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Vagococcus bubulae sp. nov., isolated from ground beef, and Vagococcus vulneris sp. nov., isolated from a human foot wound.

Shewmaker PL, Whitney AM, Gulvik CA, Humrighouse BW, Gartin J, Moura H, Barr JR, Moore ERB, Karlsson R, Pinto TCA, Teixeira LM.

Int J Syst Evol Microbiol. 2019 May 24. doi: 10.1099/ijsem.0.003459. [Epub ahead of print]


A Real-Time Multiplex PCR Assay for Detection of Elizabethkingia Species and Differentiation between Elizabethkingia anophelis and E. meningoseptica.

Kelly AJ, Karpathy SE, Gulvik CA, Ivey ML, Whitney AM, Bell ME, Nicholson AC, Humrighouse BW, McQuiston JR.

J Clin Microbiol. 2019 Mar 28;57(4). pii: e01619-18. doi: 10.1128/JCM.01619-18. Print 2019 Apr.


The draft genomes of Elizabethkingia anophelis of equine origin are genetically similar to three isolates from human clinical specimens.

Johnson WL, Ramachandran A, Torres NJ, Nicholson AC, Whitney AM, Bell M, Villarma A, Humrighouse BW, Sheth M, Dowd SE, McQuiston JR, Gustafson JE.

PLoS One. 2018 Jul 19;13(7):e0200731. doi: 10.1371/journal.pone.0200731. eCollection 2018.


Complete Circularized Genome Sequences of Four Strains of Elizabethkingia anophelis, Including Two Novel Strains Isolated from Wild-Caught Anopheles sinensis.

Pei D, Nicholson AC, Jiang J, Chen H, Whitney AM, Villarma A, Bell M, Humrighouse B, Rowe LA, Sheth M, Batra D, Juieng P, Loparev VN, McQuiston JR, Lan Y, Ma Y, Xu J.

Genome Announc. 2017 Nov 22;5(47). pii: e01359-17. doi: 10.1128/genomeA.01359-17.


Streptococcus azizii sp. nov., isolated from naïve weanling mice.

Shewmaker PL, Whitney AM, Gulvik CA, Lipman NS.

Int J Syst Evol Microbiol. 2017 Dec;67(12):5032-5037. doi: 10.1099/ijsem.0.002407. Epub 2017 Oct 12.


Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov.

Nicholson AC, Gulvik CA, Whitney AM, Humrighouse BW, Graziano J, Emery B, Bell M, Loparev V, Juieng P, Gartin J, Bizet C, Clermont D, Criscuolo A, Brisse S, McQuiston JR.

Antonie Van Leeuwenhoek. 2018 Jan;111(1):55-72. doi: 10.1007/s10482-017-0926-3. Epub 2017 Aug 30.


Enterococcus crotali sp. nov., isolated from faecal material of a timber rattlesnake.

McLaughlin RW, Shewmaker PL, Whitney AM, Humrighouse BW, Lauer AC, Loparev VN, Gulvik CA, Cochran PA, Dowd SE.

Int J Syst Evol Microbiol. 2017 Jun;67(6):1984-1989. doi: 10.1099/ijsem.0.001900. Epub 2017 Jun 20.


Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain.

Perrin A, Larsonneur E, Nicholson AC, Edwards DJ, Gundlach KM, Whitney AM, Gulvik CA, Bell ME, Rendueles O, Cury J, Hugon P, Clermont D, Enouf V, Loparev V, Juieng P, Monson T, Warshauer D, Elbadawi LI, Walters MS, Crist MB, Noble-Wang J, Borlaug G, Rocha EPC, Criscuolo A, Touchon M, Davis JP, Holt KE, McQuiston JR, Brisse S.

Nat Commun. 2017 May 24;8:15483. doi: 10.1038/ncomms15483.


