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Vital Considerations for Aspirin in Prevention of Preeclampsia, a Multifaceted Pregnancy Disorder.

Mirzakhani H, McElrath TF, Weiss ST.

JAMA Pediatr. 2019 Nov 4. doi: 10.1001/jamapediatrics.2019.4018. [Epub ahead of print] No abstract available.


Targeted deletion of NFAT-Interacting-Protein-(NIP) 45 resolves experimental asthma by inhibiting Innate Lymphoid Cells group 2 (ILC2).

Koch S, Knipfer L, Kölle J, Mirzakhani H, Graser A, Zimmermann T, Kiefer A, Melichar VO, Rascher W, Papadopoulos NG, Rieker RJ, Raby BA, Weiss ST, Wirtz S, Finotto S.

Sci Rep. 2019 Oct 30;9(1):15695. doi: 10.1038/s41598-019-51690-z.


Allergic disease and low ASQ communication score in children.

Yadama AP, Kelly RS, Lee-Sarwar K, Mirzakhani H, Chu SH, Kachroo P, Litonjua AA, Lasky-Su J, Weiss ST.

Brain Behav Immun. 2019 Oct 10. pii: S0889-1591(19)30828-1. doi: 10.1016/j.bbi.2019.10.008. [Epub ahead of print]


Whole Genome Sequencing Identifies CRISPLD2 as a Lung Function Gene in Children With Asthma.

Kachroo P, Hecker J, Chawes BL, Ahluwalia TS, Cho MH, Qiao D, Kelly RS, Chu SH, Virkud YV, Huang M, Barnes KC, Burchard EG, Eng C, Hu D, Celedón JC, Daya M, Levin AM, Gui H, Williams LK, Forno E, Mak ACY, Avila L, Soto-Quiros ME, Cloutier MM, Acosta-Pérez E, Canino G, Bønnelykke K, Bisgaard H, Raby BA, Lange C, Weiss ST, Lasky-Su JA; National Heart, Lung, and Blood Institute Trans-Omics for Precision Medicine (TOPMed) Consortium.

Chest. 2019 Sep 23. pii: S0012-3692(19)33933-9. doi: 10.1016/j.chest.2019.08.2202. [Epub ahead of print]


Pharmacogenomics and Placebo Response in a Randomized Clinical Trial in Asthma.

Wang RS, Croteau-Chonka DC, Silverman EK, Loscalzo J, Weiss ST, Hall KT.

Clin Pharmacol Ther. 2019 Sep 26. doi: 10.1002/cpt.1646. [Epub ahead of print]


Microbiome-Transcriptome Interactions Related to Severity of Respiratory Syncytial Virus Infection.

Sonawane AR, Tian L, Chu CY, Qiu X, Wang L, Holden-Wiltse J, Grier A, Gill SR, Caserta MT, Falsey AR, Topham DJ, Walsh EE, Mariani TJ, Weiss ST, Silverman EK, Glass K, Liu YY.

Sci Rep. 2019 Sep 25;9(1):13824. doi: 10.1038/s41598-019-50217-w.


Pharmacometabolomics of Bronchodilator Response in Asthma and the Role of Age-Metabolite Interactions.

Kelly RS, Sordillo JE, Lutz SM, Avila L, Soto-Quiros M, Celedón JC, McGeachie MJ, Dahlin A, Tantisira K, Huang M, Clish CB, Weiss ST, Lasky-Su J, Wu AC.

Metabolites. 2019 Sep 7;9(9). pii: E179. doi: 10.3390/metabo9090179.


Fecal short-chain fatty acids in pregnancy and offspring asthma and allergic outcomes.

Lee-Sarwar KA, Kelly RS, Lasky-Su J, Zeiger RS, O'Connor GT, Sandel MT, Bacharier LB, Beigelman A, Rifas-Shiman SL, Carey VJ, Harshfield BJ, Laranjo N, Gold DR, Weiss ST, Litonjua AA.

