.

17.

The founding charter of the Genomic Observatories Network.

Davies N, Field D, Amaral-Zettler L, Clark MS, Deck J, Drummond A, Faith DP, Geller J, Gilbert J, Glöckner FO, Hirsch PR, Leong JA, Meyer C, Obst M, Planes S, Scholin C, Vogler AP, Gates RD, Toonen R, Berteaux-Lecellier V, Barbier M, Barker K, Bertilsson S, Bicak M, Bietz MJ, Bobe J, Bodrossy L, Borja A, Coddington J, Fuhrman J, Gerdts G, Gillespie R, Goodwin K, Hanson PC, Hero JM, Hoekman D, Jansson J, Jeanthon C, Kao R, Klindworth A, Knight R, Kottmann R, Koo MS, Kotoulas G, Lowe AJ, Marteinsson VT, Meyer F, Morrison N, Myrold DD, Pafilis E, Parker S, Parnell JJ, Polymenakou PN, Ratnasingham S, Roderick GK, Rodriguez-Ezpeleta N, Schonrogge K, Simon N, Valette-Silver NJ, Springer YP, Stone GN, Stones-Havas S, Sansone SA, Thibault KM, Wecker P, Wichels A, Wooley JC, Yahara T, Zingone A; GOs-COS.

Gigascience. 2014 Mar 7;3(1):2. doi: 10.1186/2047-217X-3-2.

18.

Geo-Chip analysis reveals reduced functional diversity of the bacterial community at a dumping site for dredged Elbe sediment.

Störmer R, Wichels A, Gerdts G.

Mar Pollut Bull. 2013 Dec 15;77(1-2):113-22. doi: 10.1016/j.marpolbul.2013.10.022. Epub 2013 Nov 11.

PMID:
24229782
19.

Distinct seasonal growth patterns of the bacterium Planktotalea frisia in the North Sea and specific interaction with phytoplankton algae.

Hahnke S, Sperling M, Langer T, Wichels A, Gerdts G, Beardsley C, Brinkhoff T, Simon M.

FEMS Microbiol Ecol. 2013 Nov;86(2):185-99. doi: 10.1111/1574-6941.12151. Epub 2013 Jun 19.

20.

Small changes in pH have direct effects on marine bacterial community composition: a microcosm approach.

Krause E, Wichels A, Giménez L, Lunau M, Schilhabel MB, Gerdts G.

PLoS One. 2012;7(10):e47035. doi: 10.1371/journal.pone.0047035. Epub 2012 Oct 11.

21.

Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom.

Teeling H, Fuchs BM, Becher D, Klockow C, Gardebrecht A, Bennke CM, Kassabgy M, Huang S, Mann AJ, Waldmann J, Weber M, Klindworth A, Otto A, Lange J, Bernhardt J, Reinsch C, Hecker M, Peplies J, Bockelmann FD, Callies U, Gerdts G, Wichels A, Wiltshire KH, Glöckner FO, Schweder T, Amann R.

Science. 2012 May 4;336(6081):608-11. doi: 10.1126/science.1218344.

22.

Seasonal dynamics and modeling of a Vibrio community in coastal waters of the North Sea.

Oberbeckmann S, Fuchs BM, Meiners M, Wichels A, Wiltshire KH, Gerdts G.

Microb Ecol. 2012 Apr;63(3):543-51. doi: 10.1007/s00248-011-9990-9. Epub 2011 Dec 28.

PMID:
22202887
23.

Temporal variability of coastal Planctomycetes clades at Kabeltonne station, North Sea.

Pizzetti I, Fuchs BM, Gerdts G, Wichels A, Wiltshire KH, Amann R.

Appl Environ Microbiol. 2011 Jul;77(14):5009-17. doi: 10.1128/AEM.02931-10. Epub 2011 Jun 3.

24.

Occurrence of Vibrio parahaemolyticus and Vibrio alginolyticus in the German Bight over a seasonal cycle.

Oberbeckmann S, Wichels A, Wiltshire KH, Gerdts G.

