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Items: 1 to 50 of 57

1.

Microbial niches in raw ingredients determine microbial community assembly during kimchi fermentation.

Song HS, Whon TW, Kim J, Lee SH, Kim JY, Kim YB, Choi HJ, Rhee JK, Roh SW.

Food Chem. 2020 Jul 15;318:126481. doi: 10.1016/j.foodchem.2020.126481. Epub 2020 Feb 25.

PMID:
32126467
2.

Tabrizicola piscis sp. nov., isolated from the intestinal tract of a Korean indigenous freshwater fish, Acheilognathus koreensis.

Han JE, Kang W, Lee JY, Sung H, Hyun DW, Kim HS, Kim PS, Tak EJ, Jeong YS, Lee JY, Lee SY, Yun JH, Jung MJ, Shin NR, Whon TW, Kang MS, Lee KE, Lee BH, Bae JW.

Int J Syst Evol Microbiol. 2020 Feb 10. doi: 10.1099/ijsem.0.004034. [Epub ahead of print]

PMID:
32038006
3.

Flammeovirga pectinis sp. nov., isolated from the gut of the Korean scallop, Patinopecten yessoensis.

Jeong YS, Kang W, Sung H, Lee JY, Yun JH, Shin NR, Kim HS, Lee SY, Han JE, Lee JY, Tak EJ, Kim PS, Hyun DW, Jung MJ, Whon TW, Kang MS, Lee KE, Lee BH, Bae JW.

Int J Syst Evol Microbiol. 2020 Jan;70(1):499-504. doi: 10.1099/ijsem.0.003783.

PMID:
31613737
4.

Undibacterium piscinae sp. nov., isolated from Korean shiner intestine.

Lee SY, Kang W, Kim PS, Kim HS, Sung H, Shin NR, Whon TW, Yun JH, Lee JY, Lee JY, Jung MJ, Jeong YS, Tak EJ, Han JE, Hyun DW, Kang MS, Lee KE, Lee BH, Bae JW.

Int J Syst Evol Microbiol. 2019 Oct;69(10):3148-3154. doi: 10.1099/ijsem.0.003604.

PMID:
31385778
5.

Complete Genome Sequence of Humibacter aquilariae BT305, Isolated from the Small Intestine of Castrated Beef Cattle.

Whon TW, Bae JW.

Microbiol Resour Announc. 2019 Jan 24;8(4). pii: e01511-18. doi: 10.1128/MRA.01511-18. eCollection 2019 Jan.

6.

Complete genome sequence of Kocuria rhizophila BT304, isolated from the small intestine of castrated beef cattle.

Whon TW, Kim HS, Bae JW.

Gut Pathog. 2018 Sep 27;10:42. doi: 10.1186/s13099-018-0270-9. eCollection 2018.

7.

Phenotypic and Genomic Properties of Brachybacterium vulturis sp. nov. and Brachybacterium avium sp. nov.

Tak EJ, Kim PS, Hyun DW, Kim HS, Lee JY, Kang W, Sung H, Shin NR, Kim MS, Whon TW, Bae JW.

Front Microbiol. 2018 Aug 7;9:1809. doi: 10.3389/fmicb.2018.01809. eCollection 2018.

8.

Oceanisphaera avium sp. nov., isolated from the gut of the cinereous vulture, Aegypius monachus.

Sung H, Kim HS, Lee JY, Kang W, Kim PS, Hyun DW, Tak EJ, Jung MJ, Yun JH, Kim MS, Shin NR, Whon TW, Rho JR, Park SD, Shim HE, Bae JW.

Int J Syst Evol Microbiol. 2018 Jun;68(6):2068-2073. doi: 10.1099/ijsem.0.002797. Epub 2018 May 3.

PMID:
29722644
9.

The effects of sequencing platforms on phylogenetic resolution in 16 S rRNA gene profiling of human feces.

Whon TW, Chung WH, Lim MY, Song EJ, Kim PS, Hyun DW, Shin NR, Bae JW, Nam YD.

Sci Data. 2018 Apr 24;5:180068. doi: 10.1038/sdata.2018.68.