J Allergy Clin Immunol Pract. 2019 Sep 5. pii: S2213-2198(19)30759-7. doi: 10.1016/j.jaip.2019.08.036. [Epub ahead of print] No abstract available.


Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network.

eMERGE Consortium. Electronic address:; eMERGE Consortium.

Am J Hum Genet. 2019 Sep 5;105(3):588-605. doi: 10.1016/j.ajhg.2019.07.018. Epub 2019 Aug 22.


The role of the 17q21 genotype in the prevention of early childhood asthma and recurrent wheeze by vitamin D.

Kelly RS, Chawes BL, Guo F, Zhang L, Blighe K, Litonjua AA, Raby BA, Levy BD, Rago D, Stokholm J, Bønnelykke K, Bisgaard H, Zhou X, Lasky-Su JA, Weiss ST.

Eur Respir J. 2019 Oct 24;54(4). pii: 1900761. doi: 10.1183/13993003.00761-2019. Print 2019 Oct.


Fish-oil supplementation in pregnancy, child metabolomics and asthma risk.

Rago D, Rasmussen MA, Lee-Sarwar KA, Weiss ST, Lasky-Su J, Stokholm J, Bønnelykke K, Chawes BL, Bisgaard H.

EBioMedicine. 2019 Aug;46:399-410. doi: 10.1016/j.ebiom.2019.07.057. Epub 2019 Aug 6.


Network Diffusion Approach to Predict LncRNA Disease Associations Using Multi-Type Biological Networks: LION.

Sumathipala M, Maiorino E, Weiss ST, Sharma A.

Front Physiol. 2019 Jul 16;10:888. doi: 10.3389/fphys.2019.00888. eCollection 2019.


Fish oil supplementation during pregnancy is protective against asthma/wheeze in offspring.

Kachroo P, Kelly RS, Mirzakhani H, Lee-Sarwar K, Chawes BL, Blighe K, Davaasambuu G, Bisgaard H, Litonjua AA, Weiss ST, Lasky-Su J.

J Allergy Clin Immunol Pract. 2019 Jun 19. pii: S2213-2198(19)30553-7. doi: 10.1016/j.jaip.2019.05.054. [Epub ahead of print] No abstract available.


DNA methylation is associated with inhaled corticosteroid response in persistent childhood asthmatics.

Wang AL, Gruzieva O, Qiu W, Kebede Merid S, Celedón JC, Raby BA, Söderhäll C, DeMeo DL, Weiss ST, Melén E, Tantisira KG.

Clin Exp Allergy. 2019 Sep;49(9):1225-1234. doi: 10.1111/cea.13447. Epub 2019 Aug 15.


Maternal Asthma, Preeclampsia, and Risk for Childhood Asthma at Age Six.

Mirzakhani H, Carey VJ, McElrath TF, Hollis BW, O'Connor GT, Zeiger RS, Bacharier L, Litonjua AA, Weiss ST.

Am J Respir Crit Care Med. 2019 Sep 1;200(5):638-642. doi: 10.1164/rccm.201901-0081LE. No abstract available.


Network Medicine in the Age of Biomedical Big Data.

Sonawane AR, Weiss ST, Glass K, Sharma A.

Front Genet. 2019 Apr 11;10:294. doi: 10.3389/fgene.2019.00294. eCollection 2019. Review.


Pathway analysis of a genome-wide gene by air pollution interaction study in asthmatic children.

Ierodiakonou D, Coull BA, Zanobetti A, Postma DS, Boezen HM, Vonk JM, McKone EF, Schildcrout JS, Koppelman GH, Croteau-Chonka DC, Lumley T, Koutrakis P, Schwartz J, Gold DR, Weiss ST.

J Expo Sci Environ Epidemiol. 2019 Jun;29(4):539-547. doi: 10.1038/s41370-019-0136-3. Epub 2019 Apr 26.


Decreased Total Iron Binding Capacity May Correlate with Ruptured Intracranial Aneurysms.

