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Items: 1 to 50 of 95

1.

Bacterial Swarming Reduces Proteus mirabilis and Vibrio parahaemolyticus Cell Stiffness and Increases β-Lactam Susceptibility.

Auer GK, Oliver PM, Rajendram M, Lin TY, Yao Q, Jensen GJ, Weibel DB.

MBio. 2019 Oct 8;10(5). pii: e00210-19. doi: 10.1128/mBio.00210-19.

2.

Maspin binds to cardiolipin in mitochondria and triggers apoptosis.

Mahajan N, Hoover B, Rajendram M, Shi HY, Kawasaki K, Weibel DB, Zhang M.

FASEB J. 2019 May;33(5):6354-6364. doi: 10.1096/fj.201802182R. Epub 2019 Feb 20.

PMID:
30786218
3.

Cardiolipin Alters Rhodobacter sphaeroides Cell Shape by Affecting Peptidoglycan Precursor Biosynthesis.

Lin TY, Gross WS, Auer GK, Weibel DB.

MBio. 2019 Feb 19;10(1). pii: e02401-18. doi: 10.1128/mBio.02401-18.

4.

Rcs Phosphorelay Activation in Cardiolipin-Deficient Escherichia coli Reduces Biofilm Formation.

Nepper JF, Lin YC, Weibel DB.

J Bacteriol. 2019 Apr 9;201(9). pii: e00804-18. doi: 10.1128/JB.00804-18. Print 2019 May 1.

5.

The Oral Bacterium Fusobacterium nucleatum Binds Staphylococcus aureus and Alters Expression of the Staphylococcal Accessory Regulator sarA.

Lima BP, Hu LI, Vreeman GW, Weibel DB, Lux R.

Microb Ecol. 2019 Aug;78(2):336-347. doi: 10.1007/s00248-018-1291-0. Epub 2018 Nov 24.

PMID:
30474730
6.

Mechanical Genomic Studies Reveal the Role of d-Alanine Metabolism in Pseudomonas aeruginosa Cell Stiffness.

Trivedi RR, Crooks JA, Auer GK, Pendry J, Foik IP, Siryaporn A, Abbott NL, Gitai Z, Weibel DB.

MBio. 2018 Sep 11;9(5). pii: e01340-18. doi: 10.1128/mBio.01340-18.

7.

The outer membrane is an essential load-bearing element in Gram-negative bacteria.

Rojas ER, Billings G, Odermatt PD, Auer GK, Zhu L, Miguel A, Chang F, Weibel DB, Theriot JA, Huang KC.

Nature. 2018 Jul;559(7715):617-621. doi: 10.1038/s41586-018-0344-3. Epub 2018 Jul 18.

8.

Laboratory Activity Using Accessible Microfluidics to Study Nematode Behavior in an Electrical Field.

Clawson ED, Blair V, Nepper JF, Stilwell MD, Tangen T, Weibel DB.

J Microbiol Biol Educ. 2018 Apr 27;19(1). pii: 19.1.58. doi: 10.1128/jmbe.v19i1.1551. eCollection 2018. No abstract available.

9.

Imaging mycobacterial growth and division with a fluorogenic probe.

Hodges HL, Brown RA, Crooks JA, Weibel DB, Kiessling LL.

Proc Natl Acad Sci U S A. 2018 May 15;115(20):5271-5276. doi: 10.1073/pnas.1720996115. Epub 2018 Apr 27.

10.

Studying the Symbiotic Bacterium Xenorhabdus nematophila in Individual, Living Steinernema carpocapsae Nematodes Using Microfluidic Systems.

Stilwell MD, Cao M, Goodrich-Blair H, Weibel DB.

mSphere. 2018 Jan 3;3(1). pii: e00530-17. doi: 10.1128/mSphere.00530-17. eCollection 2018 Jan-Feb.

11.

The FtsLB subcomplex of the bacterial divisome is a tetramer with an uninterrupted FtsL helix linking the transmembrane and periplasmic regions.

Condon SGF, Mahbuba DA, Armstrong CR, Diaz-Vazquez G, Craven SJ, LaPointe LM, Khadria AS, Chadda R, Crooks JA, Rangarajan N, Weibel DB, Hoskins AA, Robertson JL, Cui Q, Senes A.

J Biol Chem. 2018 Feb 2;293(5):1623-1641. doi: 10.1074/jbc.RA117.000426. Epub 2017 Dec 12.

12.

Small Molecule Chelators Reveal That Iron Starvation Inhibits Late Stages of Bacterial Cytokinesis.

Santos TMA, Lammers MG, Zhou M, Sparks IL, Rajendran M, Fang D, De Jesus CLY, Carneiro GFR, Cui Q, Weibel DB.

ACS Chem Biol. 2018 Jan 19;13(1):235-246. doi: 10.1021/acschembio.7b00560. Epub 2017 Dec 20.

13.

Mechanical strain sensing implicated in cell shape recovery in Escherichia coli.

Wong F, Renner LD, Özbaykal G, Paulose J, Weibel DB, van Teeffelen S, Amir A.