10.

Tumebacillus avium sp. nov., isolated from the gut of a cinereous vulture, Aegypius monachus.

Sung H, Kim HS, Lee JY, Kang W, Kim PS, Hyun DW, Tak EJ, Jung MJ, Yun JH, Kim MS, Shin NR, Whon TW, Rho JR, Park SD, Shim HE, Bae JW.

Int J Syst Evol Microbiol. 2018 May;68(5):1659-1664. doi: 10.1099/ijsem.0.002725. Epub 2018 Mar 21.

PMID:
29561257
11.

Blautia hominis sp. nov., isolated from human faeces.

Shin NR, Kang W, Tak EJ, Hyun DW, Kim PS, Kim HS, Lee JY, Sung H, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2018 Apr;68(4):1059-1064. doi: 10.1099/ijsem.0.002623. Epub 2018 Feb 9.

PMID:
29458493
12.

Dysbiosis of Inferior Turbinate Microbiota Is Associated with High Total IgE Levels in Patients with Allergic Rhinitis.

Hyun DW, Min HJ, Kim MS, Whon TW, Shin NR, Kim PS, Kim HS, Lee JY, Kang W, Choi AMK, Yoon JH, Bae JW.

Infect Immun. 2018 Mar 22;86(4). pii: e00934-17. doi: 10.1128/IAI.00934-17. Print 2018 Apr.

13.

The green tea modulates large intestinal microbiome and exo/endogenous metabolome altered through chronic UVB-exposure.

Jung ES, Park HM, Hyun SM, Shon JC, Singh D, Liu KH, Whon TW, Bae JW, Hwang JS, Lee CH.

PLoS One. 2017 Nov 8;12(11):e0187154. doi: 10.1371/journal.pone.0187154. eCollection 2017.

14.

Conditionally Pathogenic Gut Microbes Promote Larval Growth by Increasing Redox-Dependent Fat Storage in High-Sugar Diet-Fed Drosophila.

Whon TW, Shin NR, Jung MJ, Hyun DW, Kim HS, Kim PS, Bae JW.

Antioxid Redox Signal. 2017 Dec 1;27(16):1361-1380. doi: 10.1089/ars.2016.6790. Epub 2017 May 24.

PMID:
28462587
15.

Complete Genome Sequence of Lactobacillus casei LC5, a Potential Probiotics for Atopic Dermatitis.

Kang J, Chung WH, Lim TJ, Whon TW, Lim S, Nam YD.

Front Immunol. 2017 Apr 7;8:413. doi: 10.3389/fimmu.2017.00413. eCollection 2017. No abstract available.

16.

Microbulbifer echini sp. nov., isolated from the gastrointestinal tract of a purple sea urchin, Heliocidaris crassispina.

Lee JY, Kim PS, Hyun DW, Kim HS, Shin NR, Jung MJ, Yun JH, Kim MS, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2017 Apr;67(4):998-1004. doi: 10.1099/ijsem.0.001731. Epub 2017 May 5.

PMID:
27959777
17.

Chronic Repression of mTOR Complex 2 Induces Changes in the Gut Microbiota of Diet-induced Obese Mice.

Jung MJ, Lee J, Shin NR, Kim MS, Hyun DW, Yun JH, Kim PS, Whon TW, Bae JW.

Sci Rep. 2016 Jul 29;6:30887. doi: 10.1038/srep30887.

18.

Sedimentitalea todarodis sp. nov., isolated from the intestinal tract of a Japanese flying squid.

Kim HS, Hyun DW, Lee JY, Kim PS, Whon TW, Kang W, Bae JW.

Int J Syst Evol Microbiol. 2016 Sep;66(9):3293-3298. doi: 10.1099/ijsem.0.001188. Epub 2016 May 25.

PMID:
27226032
19.

Proteus cibarius sp. nov., a swarming bacterium from Jeotgal, a traditional Korean fermented seafood, and emended description of the genus Proteus.

Hyun DW, Jung MJ, Kim MS, Shin NR, Kim PS, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2016 Jun;66(6):2158-2164. doi: 10.1099/ijsem.0.001002. Epub 2016 Mar 4.