Can A, Lai PMR, Castro VM, Yu S, Dligach D, Finan S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R.

Sci Rep. 2019 Apr 15;9(1):6054. doi: 10.1038/s41598-019-42622-y.


Integrative analysis of the intestinal metabolome of childhood asthma.

Lee-Sarwar KA, Kelly RS, Lasky-Su J, Zeiger RS, O'Connor GT, Sandel MT, Bacharier LB, Beigelman A, Laranjo N, Gold DR, Weiss ST, Litonjua AA.

J Allergy Clin Immunol. 2019 Aug;144(2):442-454. doi: 10.1016/j.jaci.2019.02.032. Epub 2019 Mar 23.


A Genome-Wide Analysis of the Penumbral Volume in Inbred Mice following Middle Cerebral Artery Occlusion.

Rudy RF, Charoenvimolphan N, Qian B, Berndt A, Friedlander RM, Weiss ST, Du R.

Sci Rep. 2019 Mar 25;9(1):5070. doi: 10.1038/s41598-019-41592-5.


Association of the Infant Gut Microbiome With Early Childhood Neurodevelopmental Outcomes: An Ancillary Study to the VDAART Randomized Clinical Trial.

Sordillo JE, Korrick S, Laranjo N, Carey V, Weinstock GM, Gold DR, O'Connor G, Sandel M, Bacharier LB, Beigelman A, Zeiger R, Litonjua AA, Weiss ST.

JAMA Netw Open. 2019 Mar 1;2(3):e190905. doi: 10.1001/jamanetworkopen.2019.0905.


Novel Data Transformations for RNA-seq Differential Expression Analysis.

Zhang Z, Yu D, Seo M, Hersh CP, Weiss ST, Qiu W.

Sci Rep. 2019 Mar 18;9(1):4820. doi: 10.1038/s41598-019-41315-w.


Metabolomics and Communication Skills Development in Children; Evidence from the Ages and Stages Questionnaire.

Kelly RS, Boulin A, Laranjo N, Lee-Sarwar K, Chu SH, Yadama AP, Carey V, Litonjua AA, Lasky-Su J, Weiss ST.

Metabolites. 2019 Mar 5;9(3). pii: E42. doi: 10.3390/metabo9030042.


New Statistical Methods for Constructing Robust Differential Correlation Networks to characterize the interactions among microRNAs.

Yu D, Zhang Z, Glass K, Su J, DeMeo DL, Tantisira K, Weiss ST, Qiu W.

Sci Rep. 2019 Mar 5;9(1):3499. doi: 10.1038/s41598-019-40167-8.


Epigenetic age acceleration is associated with allergy and asthma in children in Project Viva.

Peng C, Cardenas A, Rifas-Shiman SL, Hivert MF, Gold DR, Platts-Mills TA, Lin X, Oken E, Avila L, Celedón JC, Weiss ST, Baccarelli AA, Litonjua AA, DeMeo DL.

J Allergy Clin Immunol. 2019 Jun;143(6):2263-2270.e14. doi: 10.1016/j.jaci.2019.01.034. Epub 2019 Feb 6.


DNA methylation is associated with improvement in lung function on inhaled corticosteroids in pediatric asthmatics.

Wang AL, Qiu W, DeMeo DL, Raby BA, Weiss ST, Tantisira KG.

Pharmacogenet Genomics. 2019 Apr;29(3):65-68. doi: 10.1097/FPC.0000000000000366.


Current Status and Future Opportunities in Lung Precision Medicine Research with a Focus on Biomarkers. An American Thoracic Society/National Heart, Lung, and Blood Institute Research Statement.

Wu AC, Kiley JP, Noel PJ, Amur S, Burchard EG, Clancy JP, Galanter J, Inada M, Jones TK, Kropski JA, Loyd JE, Nogee LM, Raby BA, Rogers AJ, Schwartz DA, Sin DD, Spira A, Weiss ST, Young LR, Himes BE.