Correction for Shewmaker et al., Evaluation of Methods for Identification and Determination of the Taxonomic Status of Strains Belonging to the Streptococcus porcinus-Streptococcus pseudoporcinus Complex Isolated from Animal, Human, and Dairy Sources.

Shewmaker PL, Steigerwalt AG, Whitney AM, Morey RE, Graziano JC, Facklam RR, Musser KA, Merquior VL, Teixeira LM.

J Clin Microbiol. 2016 Dec 28;55(1):345. doi: 10.1128/JCM.02149-16. Print 2017 Jan. No abstract available.


Correction for Shewmaker et al., Reevaluation of the Taxonomic Status of Recently Described Species of Enterococcus: Evidence that E. thailandicus Is a Senior Subjective Synonym of "E. sanguinicola" and Confirmation of E. caccae as a Species Distinct from E. silesiacus.

Shewmaker PL, Steigerwalt AG, Nicholson AC, Carvalho MD, Facklam RR, Whitney AM, Teixeira LM.

J Clin Microbiol. 2016 Dec 28;55(1):344. doi: 10.1128/JCM.01953-16. Print 2017 Jan. No abstract available.


Complete Genome Sequences of Enterococcus rotai LMG 26678T and Enterococcus silesiacus LMG 23085T.

Lauer AC, Humrighouse BW, Loparev V, Shewmaker PL, Whitney AM, McQuiston JR, McLaughlin RW.

Genome Announc. 2016 Dec 15;4(6). pii: e01387-16. doi: 10.1128/genomeA.01387-16.


Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak.

Nicholson AC, Whitney AM, Emery BD, Bell ME, Gartin JT, Humrighouse BW, Loparev VN, Batra D, Sheth M, Rowe LA, Juieng P, Knipe K, Gulvik C, McQuiston JR.

Genome Announc. 2016 Jun 16;4(3). pii: e00563-16. doi: 10.1128/genomeA.00563-16.


Oblitimonas alkaliphila gen. nov., sp. nov., in the family Pseudomonadaceae, recovered from a historical collection of previously unidentified clinical strains.

Drobish AM, Emery BD, Whitney AM, Lauer AC, Metcalfe MG, McQuiston JR.

Int J Syst Evol Microbiol. 2016 Aug;66(8):3063-70. doi: 10.1099/ijsem.0.001147. Epub 2016 May 11.


Complete Genome Sequence of Strain H5989 of a Novel Devosia Species.

Nicholson AC, Whitney AM, Humrighouse B, Emery B, Loparev V, McQuiston JR.

Genome Announc. 2015 Sep 3;3(5). pii: e00934-15. doi: 10.1128/genomeA.00934-15.


Preliminary laboratory report of fungal infections associated with contaminated methylprednisolone injections.

Lockhart SR, Pham CD, Gade L, Iqbal N, Scheel CM, Cleveland AA, Whitney AM, Noble-Wang J, Chiller TM, Park BJ, Litvintseva AP, Brandt ME.

J Clin Microbiol. 2013 Aug;51(8):2654-61. doi: 10.1128/JCM.01000-13. Epub 2013 Jun 12.


Detection of fungal DNA in human body fluids and tissues during a multistate outbreak of fungal meningitis and other infections.

Gade L, Scheel CM, Pham CD, Lindsley MD, Iqbal N, Cleveland AA, Whitney AM, Lockhart SR, Brandt ME, Litvintseva AP.

Eukaryot Cell. 2013 May;12(5):677-83. doi: 10.1128/EC.00046-13. Epub 2013 Mar 1.


Evaluation of methods for identification and determination of the taxonomic status of strains belonging to the Streptococcus porcinus-Streptococcus pseudoporcinus complex isolated from animal, human, and dairy sources.

Shewmaker PL, Steigerwalt AG, Whitney AM, Morey RE, Graziano JC, Facklam RR, Musser KA, Merquior VL, Teixeira LM.

J Clin Microbiol. 2012 Nov;50(11):3591-7. doi: 10.1128/JCM.01481-12. Epub 2012 Aug 29. Erratum in: J Clin Microbiol. 2016 Dec 28;55(1):345.


Characterization of human clinical isolates of Dietzia species previously misidentified as Rhodococcus equi.

Niwa H, Lasker BA, Hinrikson HP, Franzen CG, Steigerwalt AG, Whitney AM, Brown JM.

Eur J Clin Microbiol Infect Dis. 2012 May;31(5):811-20. doi: 10.1007/s10096-011-1379-7. Epub 2011 Sep 3.


Mycobacterium chelonae-abscessus complex associated with sinopulmonary disease, Northeastern USA.

Simmon KE, Brown-Elliott BA, Ridge PG, Durtschi JD, Mann LB, Slechta ES, Steigerwalt AG, Moser BD, Whitney AM, Brown JM, Voelkerding KV, McGowan KL, Reilly AF, Kirn TJ, Butler WR, Edelstein PH, Wallace RJ Jr, Petti CA.

Emerg Infect Dis. 2011 Sep;17(9):1692-700. doi: 10.3201/eid1709.101667.


Reevaluation of the taxonomic status of recently described species of Enterococcus: evidence that E. thailandicus is a senior subjective synonym of "E. sanguinicola" and confirmation of E. caccae as a species distinct from E. silesiacus.

Shewmaker PL, Steigerwalt AG, Nicholson AC, Carvalho Mda G, Facklam RR, Whitney AM, Teixeira LM.

J Clin Microbiol. 2011 Jul;49(7):2676-9. doi: 10.1128/JCM.00399-11. Epub 2011 May 4. Erratum in: J Clin Microbiol. 2016 Dec 28;55(1):344.


Novel Corynebacterium diphtheriae in domestic cats.

Hall AJ, Cassiday PK, Bernard KA, Bolt F, Steigerwalt AG, Bixler D, Pawloski LC, Whitney AM, Iwaki M, Baldwin A, Dowson CG, Komiya T, Takahashi M, Hinrikson HP, Tondella ML.

Emerg Infect Dis. 2010 Apr;16(4):688-91. doi: 10.3201/eid1604.091107.


Population structure and capsular switching of invasive Neisseria meningitidis isolates in the pre-meningococcal conjugate vaccine era--United States, 2000-2005.

Harrison LH, Shutt KA, Schmink SE, Marsh JW, Harcourt BH, Wang X, Whitney AM, Stephens DS, Cohn AA, Messonnier NE, Mayer LW.

J Infect Dis. 2010 Apr 15;201(8):1208-24. doi: 10.1086/651505.


Genotypic comparison of invasive Neisseria meningitidis serogroup Y isolates from the United States, South Africa, and Israel, isolated from 1999 through 2002.

Whitney AM, Coulson GB, von Gottberg A, Block C, Keller N, Mayer LW, Messonnier NE, Klugman KP.

J Clin Microbiol. 2009 Sep;47(9):2787-93. doi: 10.1128/JCM.00091-09. Epub 2009 Jul 1.


Development and evaluation of a novel multiplex PCR technology for molecular differential detection of bacterial respiratory disease pathogens.

Benson R, Tondella ML, Bhatnagar J, Carvalho Mda G, Sampson JS, Talkington DF, Whitney AM, Mothershed E, McGee L, Carlone G, McClee V, Guarner J, Zaki S, Dejsiri S, Cronin K, Han J, Fields BS.

J Clin Microbiol. 2008 Jun;46(6):2074-7. doi: 10.1128/JCM.01858-07. Epub 2008 Apr 9.


Nucleic acid-based methods for the detection of bacterial pathogens: present and future considerations for the clinical laboratory.

Mothershed EA, Whitney AM.

Clin Chim Acta. 2006 Jan;363(1-2):206-20. Epub 2005 Sep 1. Review.