PMID:
26944634
20.

Pseudahrensia todarodis sp. nov., isolated from the gut of a Japanese flying squid, Todarodes pacificus.

Kim HS, Kim PS, Hyun DW, Lee JY, Kang W, Shin NR, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2016 Mar;66(3):1389-1393. doi: 10.1099/ijsem.0.000888. Epub 2016 Jan 12.

PMID:
26763785
21.

Simplicispira piscis sp. nov., isolated from the gut of a Korean rockfish, Sebastes schlegelii.

Hyun DW, Oh SJ, Kim MS, Whon TW, Jung MJ, Shin NR, Kim PS, Kim HS, Lee JY, Kang W, Bae JW.

Int J Syst Evol Microbiol. 2015 Dec;65(12):4689-94. doi: 10.1099/ijsem.0.000635. Epub 2015 Sep 23.

PMID:
26400548
22.

Genomic Analysis of the Moderately Haloalkaliphilic Bacterium Oceanobacillus kimchii Strain X50T with Improved High-Quality Draft Genome Sequences.

Hyun DW, Whon TW, Kim JY, Kim PS, Shin NR, Kim MS, Bae JW.

J Microbiol Biotechnol. 2015 Dec 28;25(12):1971-6. doi: 10.4014/jmb.1507.07077.

23.

Bizionia fulviae sp. nov., isolated from the gut of an egg cockle, Fulvia mutica.

Kim HS, Hyun DW, Kim PS, Lee JY, Shin NR, Yun JH, Whon TW, Kim MS, Jung MJ, Bae JW.

Int J Syst Evol Microbiol. 2015 Sep;65(9):3066-72. doi: 10.1099/ijs.0.000380. Epub 2015 Jun 25.

PMID:
26297143
24.

Proteobacteria: microbial signature of dysbiosis in gut microbiota.

Shin NR, Whon TW, Bae JW.

Trends Biotechnol. 2015 Sep;33(9):496-503. doi: 10.1016/j.tibtech.2015.06.011. Epub 2015 Jul 22. Review.

PMID:
26210164
25.

Genomic and phenotypic analyses of Carnobacterium jeotgali strain MS3(T), a lactate-producing candidate biopreservative bacterium isolated from salt-fermented shrimp.

Whon TW, Hyun DW, Nam YD, Kim MS, Song EJ, Jang YK, Jung ES, Shin NR, Oh SJ, Kim PS, Kim HS, Lee CH, Bae JW.

FEMS Microbiol Lett. 2015 May;362(10). pii: fnv058. doi: 10.1093/femsle/fnv058. Epub 2015 Apr 13.

PMID:
25868912
26.

Corynebacterium atrinae sp. nov., isolated from the gastrointestinal tract of a pen shell, Atrina pectinata.

Kim PS, Shin NR, Hyun DW, Kim JY, Whon TW, Oh SJ, Bae JW.

Int J Syst Evol Microbiol. 2015 Feb;65(Pt 2):531-6. doi: 10.1099/ijs.0.067587-0. Epub 2014 Nov 17.

PMID:
25404484
27.

Insect gut bacterial diversity determined by environmental habitat, diet, developmental stage, and phylogeny of host.

Yun JH, Roh SW, Whon TW, Jung MJ, Kim MS, Park DS, Yoon C, Nam YD, Kim YJ, Choi JH, Kim JY, Shin NR, Kim SH, Lee WJ, Bae JW.

Appl Environ Microbiol. 2014 Sep;80(17):5254-64. doi: 10.1128/AEM.01226-14. Epub 2014 Jun 13.

28.

Endozoicomonas atrinae sp. nov., isolated from the intestine of a comb pen shell Atrina pectinata.

Hyun DW, Shin NR, Kim MS, Oh SJ, Kim PS, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2014 Jul;64(Pt 7):2312-8. doi: 10.1099/ijs.0.060780-0. Epub 2014 Apr 14.

PMID:
24733175
29.

Polaribacter atrinae sp. nov., isolated from the intestine of a comb pen shell, Atrina pectinata.