Am J Respir Crit Care Med. 2018 Dec 15;198(12):e116-e136. doi: 10.1164/rccm.201810-1895ST.


Large-scale, multiethnic genome-wide association study identifies novel loci contributing to asthma susceptibility in adults.

Dahlin A, Sordillo JE, Ziniti J, Iribarren C, Lu M, Weiss ST, Tantisira KG, Lu Q, Kan M, Himes BE, Jorgenson E, Wu AC.

J Allergy Clin Immunol. 2019 Apr;143(4):1633-1635. doi: 10.1016/j.jaci.2018.11.037. Epub 2018 Dec 20. No abstract available.


Gut microbiota and overweight in 3-year old children.

Karvonen AM, Sordillo JE, Gold DR, Bacharier LB, O'Connor GT, Zeiger RS, Beigelman A, Weiss ST, Litonjua AA.

Int J Obes (Lond). 2019 Apr;43(4):713-723. doi: 10.1038/s41366-018-0290-z. Epub 2018 Dec 19.


Impact of parental asthma, prenatal maternal asthma control, and vitamin D status on risk of asthma and recurrent wheeze in 3-year-old children.

Mirzakhani H, Carey VJ, Zeiger R, Bacharier LB, O'Connor GT, Schatz MX, Laranjo N, Weiss ST, Litonjua AA.

Clin Exp Allergy. 2019 Apr;49(4):419-429. doi: 10.1111/cea.13320. Epub 2019 Jan 3.


Remission of persistent childhood asthma: Early predictors of adult outcomes.

Wang AL, Datta S, Weiss ST, Tantisira KG.

J Allergy Clin Immunol. 2019 May;143(5):1752-1759.e6. doi: 10.1016/j.jaci.2018.09.038. Epub 2018 Nov 14.


Partial Least Squares Discriminant Analysis and Bayesian Networks for Metabolomic Prediction of Childhood Asthma.

Kelly RS, McGeachie MJ, Lee-Sarwar KA, Kachroo P, Chu SH, Virkud YV, Huang M, Litonjua AA, Weiss ST, Lasky-Su J.

Metabolites. 2018 Oct 23;8(4). pii: E68. doi: 10.3390/metabo8040068.


Gene Coexpression Networks in Whole Blood Implicate Multiple Interrelated Molecular Pathways in Obesity in People with Asthma.

Croteau-Chonka DC, Chen Z, Barnes KC, Barraza-Villarreal A, Celedón JC, Gauderman WJ, Gilliland FD, Krishnan JA, Liu AH, London SJ, Martinez FD, Millstein J, Naureckas ET, Nicolae DL, White SR, Ober C, Weiss ST, Raby BA.

Obesity (Silver Spring). 2018 Dec;26(12):1938-1948. doi: 10.1002/oby.22341. Epub 2018 Oct 25.


Elevated International Normalized Ratio Is Associated With Ruptured Aneurysms.

Can A, Castro VM, Dligach D, Finan S, Yu S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R.

Stroke. 2018 Sep;49(9):2046-2052. doi: 10.1161/STROKEAHA.118.022412.


Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations.

Ho NT, Li F, Lee-Sarwar KA, Tun HM, Brown BP, Pannaraj PS, Bender JM, Azad MB, Thompson AL, Weiss ST, Azcarate-Peril MA, Litonjua AA, Kozyrskyj AL, Jaspan HB, Aldrovandi GM, Kuhn L.

Nat Commun. 2018 Oct 9;9(1):4169. doi: 10.1038/s41467-018-06473-x.


The eMERGE genotype set of 83,717 subjects imputed to ~40 million variants genome wide and association with the herpes zoster medical record phenotype.

