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Items: 25

1.

A brief transdiagnostic psychological intervention for Afghan asylum seekers and refugees in Austria: a randomized controlled trial.

Knefel M, Kantor V, Nicholson AA, Schiess-Jokanovic J, Weindl D, Schäfer I, Lueger-Schuster B.

Trials. 2020 Jan 9;21(1):57. doi: 10.1186/s13063-019-3839-9.

2.

Efficient parameterization of large-scale dynamic models based on relative measurements.

Schmiester L, Schälte Y, Fröhlich F, Hasenauer J, Weindl D.

Bioinformatics. 2019 Jul 26. pii: btz581. doi: 10.1093/bioinformatics/btz581. [Epub ahead of print]

PMID:
31347657
3.

Benchmarking optimization methods for parameter estimation in large kinetic models.

Villaverde AF, Fröhlich F, Weindl D, Hasenauer J, Banga JR.

Bioinformatics. 2019 Mar 1;35(5):830-838. doi: 10.1093/bioinformatics/bty736.

4.

Complex Posttraumatic Stress Disorder in Patients Exposed to Emotional Neglect and Traumatic Events: Latent Class Analysis.

Eidhof MB, Djelantik AAAMJ, Klaassens ER, Kantor V, Rittmansberger D, Sleijpen M, Steenbakkers A, Weindl D, Ter Heide FJJ.

J Trauma Stress. 2019 Feb;32(1):23-31. doi: 10.1002/jts.22363.

PMID:
30794337
5.

Efficient Parameter Estimation Enables the Prediction of Drug Response Using a Mechanistic Pan-Cancer Pathway Model.

Fröhlich F, Kessler T, Weindl D, Shadrin A, Schmiester L, Hache H, Muradyan A, Schütte M, Lim JH, Heinig M, Theis FJ, Lehrach H, Wierling C, Lange B, Hasenauer J.

Cell Syst. 2018 Dec 26;7(6):567-579.e6. doi: 10.1016/j.cels.2018.10.013. Epub 2018 Nov 28.

6.
7.

Community-driven roadmap for integrated disease maps.

Ostaszewski M, Gebel S, Kuperstein I, Mazein A, Zinovyev A, Dogrusoz U, Hasenauer J, Fleming RMT, Le Novère N, Gawron P, Ligon T, Niarakis A, Nickerson D, Weindl D, Balling R, Barillot E, Auffray C, Schneider R.

Brief Bioinform. 2019 Mar 25;20(2):659-670. doi: 10.1093/bib/bby024.

8.

Child abuse and neglect in institutional settings, cumulative lifetime traumatization, and psychopathological long-term correlates in adult survivors: The Vienna Institutional Abuse Study.

Lueger-Schuster B, Knefel M, Glück TM, Jagsch R, Kantor V, Weindl D.

Child Abuse Negl. 2018 Feb;76:488-501. doi: 10.1016/j.chiabu.2017.12.009. Epub 2017 Dec 22.

9.

Motivational capacities after prolonged interpersonal childhood trauma in institutional settings in a sample of Austrian adult survivors.

Weindl D, Knefel M, Glück TM, Tran US, Lueger-Schuster B.

Child Abuse Negl. 2018 Feb;76:194-203. doi: 10.1016/j.chiabu.2017.11.001. Epub 2017 Nov 10.

10.

PESTO: Parameter EStimation TOolbox.

Stapor P, Weindl D, Ballnus B, Hug S, Loos C, Fiedler A, Krause S, Hroß S, Fröhlich F, Hasenauer J, Wren J.

Bioinformatics. 2018 Feb 15;34(4):705-707. doi: 10.1093/bioinformatics/btx676.

11.

MIA: non-targeted mass isotopolome analysis.

Weindl D, Wegner A, Hiller K.

Bioinformatics. 2016 Sep 15;32(18):2875-6. doi: 10.1093/bioinformatics/btw317. Epub 2016 Jun 6.

12.

Bridging the gap between non-targeted stable isotope labeling and metabolic flux analysis.

Weindl D, Cordes T, Battello N, Sapcariu SC, Dong X, Wegner A, Hiller K.

Cancer Metab. 2016 Apr 23;4:10. doi: 10.1186/s40170-016-0150-z. eCollection 2016.

13.

Loss of DJ-1 impairs antioxidant response by altered glutamine and serine metabolism.