Hyun DW, Shin NR, Kim MS, Kim PS, Jung MJ, Kim JY, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2014 May;64(Pt 5):1654-61. doi: 10.1099/ijs.0.060889-0. Epub 2014 Feb 7.

PMID:
24510977
30.

Halococcus sediminicola sp. nov., an extremely halophilic archaeon isolated from a marine sediment.

Yim KJ, Cha IT, Whon TW, Lee HW, Song HS, Kim KN, Nam YD, Lee SJ, Bae JW, Rhee SK, Choi JS, Seo MJ, Roh SW, Kim D.

Antonie Van Leeuwenhoek. 2014 Jan;105(1):73-9. doi: 10.1007/s10482-013-0054-7. Epub 2013 Oct 17.

PMID:
24132728
31.

Comparative viral metagenomics of environmental samples from Korea.

Kim MS, Whon TW, Bae JW.

Genomics Inform. 2013 Sep;11(3):121-8. doi: 10.5808/GI.2013.11.3.121. Epub 2013 Sep 30. Review.

32.

Actinomyces haliotis sp. nov., a bacterium isolated from the gut of an abalone, Haliotis discus hannai.

Hyun DW, Shin NR, Kim MS, Kim PS, Kim JY, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):456-61. doi: 10.1099/ijs.0.055350-0. Epub 2013 Oct 4.

PMID:
24096355
33.

Cloacibacterium haliotis sp. nov., isolated from the gut of an abalone, Haliotis discus hannai.

Hyun DW, Shin NR, Kim MS, Kim JY, Kim PS, Oh SJ, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2014 Jan;64(Pt 1):72-7. doi: 10.1099/ijs.0.054585-0. Epub 2013 Sep 6.

PMID:
24014625
34.

Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain Crm(T) (= DSM 23852(T)).

Hyun DW, Whon TW, Cho YJ, Chun J, Kim MS, Jung MJ, Shin NR, Kim JY, Kim PS, Yun JH, Lee J, Oh SJ, Bae JW.

Stand Genomic Sci. 2013 Jun 3;8(2):255-63. doi: 10.4056/sigs.3967649. eCollection 2013.

35.

Pseudoruegeria haliotis sp. nov., isolated from the gut of the abalone Haliotis discus hannai.

Hyun DW, Shin NR, Kim MS, Kim PS, Kim JY, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2013 Dec;63(Pt 12):4626-32. doi: 10.1099/ijs.0.053892-0. Epub 2013 Aug 9.

PMID:
23934248
36.

Enterococcus diestrammenae sp. nov., isolated from the gut of Diestrammena coreana.

Kim JY, Shin NR, Na HK, Hyun DW, Whon TW, Kim PS, Yun JH, Bae JW.

Int J Syst Evol Microbiol. 2013 Dec;63(Pt 12):4540-5. doi: 10.1099/ijs.0.050062-0. Epub 2013 Aug 1.

37.

Paenibacillus marinisediminis sp. nov., a bacterium isolated from marine sediment.

Lee HW, Roh SW, Yim KJ, Shin NR, Lee J, Whon TW, Kim JY, Hyun DW, Kim D, Bae JW.

J Microbiol. 2013 Jun;51(3):312-7. doi: 10.1007/s12275-013-3198-2. Epub 2013 Jun 28.

PMID:
23812811
38.

Rhodopirellula rosea sp. nov., a novel bacterium isolated from an ark clam Scapharca broughtonii.

Roh SW, Lee HW, Yim KJ, Shin NR, Lee J, Whon TW, Lim NL, Kim D, Bae JW.

J Microbiol. 2013 Jun;51(3):301-4. doi: 10.1007/s12275-013-3210-x. Epub 2013 Jun 28.

PMID:
23812809
39.

Shimia haliotis sp. nov., a bacterium isolated from the gut of an abalone, Haliotis discus hannai.

Hyun DW, Kim MS, Shin NR, Kim JY, Kim PS, Whon TW, Yun JH, Bae JW.

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4248-53. doi: 10.1099/ijs.0.053140-0. Epub 2013 Jun 28.