Stanaway IB, Hall TO, Rosenthal EA, Palmer M, Naranbhai V, Knevel R, Namjou-Khales B, Carroll RJ, Kiryluk K, Gordon AS, Linder J, Howell KM, Mapes BM, Lin FTJ, Joo YY, Hayes MG, Gharavi AG, Pendergrass SA, Ritchie MD, de Andrade M, Croteau-Chonka DC, Raychaudhuri S, Weiss ST, Lebo M, Amr SS, Carrell D, Larson EB, Chute CG, Rasmussen-Torvik LJ, Roy-Puckelwartz MJ, Sleiman P, Hakonarson H, Li R, Karlson EW, Peterson JF, Kullo IJ, Chisholm R, Denny JC, Jarvik GP; eMERGE Network, Crosslin DR.

Genet Epidemiol. 2019 Feb;43(1):63-81. doi: 10.1002/gepi.22167. Epub 2018 Oct 8.


An admixture mapping meta-analysis implicates genetic variation at 18q21 with asthma susceptibility in Latinos.

Gignoux CR, Torgerson DG, Pino-Yanes M, Uricchio LH, Galanter J, Roth LA, Eng C, Hu D, Nguyen EA, Huntsman S, Mathias RA, Kumar R, Rodriguez-Santana J, Thakur N, Oh SS, McGarry M, Moreno-Estrada A, Sandoval K, Winkler CA, Seibold MA, Padhukasahasram B, Conti DV, Farber HJ, Avila P, Brigino-Buenaventura E, Lenoir M, Meade K, Serebrisky D, Borrell LN, Rodriguez-Cintron W, Thyne S, Joubert BR, Romieu I, Levin AM, Sienra-Monge JJ, Del Rio-Navarro BE, Gan W, Raby BA, Weiss ST, Bleecker E, Meyers DA, Martinez FJ, Gauderman WJ, Gilliland F, London SJ, Bustamante CD, Nicolae DL, Ober C, Sen S, Barnes K, Williams LK, Hernandez RD, Burchard EG.

J Allergy Clin Immunol. 2019 Mar;143(3):957-969. doi: 10.1016/j.jaci.2016.08.057. Epub 2018 Sep 7.


Diet during Pregnancy and Infancy and the Infant Intestinal Microbiome.

Savage JH, Lee-Sarwar KA, Sordillo JE, Lange NE, Zhou Y, O'Connor GT, Sandel M, Bacharier LB, Zeiger R, Sodergren E, Weinstock GM, Gold DR, Weiss ST, Litonjua AA.

J Pediatr. 2018 Dec;203:47-54.e4. doi: 10.1016/j.jpeds.2018.07.066. Epub 2018 Aug 30.


A study paradigm integrating prospective epidemiologic cohorts and electronic health records to identify disease biomarkers.

Mosley JD, Feng Q, Wells QS, Van Driest SL, Shaffer CM, Edwards TL, Bastarache L, Wei WQ, Davis LK, McCarty CA, Thompson W, Chute CG, Jarvik GP, Gordon AS, Palmer MR, Crosslin DR, Larson EB, Carrell DS, Kullo IJ, Pacheco JA, Peissig PL, Brilliant MH, Linneman JG, Namjou B, Williams MS, Ritchie MD, Borthwick KM, Verma SS, Karnes JH, Weiss ST, Wang TJ, Stein CM, Denny JC, Roden DM.

Nat Commun. 2018 Aug 30;9(1):3522. doi: 10.1038/s41467-018-05624-4.


Impact of Preeclampsia on the Relationship between Maternal Asthma and Offspring Asthma. An Observation from the VDAART Clinical Trial.

Mirzakhani H, Carey VJ, McElrath TF, Qiu W, Hollis BW, O'Connor GT, Zeiger RS, Bacharier L, Litonjua AA, Weiss ST.

Am J Respir Crit Care Med. 2019 Jan 1;199(1):32-42. doi: 10.1164/rccm.201804-0770OC.


Dietary and Plasma Polyunsaturated Fatty Acids Are Inversely Associated with Asthma and Atopy in Early Childhood.