High level of sequence diversity in the 16S rRNA genes of Haemophilus influenzae isolates is useful for molecular subtyping.

Sacchi CT, Alber D, Dull P, Mothershed EA, Whitney AM, Barnett GA, Popovic T, Mayer LW.

J Clin Microbiol. 2005 Aug;43(8):3734-42.


Targeting nucleic acid secondary structures with polyamides using an optimized dynamic combinatorial approach.

Ladame S, Whitney AM, Balasubramanian S.

Angew Chem Int Ed Engl. 2005 Sep 5;44(35):5736-9. No abstract available.


Dynamic covalent chemistry on self-templating PNA oligomers: formation of a bimolecular PNA quadruplex.

Krishnan-Ghosh Y, Whitney AM, Balasubramanian S.

Chem Commun (Camb). 2005 Jun 28;(24):3068-70. Epub 2005 May 11.


Neisseria meningitidis serogroup W-135 carriage among US travelers to the 2001 Hajj.

Dull PM, Abdelwahab J, Sacchi CT, Becker M, Noble CA, Barnett GA, Kaiser RM, Mayer LW, Whitney AM, Schmink S, Ajello GW, Dolan-Livengood J, Stephens DS, Cetron MS, Popovic T, Rosenstein NE.

J Infect Dis. 2005 Jan 1;191(1):33-9. Epub 2004 Nov 29.


Use of 16S rRNA gene sequencing for rapid confirmatory identification of Brucella isolates.

Gee JE, De BK, Levett PN, Whitney AM, Novak RT, Popovic T.

J Clin Microbiol. 2004 Aug;42(8):3649-54.


Templated ligand assembly by using G-quadruplex DNA and dynamic covalent chemistry.

Whitney AM, Ladame S, Balasubramanian S.

Angew Chem Int Ed Engl. 2004 Feb 20;43(9):1143-6. No abstract available.


Use of real-time PCR to resolve slide agglutination discrepancies in serogroup identification of Neisseria meningitidis.

Mothershed EA, Sacchi CT, Whitney AM, Barnett GA, Ajello GW, Schmink S, Mayer LW, Phelan M, Taylor TH Jr, Bernhardt SA, Rosenstein NE, Popovic T.

J Clin Microbiol. 2004 Jan;42(1):320-8.


Use of 16S rRNA gene sequencing for rapid identification and differentiation of Burkholderia pseudomallei and B. mallei.

Gee JE, Sacchi CT, Glass MB, De BK, Weyant RS, Levett PN, Whitney AM, Hoffmaster AR, Popovic T.

J Clin Microbiol. 2003 Oct;41(10):4647-54.


Paracoccus yeeii sp. nov. (formerly CDC group EO-2), a novel bacterial species associated with human infection.

Daneshvar MI, Hollis DG, Weyant RS, Steigerwalt AG, Whitney AM, Douglas MP, Macgregor JP, Jordan JG, Mayer LW, Rassouli SM, Barchet W, Munro C, Shuttleworth L, Bernard K.

J Clin Microbiol. 2003 Mar;41(3):1289-94.


Sequence diversity of Neisseria meningitidis 16S rRNA genes and use of 16S rRNA gene sequencing as a molecular subtyping tool.

Sacchi CT, Whitney AM, Reeves MW, Mayer LW, Popovic T.

J Clin Microbiol. 2002 Dec;40(12):4520-7.


Sequencing of 16S rRNA gene: a rapid tool for identification of Bacillus anthracis.

Sacchi CT, Whitney AM, Mayer LW, Morey R, Steigerwalt A, Boras A, Weyant RS, Popovic T.

Emerg Infect Dis. 2002 Oct;8(10):1117-23.


Outbreak of W135 meningococcal disease in 2000: not emergence of a new W135 strain but clonal expansion within the electophoretic type-37 complex.