PMID:
23811138
40.

An increase in the Akkermansia spp. population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice.

Shin NR, Lee JC, Lee HY, Kim MS, Whon TW, Lee MS, Bae JW.

Gut. 2014 May;63(5):727-35. doi: 10.1136/gutjnl-2012-303839. Epub 2013 Jun 26.

PMID:
23804561
41.

Blastopirellula cremea sp. nov., isolated from a dead ark clam.

Lee HW, Roh SW, Shin NR, Lee J, Whon TW, Jung MJ, Yun JH, Kim MS, Hyun DW, Kim D, Bae JW.

Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):2314-9. doi: 10.1099/ijs.0.044099-0. Epub 2012 Nov 16.

PMID:
23159757
42.

Orbus sasakiae sp. nov., a bacterium isolated from the gut of the butterfly Sasakia charonda, and emended description of the genus Orbus.

Kim JY, Lee J, Shin NR, Yun JH, Whon TW, Kim MS, Jung MJ, Roh SW, Hyun DW, Bae JW.

Int J Syst Evol Microbiol. 2013 May;63(Pt 5):1766-70. doi: 10.1099/ijs.0.041871-0. Epub 2012 Aug 31.

PMID:
22941300
43.

Metagenomic characterization of airborne viral DNA diversity in the near-surface atmosphere.

Whon TW, Kim MS, Roh SW, Shin NR, Lee HW, Bae JW.

J Virol. 2012 Aug;86(15):8221-31. doi: 10.1128/JVI.00293-12. Epub 2012 May 23.

44.

Ruegeria conchae sp. nov., isolated from the ark clam Scapharca broughtonii.

Lee J, Whon TW, Shin NR, Roh SW, Kim J, Park SK, Kim MS, Shin KS, Lee JS, Lee KC, Kim YO, Bae JW.

Int J Syst Evol Microbiol. 2012 Dec;62(Pt 12):2851-7. doi: 10.1099/ijs.0.037283-0. Epub 2012 Jan 6.

PMID:
22228657
45.

Neptunomonas concharum sp. nov., isolated from a dead ark clam, and emended description of the genus Neptunomonas.

Lee HW, Shin NR, Lee J, Roh SW, Whon TW, Bae JW.

Int J Syst Evol Microbiol. 2012 Nov;62(Pt 11):2657-61. doi: 10.1099/ijs.0.037473-0. Epub 2011 Dec 23.

PMID:
22199221
46.

Tropicimonas sediminicola sp. nov., isolated from marine sediment.

Shin NR, Roh SW, Kim MS, Yun B, Whon TW, Kim YO, Bae JW.

Int J Syst Evol Microbiol. 2012 Oct;62(Pt 10):2424-9. doi: 10.1099/ijs.0.037929-0. Epub 2011 Nov 25.

PMID:
22140172
47.

Draft genome sequence of Bacteroides faecis MAJ27T, a strain isolated from human feces.

Kim MS, Whon TW, Roh SW, Shin NR, Bae JW.

J Bacteriol. 2011 Dec;193(23):6801-2. doi: 10.1128/JB.06210-11.

48.

Genome sequence of Brachybacterium squillarum M-6-3(T), isolated from salt-fermented seafood.

Park SK, Roh SW, Whon TW, Bae JW.

J Bacteriol. 2011 Nov;193(22):6416-7. doi: 10.1128/JB.06183-11.

49.

Genome sequence of Lentibacillus jeotgali Grbi(T), isolated from traditional Korean salt-fermented seafood.

Jung MJ, Roh SW, Kim MS, Whon TW, Bae JW.

J Bacteriol. 2011 Nov;193(22):6414-5. doi: 10.1128/JB.06139-11.

50.

Ornithinibacillus scapharcae sp. nov., isolated from a dead ark clam.

Shin NR, Whon TW, Kim MS, Roh SW, Jung MJ, Kim YO, Bae JW.

Antonie Van Leeuwenhoek. 2012 Jan;101(1):147-54. doi: 10.1007/s10482-011-9645-3. Epub 2011 Sep 28.

PMID:
21952732

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