Lee-Sarwar K, Kelly RS, Lasky-Su J, Kachroo P, Zeiger RS, O'Connor GT, Sandel MT, Bacharier LB, Beigelman A, Laranjo N, Gold DR, Weiss ST, Litonjua AA.

J Allergy Clin Immunol Pract. 2019 Feb;7(2):529-538.e8. doi: 10.1016/j.jaip.2018.07.039. Epub 2018 Aug 24.


Association between aspirin dose and subarachnoid hemorrhage from saccular aneurysms: A case-control study.

Can A, Rudy RF, Castro VM, Yu S, Dligach D, Finan S, Gainer V, Shadick NA, Savova G, Murphy S, Cai T, Weiss ST, Du R.

Neurology. 2018 Sep 18;91(12):e1175-e1181. doi: 10.1212/WNL.0000000000006200. Epub 2018 Aug 22.


Detecting Differentially Variable MicroRNAs via Model-Based Clustering.

Li X, Fu Y, Wang X, DeMeo DL, Tantisira K, Weiss ST, Qiu W.

Int J Genomics. 2018 Jul 12;2018:6591634. doi: 10.1155/2018/6591634. eCollection 2018.


Novel eosinophilic gene expression networks associated with IgE in two distinct asthma populations.

Virkud YV, Kelly RS, Croteau-Chonka DC, Celedón JC, Dahlin A, Avila L, Raby BA, Weiss ST, Lasky-Su JA.

Clin Exp Allergy. 2018 Dec;48(12):1654-1664. doi: 10.1111/cea.13249. Epub 2018 Nov 21.


Expression network analysis reveals cord blood vitamin D-associated genes affecting risk of early life wheeze.

Mirzakhani H, Al-Garawi AA, Carey VJ, Qiu W, Litonjua AA, Weiss ST.

Thorax. 2019 Feb;74(2):200-202. doi: 10.1136/thoraxjnl-2018-211962. Epub 2018 Jul 18.


Controllability in an islet specific regulatory network identifies the transcriptional factor NFATC4, which regulates Type 2 Diabetes associated genes.

Sharma A, Halu A, Decano JL, Padi M, Liu YY, Prasad RB, Fadista J, Santolini M, Menche J, Weiss ST, Vidal M, Silverman EK, Aikawa M, Barabási AL, Groop L, Loscalzo J.

NPJ Syst Biol Appl. 2018 Jul 3;4:25. doi: 10.1038/s41540-018-0057-0. eCollection 2018.


Circulating microRNAs and prediction of asthma exacerbation in childhood asthma.

Kho AT, McGeachie MJ, Moore KG, Sylvia JM, Weiss ST, Tantisira KG.

Respir Res. 2018 Jun 26;19(1):128. doi: 10.1186/s12931-018-0828-6.


An Integrative Transcriptomic and Metabolomic Study of Lung Function in Children With Asthma.

Kelly RS, Chawes BL, Blighe K, Virkud YV, Croteau-Chonka DC, McGeachie MJ, Clish CB, Bullock K, Celedón JC, Weiss ST, Lasky-Su JA.

Chest. 2018 Aug;154(2):335-348. doi: 10.1016/j.chest.2018.05.038. Epub 2018 Jun 13.


A Nasal Brush-based Classifier of Asthma Identified by Machine Learning Analysis of Nasal RNA Sequence Data.

Pandey G, Pandey OP, Rogers AJ, Ahsen ME, Hoffman GE, Raby BA, Weiss ST, Schadt EE, Bunyavanich S.

Sci Rep. 2018 Jun 11;8(1):8826. doi: 10.1038/s41598-018-27189-4.


A systems immunology approach identifies the collective impact of 5 miRs in Th2 inflammation.

Kılıç A, Santolini M, Nakano T, Schiller M, Teranishi M, Gellert P, Ponomareva Y, Braun T, Uchida S, Weiss ST, Sharma A, Renz H.

JCI Insight. 2018 Jun 7;3(11). pii: 97503. doi: 10.1172/jci.insight.97503. eCollection 2018 Jun 7.

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