Antonie Van Leeuwenhoek. 2011 Aug;100(2):291-307. doi: 10.1007/s10482-011-9586-x. Epub 2011 May 20.

PMID:
21598011
25.

Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.

Weber M, Teeling H, Huang S, Waldmann J, Kassabgy M, Fuchs BM, Klindworth A, Klockow C, Wichels A, Gerdts G, Amann R, Glöckner FO.

ISME J. 2011 May;5(5):918-28. doi: 10.1038/ismej.2010.180. Epub 2010 Dec 16.

26.

A polyphasic approach for the differentiation of environmental Vibrio isolates from temperate waters.

Oberbeckmann S, Wichels A, Maier T, Kostrzewa M, Raffelberg S, Gerdts G.

FEMS Microbiol Ecol. 2011 Jan;75(1):145-62. doi: 10.1111/j.1574-6941.2010.00998.x. Epub 2010 Nov 30.

27.

Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1.

Duhaime MB, Wichels A, Waldmann J, Teeling H, Glöckner FO.

ISME J. 2011 Jan;5(1):107-21. doi: 10.1038/ismej.2010.94. Epub 2010 Jul 8.

28.

Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsin-producing microbial community in the North Sea.

Riedel T, Tomasch J, Buchholz I, Jacobs J, Kollenberg M, Gerdts G, Wichels A, Brinkhoff T, Cypionka H, Wagner-Döbler I.

Appl Environ Microbiol. 2010 May;76(10):3187-97. doi: 10.1128/AEM.02971-09. Epub 2010 Mar 19.

29.

The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea.

Wagner-Döbler I, Ballhausen B, Berger M, Brinkhoff T, Buchholz I, Bunk B, Cypionka H, Daniel R, Drepper T, Gerdts G, Hahnke S, Han C, Jahn D, Kalhoefer D, Kiss H, Klenk HP, Kyrpides N, Liebl W, Liesegang H, Meincke L, Pati A, Petersen J, Piekarski T, Pommerenke C, Pradella S, Pukall R, Rabus R, Stackebrandt E, Thole S, Thompson L, Tielen P, Tomasch J, von Jan M, Wanphrut N, Wichels A, Zech H, Simon M.

ISME J. 2010 Jan;4(1):61-77. doi: 10.1038/ismej.2009.94. Epub 2009 Sep 10.

PMID:
19741735
30.

Bacterial community dynamics during the winter-spring transition in the North Sea.

Sapp M, Wichels A, Wiltshire KH, Gerdts G.

FEMS Microbiol Ecol. 2007 Mar;59(3):622-37.

31.

Impacts of cultivation of marine diatoms on the associated bacterial community.

Sapp M, Wichels A, Gerdts G.

Appl Environ Microbiol. 2007 May;73(9):3117-20. Epub 2007 Mar 16.

32.

Species-specific bacterial communities in the phycosphere of microalgae?

Sapp M, Schwaderer AS, Wiltshire KH, Hoppe HG, Gerdts G, Wichels A.

Microb Ecol. 2007 May;53(4):683-99. Epub 2007 Jan 31.

PMID:
17264999
33.

Bacterial diversity in the breadcrumb sponge Halichondria panicea (Pallas).

Wichels A, Würtz S, Döpke H, Schütt C, Gerdts G.

FEMS Microbiol Ecol. 2006 Apr;56(1):102-18.

34.

Bacteriophage diversity in the North Sea.

Wichels A, Biel SS, Gelderblom HR, Brinkhoff T, Muyzer G, Schütt C.

Appl Environ Microbiol. 1998 Nov;64(11):4128-33.

35.

Neuroactive compounds produced by bacteria from the marine sponge Halichondria panicea: activation of the neuronal NMDA receptor.

Perovic S, Wichels A, Schütt C, Gerdts G, Pahler S, Steffen R, Müller WE.

Environ Toxicol Pharmacol. 1998 Oct;6(2):125-33.

PMID:
21781889

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