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Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma.

Kelley DZ, Flam EL, Guo T, Danilova LV, Zamuner F, Bohrson C, Considine M, Windsor EJ, Bishop JA, Zhang C, Koch WM, Sidransky D, Westra WH, Chung CH, Califano JA, Wheelan S, Favorov AV, Florea L, Fertig EJ, Gaykalova DA.

Transl Res. 2018 Jul 26. pii: S1931-5244(18)30108-7. doi: 10.1016/j.trsl.2018.07.007. [Epub ahead of print]


Increasing prevalence of human papillomavirus-positive oropharyngeal cancers among older adults.

Windon MJ, D'Souza G, Rettig EM, Westra WH, van Zante A, Wang SJ, Ryan WR, Mydlarz WK, Ha PK, Miles BA, Koch W, Gourin C, Eisele DW, Fakhry C.

Cancer. 2018 Jul 15;124(14):2993-2999. doi: 10.1002/cncr.31385. Epub 2018 Apr 30.


Age Profile of Patients With Oropharyngeal Squamous Cell Carcinoma.

Rettig EM, Fakhry C, Khararjian A, Westra WH.

JAMA Otolaryngol Head Neck Surg. 2018 Jun 1;144(6):538-539. doi: 10.1001/jamaoto.2018.0310. No abstract available.


Human Papillomavirus-Related Neuroendocrine Carcinomas of the Head and Neck.

Westra WH.

Head Neck Pathol. 2018 Mar;12(1):9-12. doi: 10.1007/s12105-018-0886-6. Epub 2018 Mar 20.


Prognostic factors for human papillomavirus-positive and negative oropharyngeal carcinomas.

Yin LX, D'Souza G, Westra WH, Wang SJ, van Zante A, Zhang Y, Rettig EM, Ryan WR, Ha PK, Wentz A, Koch W, Eisele DW, Fakhry C.

Laryngoscope. 2018 Mar 14. doi: 10.1002/lary.27130. [Epub ahead of print]


INSM1 is a Sensitive and Specific Marker of Neuroendocrine Differentiation in Head and Neck Tumors.

Rooper LM, Bishop JA, Westra WH.

Am J Surg Pathol. 2018 May;42(5):665-671. doi: 10.1097/PAS.0000000000001037.


The impact of noninvasive follicular thyroid neoplasm with papillary-like nuclear features on the rate of malignancy for atypia of undetermined significance subcategories.

Hang JF, Westra WH, Zhou AG, Cooper DS, Ali SZ.

Cancer Cytopathol. 2018 May;126(5):309-316. doi: 10.1002/cncy.21981. Epub 2018 Feb 9.


HLA class I antigen processing machinery (APM) component expression and PD-1:PD-L1 pathway activation in HIV-infected head and neck cancers.

Pai SI, Jack Lee J, Carey TE, Westra WH, Ferrone S, Moore C, Mosunjac MB, Shin DM, Ferris RL; HNC SPORE HIV supplement consortium.

Oral Oncol. 2018 Feb;77:92-97. doi: 10.1016/j.oraloncology.2017.12.014. Epub 2017 Dec 28.


Human Papillomavirus Testing in Head and Neck Carcinomas: Guideline From the College of American Pathologists.

Lewis JS Jr, Beadle B, Bishop JA, Chernock RD, Colasacco C, Lacchetti C, Moncur JT, Rocco JW, Schwartz MR, Seethala RR, Thomas NE, Westra WH, Faquin WC.

Arch Pathol Lab Med. 2018 May;142(5):559-597. doi: 10.5858/arpa.2017-0286-CP. Epub 2017 Dec 18.


MYB Translocation Status in Salivary Gland Epithelial-Myoepithelial Carcinoma: Evaluation of Classic, Variant, and Hybrid Forms.

Bishop JA, Westra WH.

Am J Surg Pathol. 2018 Mar;42(3):319-325. doi: 10.1097/PAS.0000000000000990.


Clear Cell Carcinoma of Salivary Glands Is Frequently p16 Positive: A Pitfall in the Interpretation of Oropharyngeal Biopsies.

Bishop JA, Rooper LM, Chiosea SI, Westra WH.

Am J Surg Pathol. 2018 Mar;42(3):367-371. doi: 10.1097/PAS.0000000000000977.


PD-1 Expression in Head and Neck Squamous Cell Carcinomas Derives Primarily from Functionally Anergic CD4+ TILs in the Presence of PD-L1+ TAMs.

Mattox AK, Lee J, Westra WH, Pierce RH, Ghossein R, Faquin WC, Diefenbach TJ, Morris LG, Lin DT, Wirth LJ, Lefranc-Torres A, Ishida E, Chakravarty PD, Johnson L, Zeng YC, Chen H, Poznansky MC, Iyengar NM, Pai SI.

Cancer Res. 2017 Nov 15;77(22):6365-6374. doi: 10.1158/0008-5472.CAN-16-3453. Epub 2017 Sep 25.


Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks.

Kelley DZ, Flam EL, Izumchenko E, Danilova LV, Wulf HA, Guo T, Singman DA, Afsari B, Skaist AM, Considine M, Welch JA, Stavrovskaya E, Bishop JA, Westra WH, Khan Z, Koch WM, Sidransky D, Wheelan SJ, Califano JA, Favorov AV, Fertig EJ, Gaykalova DA.

Cancer Res. 2017 Dec 1;77(23):6538-6550. doi: 10.1158/0008-5472.CAN-17-0833. Epub 2017 Sep 25.


Prognostic biomarkers in patients with human immunodeficiency virus-positive disease with head and neck squamous cell carcinoma.

Zhang H, Kim S, Chen Z, Nannapaneni S, Chen AY, Moore CE, Sica G, Mosunjac M, Nguyen MLT, D'Souza G, Carey TE, Peterson LA, McHugh JB, Graham M, Komarck CM, Wolf GT, Walline HM, Bellile E, Riddell J 4th, Pai SI, Sidransky D, Westra WH, William WN Jr, Lee JJ, El-Naggar AK, Ferris RL, Seethala R, Grandis JR, Chen ZG, Saba NF, Shin DM; Head and Neck Cancer SPORE HIV supplement consortium.

Head Neck. 2017 Dec;39(12):2433-2443. doi: 10.1002/hed.24911. Epub 2017 Sep 25.


Advancing toward a molecular characterization of polymorphous low grade adenocarcinoma.

Wysocki PT, Westra WH, Sidransky D, Brait M.

Oral Oncol. 2017 Nov;74:192-193. doi: 10.1016/j.oraloncology.2017.09.013. Epub 2017 Sep 20. No abstract available.


Patient with antiphospholipid syndrome presenting with testicular torsion-like symptoms.

Srivastava A, Ko J, Ogunsile J, Moliterno A, Westra WH, Semerjian A.

Urol Case Rep. 2017 Sep 6;15:26-27. doi: 10.1016/j.eucr.2017.08.010. eCollection 2017 Nov.


HPV-related Multiphenotypic Sinonasal Carcinoma: An Expanded Series of 49 Cases of the Tumor Formerly Known as HPV-related Carcinoma With Adenoid Cystic Carcinoma-like Features.

Bishop JA, Andreasen S, Hang JF, Bullock MJ, Chen TY, Franchi A, Garcia JJ, Gnepp DR, Gomez-Fernandez CR, Ihrler S, Kuo YJ, Lewis JS Jr, Magliocca KR, Pambuccian S, Sandison A, Uro-Coste E, Stelow E, Kiss K, Westra WH.

Am J Surg Pathol. 2017 Dec;41(12):1690-1701. doi: 10.1097/PAS.0000000000000944.


MAML2 Rearrangements in Variant Forms of Mucoepidermoid Carcinoma: Ancillary Diagnostic Testing for the Ciliated and Warthin-like Variants.

Bishop JA, Cowan ML, Shum CH, Westra WH.

Am J Surg Pathol. 2018 Jan;42(1):130-136. doi: 10.1097/PAS.0000000000000932.


Nonuniform Distribution of High-risk Human Papillomavirus in Squamous Cell Carcinomas of the Oropharynx: Rethinking the Anatomic Boundaries of Oral and Oropharyngeal Carcinoma From an Oncologic HPV Perspective.

Gelwan E, Malm IJ, Khararjian A, Fakhry C, Bishop JA, Westra WH.

Am J Surg Pathol. 2017 Dec;41(12):1722-1728. doi: 10.1097/PAS.0000000000000929.


Utility of preoperative fine needle aspiration in parotid lesions.

Eytan DF, Yin LX, Maleki Z, Koch WM, Tufano RP, Eisele DW, Boahene KDO, Fakhry C, Bishop JA, Westra WH, Gourin CG.

Laryngoscope. 2018 Feb;128(2):398-402. doi: 10.1002/lary.26776. Epub 2017 Aug 7.



Flanders JA, Thompson ME, Palazzolo MJ, Garner MM, Reed M, Ialeggio DM, Kiupel M, Westra WH, Gamble KC.

J Zoo Wildl Med. 2017 Jun;48(2):394-403. doi: 10.1638/2016-0121R.1.


INSM1 Demonstrates Superior Performance to the Individual and Combined Use of Synaptophysin, Chromogranin and CD56 for Diagnosing Neuroendocrine Tumors of the Thoracic Cavity.

Rooper LM, Sharma R, Li QK, Illei PB, Westra WH.

Am J Surg Pathol. 2017 Nov;41(11):1561-1569. doi: 10.1097/PAS.0000000000000916.


The impact of noninvasive follicular thyroid neoplasm with papillary-like nuclear features on the performance of the Afirma gene expression classifier.

Hang JF, Westra WH, Cooper DS, Ali SZ.

Cancer Cytopathol. 2017 Sep;125(9):683-691. doi: 10.1002/cncy.21879. Epub 2017 May 24.


SMARCB1 (INI-1)-deficient Sinonasal Carcinoma: A Series of 39 Cases Expanding the Morphologic and Clinicopathologic Spectrum of a Recently Described Entity.

Agaimy A, Hartmann A, Antonescu CR, Chiosea SI, El-Mofty SK, Geddert H, Iro H, Lewis JS Jr, Märkl B, Mills SE, Riener MO, Robertson T, Sandison A, Semrau S, Simpson RH, Stelow E, Westra WH, Bishop JA.

Am J Surg Pathol. 2017 Apr;41(4):458-471. doi: 10.1097/PAS.0000000000000797.


Update from the 4th Edition of the World Health Organization Classification of Head and Neck Tumours: Oropharynx.

Westra WH, Lewis JS Jr.

Head Neck Pathol. 2017 Mar;11(1):41-47. doi: 10.1007/s12105-017-0793-2. Epub 2017 Feb 28.


The prognostic role of sex, race, and human papillomavirus in oropharyngeal and nonoropharyngeal head and neck squamous cell cancer.

Fakhry C, Westra WH, Wang SJ, van Zante A, Zhang Y, Rettig E, Yin LX, Ryan WR, Ha PK, Wentz A, Koch W, Richmon JD, Eisele DW, D'Souza G.

Cancer. 2017 May 1;123(9):1566-1575. doi: 10.1002/cncr.30353. Epub 2017 Feb 27.


Transcriptionally Active High-Risk Human Papillomavirus is Not a Common Etiologic Agent in the Malignant Transformation of Inverted Schneiderian Papillomas.

Rooper LM, Bishop JA, Westra WH.

Head Neck Pathol. 2017 Sep;11(3):346-353. doi: 10.1007/s12105-017-0779-0. Epub 2017 Feb 8.


Integrative computational analysis of transcriptional and epigenetic alterations implicates DTX1 as a putative tumor suppressor gene in HNSCC.

Gaykalova DA, Zizkova V, Guo T, Tiscareno I, Wei Y, Vatapalli R, Hennessey PT, Ahn J, Danilova L, Khan Z, Bishop JA, Gutkind JS, Koch WM, Westra WH, Fertig EJ, Ochs MF, Califano JA.

Oncotarget. 2017 Feb 28;8(9):15349-15363. doi: 10.18632/oncotarget.14856.


Evaluation of proposed staging systems for human papillomavirus-related oropharyngeal squamous cell carcinoma.

Malm IJ, Fan CJ, Yin LX, Li DX, Koch WM, Gourin CG, Pitman KT, Richmon JD, Westra WH, Kang H, Quon H, Eisele DW, Fakhry C.

Cancer. 2017 May 15;123(10):1768-1777. doi: 10.1002/cncr.30512. Epub 2017 Jan 5.


Human papillomavirus-related carcinoma with adenoid cystic-like features of the sinonasal tract: clinical and morphological characterization of six new cases.

Andreasen S, Bishop JA, Hansen TV, Westra WH, Bilde A, von Buchwald C, Kiss K.

Histopathology. 2017 May;70(6):880-888. doi: 10.1111/his.13162. Epub 2017 Feb 24.


E1308: Phase II Trial of Induction Chemotherapy Followed by Reduced-Dose Radiation and Weekly Cetuximab in Patients With HPV-Associated Resectable Squamous Cell Carcinoma of the Oropharynx- ECOG-ACRIN Cancer Research Group.

Marur S, Li S, Cmelak AJ, Gillison ML, Zhao WJ, Ferris RL, Westra WH, Gilbert J, Bauman JE, Wagner LI, Trevarthen DR, Balkrishna J, Murphy BA, Agrawal N, Colevas AD, Chung CH, Burtness B.

J Clin Oncol. 2017 Feb 10;35(5):490-497. doi: 10.1200/JCO.2016.68.3300. Epub 2016 Dec 28.


Differences in the Prevalence of Human Papillomavirus (HPV) in Head and Neck Squamous Cell Cancers by Sex, Race, Anatomic Tumor Site, and HPV Detection Method.

D'Souza G, Westra WH, Wang SJ, van Zante A, Wentz A, Kluz N, Rettig E, Ryan WR, Ha PK, Kang H, Bishop J, Quon H, Kiess AP, Richmon JD, Eisele DW, Fakhry C.

JAMA Oncol. 2016 Dec 8. doi: 10.1001/jamaoncol.2016.3067. [Epub ahead of print]


Secretory Carcinoma of the Skin Harboring ETV6 Gene Fusions: A Cutaneous Analogue to Secretory Carcinomas of the Breast and Salivary Glands.

Bishop JA, Taube JM, Su A, Binder SW, Kazakov DV, Michal M, Westra WH.

Am J Surg Pathol. 2017 Jan;41(1):62-66.


Current concepts in the diagnosis and pathobiology of intraepithelial neoplasia: A review by organ system.

Voltaggio L, Cimino-Mathews A, Bishop JA, Argani P, Cuda JD, Epstein JI, Hruban RH, Netto GJ, Stoler MH, Taube JM, Vang R, Westra WH, Montgomery EA.

CA Cancer J Clin. 2016 Sep;66(5):408-36. doi: 10.3322/caac.21350. Epub 2016 Jun 6. Review.


Biphenotypic sinonasal sarcoma: an expanded immunoprofile including consistent nuclear β-catenin positivity and absence of SOX10 expression.

Rooper LM, Huang SC, Antonescu CR, Westra WH, Bishop JA.

Hum Pathol. 2016 Sep;55:44-50. doi: 10.1016/j.humpath.2016.04.009. Epub 2016 Apr 29.


Characterization of functionally active gene fusions in human papillomavirus related oropharyngeal squamous cell carcinoma.

Guo T, Gaykalova DA, Considine M, Wheelan S, Pallavajjala A, Bishop JA, Westra WH, Ideker T, Koch WM, Khan Z, Fertig EJ, Califano JA.

Int J Cancer. 2016 Jul 15;139(2):373-82. doi: 10.1002/ijc.30081. Epub 2016 Mar 30.


Large Cell Neuroendocrine Carcinoma of the Head and Neck: A Clinicopathologic Series of 10 Cases With an Emphasis on HPV Status.

Thompson ED, Stelow EB, Mills SE, Westra WH, Bishop JA.

Am J Surg Pathol. 2016 Apr;40(4):471-8. doi: 10.1097/PAS.0000000000000580.


Outlier Analysis Defines Zinc Finger Gene Family DNA Methylation in Tumors and Saliva of Head and Neck Cancer Patients.

Gaykalova DA, Vatapalli R, Wei Y, Tsai HL, Wang H, Zhang C, Hennessey PT, Guo T, Tan M, Li R, Ahn J, Khan Z, Westra WH, Bishop JA, Zaboli D, Koch WM, Khan T, Ochs MF, Califano JA.

PLoS One. 2015 Nov 6;10(11):e0142148. doi: 10.1371/journal.pone.0142148. eCollection 2015.


Incidental findings of thyroid tissue in cervical lymph nodes: old controversy not yet resolved?

Triantafyllou A, Williams MD, Angelos P, Shah JP, Westra WH, Hunt JL, Devaney KO, Rinaldo A, Slootweg PJ, Gnepp DR, Silver C, Ferlito A.

Eur Arch Otorhinolaryngol. 2016 Oct;273(10):2867-75. doi: 10.1007/s00405-015-3786-3. Epub 2015 Oct 12. Review.


Ciliated HPV-related Carcinoma: A Well-differentiated Form of Head and Neck Carcinoma That Can Be Mistaken for a Benign Cyst.

Bishop JA, Westra WH.

Am J Surg Pathol. 2015 Nov;39(11):1591-5. doi: 10.1097/PAS.0000000000000521.


Targeted sequencing reveals clonal genetic changes in the progression of early lung neoplasms and paired circulating DNA.

Izumchenko E, Chang X, Brait M, Fertig E, Kagohara LT, Bedi A, Marchionni L, Agrawal N, Ravi R, Jones S, Hoque MO, Westra WH, Sidransky D.

Nat Commun. 2015 Sep 16;6:8258. doi: 10.1038/ncomms9258.


An integrated genome-wide approach to discover deregulated microRNAs in non-small cell lung cancer: Clinical significance of miR-23b-3p deregulation.

Begum S, Hayashi M, Ogawa T, Jabboure FJ, Brait M, Izumchenko E, Tabak S, Ahrendt SA, Westra WH, Koch W, Sidransky D, Hoque MO.

Sci Rep. 2015 Aug 28;5:13236. doi: 10.1038/srep13236.


Detection of somatic mutations and HPV in the saliva and plasma of patients with head and neck squamous cell carcinomas.

Wang Y, Springer S, Mulvey CL, Silliman N, Schaefer J, Sausen M, James N, Rettig EM, Guo T, Pickering CR, Bishop JA, Chung CH, Califano JA, Eisele DW, Fakhry C, Gourin CG, Ha PK, Kang H, Kiess A, Koch WM, Myers JN, Quon H, Richmon JD, Sidransky D, Tufano RP, Westra WH, Bettegowda C, Diaz LA Jr, Papadopoulos N, Kinzler KW, Vogelstein B, Agrawal N.

Sci Transl Med. 2015 Jun 24;7(293):293ra104. doi: 10.1126/scitranslmed.aaa8507.


A subset of prostatic basal cell carcinomas harbor the MYB rearrangement of adenoid cystic carcinoma.

Bishop JA, Yonescu R, Epstein JI, Westra WH.

Hum Pathol. 2015 Aug;46(8):1204-8. doi: 10.1016/j.humpath.2015.05.002. Epub 2015 May 22.


Neuroendocrine neoplasms of the sinonasal region.

Bell D, Hanna EY, Weber RS, DeMonte F, Triantafyllou A, Lewis JS Jr, Cardesa A, Slootweg PJ, Stenman G, Gnepp DR, Devaney KO, Rodrigo JP, Rinaldo A, Wenig BM, Westra WH, Bishop JA, Hellquist H, Hunt JL, Kusafuka K, Perez-Ordoñez B, Williams MD, Takes RP, Ferlito A.

Head Neck. 2016 Apr;38 Suppl 1:E2259-66. doi: 10.1002/hed.24152. Epub 2015 Jul 18. Review.


NF-κB and stat3 transcription factor signatures differentiate HPV-positive and HPV-negative head and neck squamous cell carcinoma.

Gaykalova DA, Manola JB, Ozawa H, Zizkova V, Morton K, Bishop JA, Sharma R, Zhang C, Michailidi C, Considine M, Tan M, Fertig EJ, Hennessey PT, Ahn J, Koch WM, Westra WH, Khan Z, Chung CH, Ochs MF, Califano JA.

Int J Cancer. 2015 Oct 15;137(8):1879-89. doi: 10.1002/ijc.29558. Epub 2015 Jun 23.


The pathology of HPV-related head and neck cancer: implications for the diagnostic pathologist.

Westra WH.

Semin Diagn Pathol. 2015 Jan;32(1):42-53. doi: 10.1053/j.semdp.2015.02.023. Epub 2015 Feb 27. Review.


Randomized phase III trial to test accelerated versus standard fractionation in combination with concurrent cisplatin for head and neck carcinomas in the Radiation Therapy Oncology Group 0129 trial: long-term report of efficacy and toxicity.

Nguyen-Tan PF, Zhang Q, Ang KK, Weber RS, Rosenthal DI, Soulieres D, Kim H, Silverman C, Raben A, Galloway TJ, Fortin A, Gore E, Westra WH, Chung CH, Jordan RC, Gillison ML, List M, Le QT.

J Clin Oncol. 2014 Dec 1;32(34):3858-66. doi: 10.1200/JCO.2014.55.3925. Epub 2014 Nov 3.

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