Mayer LW, Reeves MW, Al-Hamdan N, Sacchi CT, Taha MK, Ajello GW, Schmink SE, Noble CA, Tondella ML, Whitney AM, Al-Mazrou Y, Al-Jefri M, Mishkhis A, Sabban S, Caugant DA, Lingappa J, Rosenstein NE, Popovic T.

J Infect Dis. 2002 Jun 1;185(11):1596-605. Epub 2002 May 17.


Serosubtypes and PorA types of Neisseria meningitidis serogroup B isolated in Brazil during 1997--1998: overview and implications for vaccine development.

Sacchi CT, Lemos AP, Popovic T, De Morais JC, Whitney AM, Melles CE, Brondi LM, Monteiro LM, Paiva MV, Solari CA, Mayer LW.

J Clin Microbiol. 2001 Aug;39(8):2897-903.


Assignment of CDC weak oxidizer group 2 (WO-2) to the genus Pandoraea and characterization of three new Pandoraea genomospecies.

Daneshvar MI, Hollis DG, Steigerwalt AG, Whitney AM, Spangler L, Douglas MP, Jordan JG, MacGregor JP, Hill BC, Tenover FC, Brenner DJ, Weyant RS.

J Clin Microbiol. 2001 May;39(5):1819-26.


Diversity and prevalence of PorA types in Neisseria meningitidis serogroup B in the United States, 1992-1998.

Sacchi CT, Whitney AM, Popovic T, Beall DS, Reeves MW, Plikaytis BD, Rosenstein NE, Perkins BA, Tondella ML, Mayer LW.

J Infect Dis. 2000 Oct;182(4):1169-76. Epub 2000 Sep 8.


Neisseria meningitidis serogroup W135 isolates associated with the ET-37 complex.

Popovic T, Sacchi CT, Reeves MW, Whitney AM, Mayer LW, Noble CA, Ajello GW, Mostashari F, Bendana N, Lingappa J, Hajjeh R, Rosenstein NE.

Emerg Infect Dis. 2000 Jul-Aug;6(4):428-9. No abstract available.


Mycobacterium septicum sp. nov., a new rapidly growing species associated with catheter-related bacteraemia.

Schinsky MF, McNeil MM, Whitney AM, Steigerwalt AG, Lasker BA, Floyd MM, Hogg GG, Brenner DJ, Brown JM.

Int J Syst Evol Microbiol. 2000 Mar;50 Pt 2:575-81.


Specific primer for AP-PCR identification of Actinobacillus actinomycetemcomitans.

Avila-Campos MJ, Sacchi CT, Whitney AM, Steigerwalt AG, Mayer LW.

J Clin Periodontol. 1999 Nov;26(11):699-704.


Arbitrarily primed-polymerase chain reaction for identification and epidemiologic subtyping of oral isolates of Fusobacterium nucleatum.

Avila-Campos MJ, Sacchi CT, Whitney AM, Steigerwalt AG, Mayer LW.

J Periodontol. 1999 Oct;70(10):1202-8.


Recurrent bacteremia caused by a "Flexispira"-like organism in a patient with X-linked (Bruton's) agammaglobulinemia.

Weir S, Cuccherini B, Whitney AM, Ray ML, MacGregor JP, Steigerwalt A, Daneshvar MI, Weyant R, Wray B, Steele J, Strober W, Gill VJ.

J Clin Microbiol. 1999 Aug;37(8):2439-45.


Bartonella koehlerae sp. nov., isolated from cats.

Droz S, Chi B, Horn E, Steigerwalt AG, Whitney AM, Brenner DJ.

J Clin Microbiol. 1999 Apr;37(4):1117-22.


Proposed standardization of Neisseria meningitidis PorA variable-region typing nomenclature.

Sacchi CT, Lemos AP, Brandt ME, Whitney AM, Melles CE, Solari CA, Frasch CE, Mayer LW.

Clin Diagn Lab Immunol. 1998 Nov;5(6):845-55.

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