Nat Microbiol. 2017 Jul 24;2:17115. doi: 10.1038/nmicrobiol.2017.115.

14.

Bacterial Cell Mechanics.

Auer GK, Weibel DB.

Biochemistry. 2017 Jul 25;56(29):3710-3724. doi: 10.1021/acs.biochem.7b00346. Epub 2017 Jul 11. Review.

15.

Targeting quinolone- and aminocoumarin-resistant bacteria with new gyramide analogs that inhibit DNA gyrase.

Hurley KA, Santos TMA, Fensterwald MR, Rajendran M, Moore JT, Balmond EI, Blahnik BJ, Faulkner KC, Foss MH, Heinrich VA, Lammers MG, Moore LC, Reynolds GD, Shearn-Nance GP, Stearns BA, Yao ZW, Shaw JT, Weibel DB.

Medchemcomm. 2017;8(5):942-951. doi: 10.1039/C7MD00012J. Epub 2017 Feb 27.

16.

Detection of ESKAPE Bacterial Pathogens at the Point of Care Using Isothermal DNA-Based Assays in a Portable Degas-Actuated Microfluidic Diagnostic Assay Platform.

Renner LD, Zan J, Hu LI, Martinez M, Resto PJ, Siegel AC, Torres C, Hall SB, Slezak TR, Nguyen TH, Weibel DB.

Appl Environ Microbiol. 2017 Feb 1;83(4). pii: e02449-16. doi: 10.1128/AEM.02449-16. Print 2017 Feb 15.

17.

5-Alkyloxytryptamines are membrane-targeting, broad-spectrum antibiotics.

Faulkner KC, Hurley KA, Weibel DB.

Bioorg Med Chem Lett. 2016 Nov 15;26(22):5539-5544. doi: 10.1016/j.bmcl.2016.10.004. Epub 2016 Oct 5.

18.

Direct Correlation between Motile Behavior and Protein Abundance in Single Cells.

Dufour YS, Gillet S, Frankel NW, Weibel DB, Emonet T.

PLoS Comput Biol. 2016 Sep 6;12(9):e1005041. doi: 10.1371/journal.pcbi.1005041. eCollection 2016 Sep. Erratum in: PLoS Comput Biol. 2016 Sep 30;12(9):e1005149.

19.

Mechanical Genomics Identifies Diverse Modulators of Bacterial Cell Stiffness.

Auer GK, Lee TK, Rajendram M, Cesar S, Miguel A, Huang KC, Weibel DB.

Cell Syst. 2016 Jun 22;2(6):402-11. doi: 10.1016/j.cels.2016.05.006. Epub 2016 Jun 16.

20.

Straining soft colloids in aqueous nematic liquid crystals.

Mushenheim PC, Pendery JS, Weibel DB, Spagnolie SE, Abbott NL.

Proc Natl Acad Sci U S A. 2016 May 17;113(20):5564-9. doi: 10.1073/pnas.1600836113. Epub 2016 May 2.

21.

Ionic Hydrogen Bonds and Lipid Packing Defects Determine the Binding Orientation and Insertion Depth of RecA on Multicomponent Lipid Bilayers.

Zhang L, Rajendram M, Weibel DB, Yethiraj A, Cui Q.

J Phys Chem B. 2016 Aug 25;120(33):8424-37. doi: 10.1021/acs.jpcb.6b02164. Epub 2016 May 2.

PMID:
27095675
22.

Organization and function of anionic phospholipids in bacteria.

Lin TY, Weibel DB.

Appl Microbiol Biotechnol. 2016 May;100(10):4255-67. doi: 10.1007/s00253-016-7468-x. Epub 2016 Mar 30. Review.

PMID:
27026177
23.

Targeting the Bacterial Division Protein FtsZ.

Hurley KA, Santos TM, Nepomuceno GM, Huynh V, Shaw JT, Weibel DB.

J Med Chem. 2016 Aug 11;59(15):6975-98. doi: 10.1021/acs.jmedchem.5b01098. Epub 2016 Mar 10. Review.

PMID:
26756351
24.

Anionic Phospholipids Stabilize RecA Filament Bundles in Escherichia coli.

Rajendram M, Zhang L, Reynolds BJ, Auer GK, Tuson HH, Ngo KV, Cox MM, Yethiraj A, Cui Q, Weibel DB.

Mol Cell. 2015 Nov 5;60(3):374-84. doi: 10.1016/j.molcel.2015.09.009. Epub 2015 Oct 17.

25.

Bacterial transport of colloids in liquid crystalline environments.

Trivedi RR, Maeda R, Abbott NL, Spagnolie SE, Weibel DB.

Soft Matter. 2015 Nov 21;11(43):8404-8. doi: 10.1039/c5sm02041g.

PMID:
26382153
26.

Decoding the Chemical Language of Motile Bacteria by Using High-Throughput Microfluidic Assays.

Crooks JA, Stilwell MD, Oliver PM, Zhong Z, Weibel DB.

Chembiochem. 2015 Oct 12;16(15):2151-5. doi: 10.1002/cbic.201500324. Epub 2015 Sep 9.

27.

A Cardiolipin-Deficient Mutant of Rhodobacter sphaeroides Has an Altered Cell Shape and Is Impaired in Biofilm Formation.

Lin TY, Santos TM, Kontur WS, Donohue TJ, Weibel DB.

J Bacteriol. 2015 Nov;197(21):3446-55. doi: 10.1128/JB.00420-15. Epub 2015 Aug 17.

28.

Effects of confinement, surface-induced orientations and strain on dynamical behaviors of bacteria in thin liquid crystalline films.

Mushenheim PC, Trivedi RR, Roy SS, Arnold MS, Weibel DB, Abbott NL.

Soft Matter. 2015 Sep 14;11(34):6821-31. doi: 10.1039/c5sm01489a. Epub 2015 Jul 30.

29.

Field-Applicable Recombinase Polymerase Amplification Assay for Rapid Detection of Mycoplasma capricolum subsp. capripneumoniae.

Liljander A, Yu M, O'Brien E, Heller M, Nepper JF, Weibel DB, Gluecks I, Younan M, Frey J, Falquet L, Jores J.

J Clin Microbiol. 2015 Sep;53(9):2810-5. doi: 10.1128/JCM.00623-15. Epub 2015 Jun 17.

30.

Enabling the Development and Deployment of Next Generation Point-of-Care Diagnostics.

Derda R, Gitaka J, Klapperich CM, Mace CR, Kumar AA, Lieberman M, Linnes JC, Jores J, Nasimolo J, Ndung'u J, Taracha E, Weaver A, Weibel DB, Kariuki TM, Yager P.

PLoS Negl Trop Dis. 2015 May 14;9(5):e0003676. doi: 10.1371/journal.pntd.0003676. eCollection 2015 May. No abstract available. Erratum in: PLoS Negl Trop Dis. 2015 Jun;9(6):e0003857.

31.

Membrane-Targeting DCAP Analogues with Broad-Spectrum Antibiotic Activity against Pathogenic Bacteria.

Hurley KA, Heinrich VA, Hershfield JR, Demons ST, Weibel DB.

ACS Med Chem Lett. 2015 Mar 1;6(4):466-71. doi: 10.1021/acsmedchemlett.5b00024. eCollection 2015 Apr 9.

32.

Microfluidics for High School Chemistry Students.

Hemling M, Crooks JA, Oliver PM, Brenner K, Gilbertson J, Lisensky GC, Weibel DB.

J Chem Educ. 2014 Jan 14;91(1):112-115.

33.

Agarose particle-templated porous bacterial cellulose and its application in cartilage growth in vitro.

Yin N, Stilwell MD, Santos TMA, Wang H, Weibel DB.

Acta Biomater. 2015 Jan;12:129-138. doi: 10.1016/j.actbio.2014.10.019. Epub 2014 Oct 27.

34.

Localization of anionic phospholipids in Escherichia coli cells.

Oliver PM, Crooks JA, Leidl M, Yoon EJ, Saghatelian A, Weibel DB.

J Bacteriol. 2014 Oct;196(19):3386-98. doi: 10.1128/JB.01877-14. Epub 2014 Jul 7.

35.

Using liquid crystals to reveal how mechanical anisotropy changes interfacial behaviors of motile bacteria.

Mushenheim PC, Trivedi RR, Weibel DB, Abbott NL.

Biophys J. 2014 Jul 1;107(1):255-65. doi: 10.1016/j.bpj.2014.04.047.

36.

Polar localization of Escherichia coli chemoreceptors requires an intact Tol-Pal complex.

Santos TM, Lin TY, Rajendran M, Anderson SM, Weibel DB.

Mol Microbiol. 2014 Jun;92(5):985-1004. doi: 10.1111/mmi.12609. Epub 2014 May 2.

37.

Gyramides prevent bacterial growth by inhibiting DNA gyrase and altering chromosome topology.

Rajendram M, Hurley KA, Foss MH, Thornton KM, Moore JT, Shaw JT, Weibel DB.

ACS Chem Biol. 2014 Jun 20;9(6):1312-9. doi: 10.1021/cb500154m. Epub 2014 Apr 22.

38.

Dynamic self-assembly of motile bacteria in liquid crystals.

Mushenheim PC, Trivedi RR, Tuson HH, Weibel DB, Abbott NL.

Soft Matter. 2014 Jan 7;10(1):88-95. doi: 10.1039/c3sm52423j.

39.

Bacterial cellulose as a substrate for microbial cell culture.

Yin N, Santos TM, Auer GK, Crooks JA, Oliver PM, Weibel DB.

Appl Environ Microbiol. 2014 Mar;80(6):1926-32. doi: 10.1128/AEM.03452-13. Epub 2014 Jan 17.

40.

Studying biomolecule localization by engineering bacterial cell wall curvature.

Renner LD, Eswaramoorthy P, