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Items: 1 to 50 of 104

1.

Origin of spontaneous mutations in maize has been hiding in plain sight.

Wessler SR.

Proc Natl Acad Sci U S A. 2019 May 28;116(22):10617-10619. doi: 10.1073/pnas.1906035116. Epub 2019 May 14. No abstract available.

PMID:
31088966
2.

Tracking the origin of two genetic components associated with transposable element bursts in domesticated rice.

Chen J, Lu L, Benjamin J, Diaz S, Hancock CN, Stajich JE, Wessler SR.

Nat Commun. 2019 Feb 7;10(1):641. doi: 10.1038/s41467-019-08451-3.

3.

Tracking the genome-wide outcomes of a transposable element burst over decades of amplification.

Lu L, Chen J, Robb SMC, Okumoto Y, Stajich JE, Wessler SR.

Proc Natl Acad Sci U S A. 2017 Dec 5;114(49):E10550-E10559. doi: 10.1073/pnas.1716459114. Epub 2017 Nov 20.

4.

Transposition of Mutator-like transposable elements (MULEs) resembles hAT and Transib elements and V(D)J recombination.

Liu K, Wessler SR.

Nucleic Acids Res. 2017 Jun 20;45(11):6644-6655. doi: 10.1093/nar/gkx357.

5.

RelocaTE2: a high resolution transposable element insertion site mapping tool for population resequencing.

Chen J, Wrightsman TR, Wessler SR, Stajich JE.

PeerJ. 2017 Jan 26;5:e2942. doi: 10.7717/peerj.2942. eCollection 2017.

6.

Functional characterization of the active Mutator-like transposable element, Muta1 from the mosquito Aedes aegypti.

Liu K, Wessler SR.

Mob DNA. 2017 Jan 11;8:1. doi: 10.1186/s13100-016-0084-6. eCollection 2017.

7.

Insights from a Convocation: Integrating Discovery-Based Research into the Undergraduate Curriculum.

Elgin SC, Bangera G, Decatur SM, Dolan EL, Guertin L, Newstetter WC, San Juan EF, Smith MA, Weaver GC, Wessler SR, Brenner KA, Labov JB.

CBE Life Sci Educ. 2016 Summer;15(2). pii: fe2. doi: 10.1187/cbe.16-03-0118. No abstract available.

8.

Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing.

Hellsten U, Wright KM, Jenkins J, Shu S, Yuan Y, Wessler SR, Schmutz J, Willis JH, Rokhsar DS.

Proc Natl Acad Sci U S A. 2013 Nov 26;110(48):19478-82. doi: 10.1073/pnas.1319032110. Epub 2013 Nov 13.

9.

The use of RelocaTE and unassembled short reads to produce high-resolution snapshots of transposable element generated diversity in rice.

Robb SM, Lu L, Valencia E, Burnette JM 3rd, Okumoto Y, Wessler SR, Stajich JE.

G3 (Bethesda). 2013 Jun 21;3(6):949-57. doi: 10.1534/g3.112.005348.

10.
11.

Transposing from the laboratory to the classroom to generate authentic research experiences for undergraduates.

Burnette JM 3rd, Wessler SR.

Genetics. 2013 Feb;193(2):367-75. doi: 10.1534/genetics.112.147355. Epub 2012 Nov 19.

12.

The rice miniature inverted repeat transposable element mPing is an effective insertional mutagen in soybean.

Hancock CN, Zhang F, Floyd K, Richardson AO, Lafayette P, Tucker D, Wessler SR, Parrott WA.

Plant Physiol. 2011 Oct;157(2):552-62. doi: 10.1104/pp.111.181206. Epub 2011 Aug 15.

13.

The catalytic domain of all eukaryotic cut-and-paste transposase superfamilies.

Yuan YW, Wessler SR.

Proc Natl Acad Sci U S A. 2011 May 10;108(19):7884-9. doi: 10.1073/pnas.1104208108. Epub 2011 Apr 25.

14.

MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences.

Han Y, Wessler SR.

Nucleic Acids Res. 2010 Dec;38(22):e199. doi: 10.1093/nar/gkq862. Epub 2010 Sep 29.

15.

Climate change and the integrity of science.

Gleick PH, Adams RM, Amasino RM, Anders E, Anderson DJ, Anderson WW, Anselin LE, Arroyo MK, Asfaw B, Ayala FJ, Bax A, Bebbington AJ, Bell G, Bennett MV, Bennetzen JL, Berenbaum MR, Berlin OB, Bjorkman PJ, Blackburn E, Blamont JE, Botchan MR, Boyer JS, Boyle EA, Branton D, Briggs SP, Briggs WR, Brill WJ, Britten RJ, Broecker WS, Brown JH, Brown PO, Brunger AT, Cairns J Jr, Canfield DE, Carpenter SR, Carrington JC, Cashmore AR, Castilla JC, Cazenave A, Chapin FS 3rd, Ciechanover AJ, Clapham DE, Clark WC, Clayton RN, Coe MD, Conwell EM, Cowling EB, Cowling RM, Cox CS, Croteau RB, Crothers DM, Crutzen PJ, Daily GC, Dalrymple GB, Dangl JL, Darst SA, Davies DR, Davis MB, De Camilli PV, Dean C, DeFries RS, Deisenhofer J, Delmer DP, DeLong EF, DeRosier DJ, Diener TO, Dirzo R, Dixon JE, Donoghue MJ, Doolittle RF, Dunne T, Ehrlich PR, Eisenstadt SN, Eisner T, Emanuel KA, Englander SW, Ernst WG, Falkowski PG, Feher G, Ferejohn JA, Fersht A, Fischer EH, Fischer R, Flannery KV, Frank J, Frey PA, Fridovich I, Frieden C, Futuyma DJ, Gardner WR, Garrett CJ, Gilbert W, Goldberg RB, Goodenough WH, Goodman CS, Goodman M, Greengard P, Hake S, Hammel G, Hanson S, Harrison SC, Hart SR, Hartl DL, Haselkorn R, Hawkes K, Hayes JM, Hille B, Hökfelt T, House JS, Hout M, Hunten DM, Izquierdo IA, Jagendorf AT, Janzen DH, Jeanloz R, Jencks CS, Jury WA, Kaback HR, Kailath T, Kay P, Kay SA, Kennedy D, Kerr A, Kessler RC, Khush GS, Kieffer SW, Kirch PV, Kirk K, Kivelson MG, Klinman JP, Klug A, Knopoff L, Kornberg H, Kutzbach JE, Lagarias JC, Lambeck K, Landy A, Langmuir CH, Larkins BA, Le Pichon XT, Lenski RE, Leopold EB, Levin SA, Levitt M, Likens GE, Lippincott-Schwartz J, Lorand L, Lovejoy CO, Lynch M, Mabogunje AL, Malone TF, Manabe S, Marcus J, Massey DS, McWilliams JC, Medina E, Melosh HJ, Meltzer DJ, Michener CD, Miles EL, Mooney HA, Moore PB, Morel FM, Mosley-Thompson ES, Moss B, Munk WH, Myers N, Nair GB, Nathans J, Nester EW, Nicoll RA, Novick RP, O'Connell JF, Olsen PE, Opdyke ND, Oster GF, Ostrom E, Pace NR, Paine RT, Palmiter RD, Pedlosky J, Petsko GA, Pettengill GH, Philander SG, Piperno DR, Pollard TD, Price PB Jr, Reichard PA, Reskin BF, Ricklefs RE, Rivest RL, Roberts JD, Romney AK, Rossmann MG, Russell DW, Rutter WJ, Sabloff JA, Sagdeev RZ, Sahlins MD, Salmond A, Sanes JR, Schekman R, Schellnhuber J, Schindler DW, Schmitt J, Schneider SH, Schramm VL, Sederoff RR, Shatz CJ, Sherman F, Sidman RL, Sieh K, Simons EL, Singer BH, Singer MF, Skyrms B, Sleep NH, Smith BD, Snyder SH, Sokal RR, Spencer CS, Steitz TA, Strier KB, Südhof TC, Taylor SS, Terborgh J, Thomas DH, Thompson LG, Tjian RT, Turner MG, Uyeda S, Valentine JW, Valentine JS, Van Etten JL, van Holde KE, Vaughan M, Verba S, von Hippel PH, Wake DB, Walker A, Walker JE, Watson EB, Watson PJ, Weigel D, Wessler SR, West-Eberhard MJ, White TD, Wilson WJ, Wolfenden RV, Wood JA, Woodwell GM, Wright HE Jr, Wu C, Wunsch C, Zoback ML.

Science. 2010 May 7;328(5979):689-90. doi: 10.1126/science.328.5979.689. No abstract available. Erratum in: Science. 2010 May 14;328(5980):826.

16.
17.

The B73 maize genome: complexity, diversity, and dynamics.

Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, Chen W, Yan L, Higginbotham J, Cardenas M, Waligorski J, Applebaum E, Phelps L, Falcone J, Kanchi K, Thane T, Scimone A, Thane N, Henke J, Wang T, Ruppert J, Shah N, Rotter K, Hodges J, Ingenthron E, Cordes M, Kohlberg S, Sgro J, Delgado B, Mead K, Chinwalla A, Leonard S, Crouse K, Collura K, Kudrna D, Currie J, He R, Angelova A, Rajasekar S, Mueller T, Lomeli R, Scara G, Ko A, Delaney K, Wissotski M, Lopez G, Campos D, Braidotti M, Ashley E, Golser W, Kim H, Lee S, Lin J, Dujmic Z, Kim W, Talag J, Zuccolo A, Fan C, Sebastian A, Kramer M, Spiegel L, Nascimento L, Zutavern T, Miller B, Ambroise C, Muller S, Spooner W, Narechania A, Ren L, Wei S, Kumari S, Faga B, Levy MJ, McMahan L, Van Buren P, Vaughn MW, Ying K, Yeh CT, Emrich SJ, Jia Y, Kalyanaraman A, Hsia AP, Barbazuk WB, Baucom RS, Brutnell TP, Carpita NC, Chaparro C, Chia JM, Deragon JM, Estill JC, Fu Y, Jeddeloh JA, Han Y, Lee H, Li P, Lisch DR, Liu S, Liu Z, Nagel DH, McCann MC, SanMiguel P, Myers AM, Nettleton D, Nguyen J, Penning BW, Ponnala L, Schneider KL, Schwartz DC, Sharma A, Soderlund C, Springer NM, Sun Q, Wang H, Waterman M, Westerman R, Wolfgruber TK, Yang L, Yu Y, Zhang L, Zhou S, Zhu Q, Bennetzen JL, Dawe RK, Jiang J, Jiang N, Presting GG, Wessler SR, Aluru S, Martienssen RA, Clifton SW, McCombie WR, Wing RA, Wilson RK.

Science. 2009 Nov 20;326(5956):1112-5. doi: 10.1126/science.1178534. Erratum in: Science. 2012 Aug 31;337(6098):1040.

18.

Detailed analysis of a contiguous 22-Mb region of the maize genome.

Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, Nagel DH, Collura K, Kudrna D, Currie J, Lin J, Kim H, Angelova A, Scara G, Wissotski M, Golser W, Courtney L, Kruchowski S, Graves TA, Rock SM, Adams S, Fulton LA, Fronick C, Courtney W, Kramer M, Spiegel L, Nascimento L, Kalyanaraman A, Chaparro C, Deragon JM, Miguel PS, Jiang N, Wessler SR, Green PJ, Yu Y, Schwartz DC, Meyers BC, Bennetzen JL, Martienssen RA, McCombie WR, Aluru S, Clifton SW, Schnable PS, Ware D, Wilson RK, Wing RA.

PLoS Genet. 2009 Nov;5(11):e1000728. doi: 10.1371/journal.pgen.1000728. Epub 2009 Nov 20.

19.

Unexpected consequences of a sudden and massive transposon amplification on rice gene expression.

Naito K, Zhang F, Tsukiyama T, Saito H, Hancock CN, Richardson AO, Okumoto Y, Tanisaka T, Wessler SR.

Nature. 2009 Oct 22;461(7267):1130-4. doi: 10.1038/nature08479.

PMID:
19847266
20.

Tuned for transposition: molecular determinants underlying the hyperactivity of a Stowaway MITE.

Yang G, Nagel DH, Feschotte C, Hancock CN, Wessler SR.

Science. 2009 Sep 11;325(5946):1391-4. doi: 10.1126/science.1175688.

21.

TARGeT: a web-based pipeline for retrieving and characterizing gene and transposable element families from genomic sequences.

Han Y, Burnette JM 3rd, Wessler SR.

Nucleic Acids Res. 2009 Jun;37(11):e78. doi: 10.1093/nar/gkp295. Epub 2009 May 8.

22.

High potential of a transposon mPing as a marker system in japonica x japonica cross in rice.

Monden Y, Naito K, Okumoto Y, Saito H, Oki N, Tsukiyama T, Ideta O, Nakazaki T, Wessler SR, Tanisaka T.

DNA Res. 2009 Apr;16(2):131-40. doi: 10.1093/dnares/dsp004. Epub 2009 Mar 6.

23.

QTL analysis of floral traits in Louisiana iris hybrids.

Bouck A, Wessler SR, Arnold ML.

Evolution. 2007 Oct;61(10):2308-19. Epub 2007 Aug 23.

PMID:
17725637
24.

Terminal repeat retrotransposon in miniature (TRIM) as DNA markers in Brassica relatives.

Kwon SJ, Kim DH, Lim MH, Long Y, Meng JL, Lim KB, Kim JA, Kim JS, Jin M, Kim HI, Ahn SN, Wessler SR, Yang TJ, Park BS.

Mol Genet Genomics. 2007 Oct;278(4):361-70. Epub 2007 Aug 10.

PMID:
17690909
25.