Meiser J, Delcambre S, Wegner A, Jäger C, Ghelfi J, d'Herouel AF, Dong X, Weindl D, Stautner C, Nonnenmacher Y, Michelucci A, Popp O, Giesert F, Schildknecht S, Krämer L, Schneider JG, Woitalla D, Wurst W, Skupin A, Weisenhorn DM, Krüger R, Leist M, Hiller K.

Neurobiol Dis. 2016 May;89:112-25. doi: 10.1016/j.nbd.2016.01.019. Epub 2016 Feb 1.

14.

Metabolome-Wide Analysis of Stable Isotope Labeling-Is It Worth the Effort?

Weindl D, Wegner A, Hiller K.

Front Physiol. 2015 Nov 20;6:344. doi: 10.3389/fphys.2015.00344. eCollection 2015. No abstract available.

15.

Non-targeted Tracer Fate Detection.

Weindl D, Wegner A, Hiller K.

Methods Enzymol. 2015;561:277-302. doi: 10.1016/bs.mie.2015.04.003. Epub 2015 Jun 14. Review.

PMID:
26358908
16.

Aspects of social support and disclosure in the context of institutional abuse - long-term impact on mental health.

Lueger-Schuster B, Butollo A, Moy Y, Jagsch R, Glück T, Kantor V, Knefel M, Weindl D.

BMC Psychol. 2015 Jun 19;3(1):19. doi: 10.1186/s40359-015-0077-0. eCollection 2015.

17.

Isotopologue ratio normalization for non-targeted metabolomics.

Weindl D, Wegner A, Jäger C, Hiller K.

J Chromatogr A. 2015 Apr 10;1389:112-9. doi: 10.1016/j.chroma.2015.02.025. Epub 2015 Feb 17.

18.

How metabolites modulate metabolic flux.

Wegner A, Meiser J, Weindl D, Hiller K.

Curr Opin Biotechnol. 2015 Aug;34:16-22. doi: 10.1016/j.copbio.2014.11.008. Epub 2014 Nov 26. Review.

19.

Resilience and mental health in adult survivors of child abuse associated with the institution of the Austrian Catholic Church.

Lueger-Schuster B, Weindl D, Kantor V, Knefel M, Glück T, Moy Y, Butollo A, Jagsch R.

J Trauma Stress. 2014 Oct;27(5):568-75. doi: 10.1002/jts.21958.

PMID:
25322886
20.

Fragment formula calculator (FFC): determination of chemical formulas for fragment ions in mass spectrometric data.

Wegner A, Weindl D, Jäger C, Sapcariu SC, Dong X, Stephanopoulos G, Hiller K.

Anal Chem. 2014 Feb 18;86(4):2221-8. doi: 10.1021/ac403879d. Epub 2014 Feb 5.

21.

Simultaneous extraction of proteins and metabolites from cells in culture.

Sapcariu SC, Kanashova T, Weindl D, Ghelfi J, Dittmar G, Hiller K.

MethodsX. 2014 Jul 18;1:74-80. doi: 10.1016/j.mex.2014.07.002. eCollection 2014.

22.

Institutional abuse of children in the Austrian Catholic Church: types of abuse and impact on adult survivors' current mental health.

Lueger-Schuster B, Kantor V, Weindl D, Knefel M, Moy Y, Butollo A, Jagsch R, Glück T.

Child Abuse Negl. 2014 Jan;38(1):52-64. doi: 10.1016/j.chiabu.2013.07.013. Epub 2013 Sep 7.

PMID:
24018068
23.

Complexity of dopamine metabolism.

Meiser J, Weindl D, Hiller K.

Cell Commun Signal. 2013 May 17;11(1):34. doi: 10.1186/1478-811X-11-34.

24.

Isotope cluster-based compound matching in gas chromatography/mass spectrometry for non-targeted metabolomics.

Wegner A, Sapcariu SC, Weindl D, Hiller K.

Anal Chem. 2013 Apr 16;85(8):4030-7. doi: 10.1021/ac303774z. Epub 2013 Apr 5.

PMID:
23514283
25.

NTFD--a stand-alone application for the non-targeted detection of stable isotope-labeled compounds in GC/MS data.

Hiller K, Wegner A, Weindl D, Cordes T, Metallo CM, Kelleher JK, Stephanopoulos G.

Bioinformatics. 2013 May 1;29(9):1226-8. doi: 10.1093/bioinformatics/btt119. Epub 2013 Mar 11.

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