Transposition of the rice miniature inverted repeat transposable element mPing in Arabidopsis thaliana.

Yang G, Zhang F, Hancock CN, Wessler SR.

Proc Natl Acad Sci U S A. 2007 Jun 26;104(26):10962-7. Epub 2007 Jun 19.

26.

Dramatic amplification of a rice transposable element during recent domestication.

Naito K, Cho E, Yang G, Campbell MA, Yano K, Okumoto Y, Tanisaka T, Wessler SR.

Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17620-5. Epub 2006 Nov 13.

27.

Transposable elements and the evolution of eukaryotic genomes.

Wessler SR.

Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17600-1. Epub 2006 Nov 13. No abstract available.

28.

A rice Tc1/mariner-like element transposes in yeast.

Yang G, Weil CF, Wessler SR.

Plant Cell. 2006 Oct;18(10):2469-78. Epub 2006 Oct 13.

29.

The transposable element landscape of the model legume Lotus japonicus.

Holligan D, Zhang X, Jiang N, Pritham EJ, Wessler SR.

Genetics. 2006 Dec;174(4):2215-28. Epub 2006 Oct 8.

30.

Genetic mapping of species boundaries in Louisiana irises using IRRE retrotransposon display markers.

Bouck A, Peeler R, Arnold ML, Wessler SR.

Genetics. 2005 Nov;171(3):1289-303. Epub 2005 Aug 3.

31.
32.

Unexpected diversity and differential success of DNA transposons in four species of entamoeba protozoans.

Pritham EJ, Feschotte C, Wessler SR.

Mol Biol Evol. 2005 Sep;22(9):1751-63. Epub 2005 May 18.

PMID:
15901838
33.

DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs.

Feschotte C, Osterlund MT, Peeler R, Wessler SR.

Nucleic Acids Res. 2005 Apr 14;33(7):2153-65. Print 2005.

34.

The consequences of gene and genome duplication in plants.

Wessler SR, Carrington JC.

Curr Opin Plant Biol. 2005 Apr;8(2):119-21. No abstract available.

PMID:
15752989
35.

Homing into the origin of the AP2 DNA binding domain.

Wessler SR.

Trends Plant Sci. 2005 Feb;10(2):54-6. Review.

PMID:
15708341
36.

Pack-MULE transposable elements mediate gene evolution in plants.

Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR.

Nature. 2004 Sep 30;431(7008):569-73.

PMID:
15457261
37.

Genome-wide comparative analysis of the transposable elements in the related species Arabidopsis thaliana and Brassica oleracea.

Zhang X, Wessler SR.

Proc Natl Acad Sci U S A. 2004 Apr 13;101(15):5589-94. Epub 2004 Apr 2.

38.

MITE display.

Casa AM, Nagel A, Wessler SR.

Methods Mol Biol. 2004;260:175-88.

PMID:
15020809
40.

Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs).

Jiang N, Feschotte C, Zhang X, Wessler SR.

Curr Opin Plant Biol. 2004 Apr;7(2):115-9. Review.

PMID:
15003209
43.

Evaluation of Hbr (MITE) markers for assessment of genetic relationships among maize ( Zea mays L.) inbred lines.

Casa AM, Mitchell SE, Smith OS, Register JC 3rd, Wessler SR, Kresovich S.

Theor Appl Genet. 2002 Jan;104(1):104-10.

PMID:
12579434
44.

An active DNA transposon family in rice.

Jiang N, Bao Z, Zhang X, Hirochika H, Eddy SR, McCouch SR, Wessler SR.

Nature. 2003 Jan 9;421(6919):163-7.

PMID:
12520302
45.
46.

Efficient capture of unique sequences from eukaryotic genomes.

Peterson DG, Wessler SR, Paterson AH.

Trends Genet. 2002 Nov;18(11):547-50.

PMID:
12414178
47.

Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice.

Jiang N, Bao Z, Temnykh S, Cheng Z, Jiang J, Wing RA, McCouch SR, Wessler SR.

Genetics. 2002 Jul;161(3):1293-305.

48.

Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery.

Peterson DG, Schulze SR, Sciara EB, Lee SA, Bowers JE, Nagel A, Jiang N, Tibbitts DC, Wessler SR, Paterson AH.

Genome Res. 2002 May;12(5):795-807.

49.

Plant transposable elements: where genetics meets genomics.

Feschotte C, Jiang N, Wessler SR.

Nat Rev Genet. 2002 May;3(5):329-41. Review.

PMID:
11988759
50.

Mariner-like transposases are widespread and diverse in flowering plants.

Feschotte C, Wessler SR.

Proc Natl Acad Sci U S A. 2002 Jan 8;99(1):280-5. Epub 2001 Dec 26.

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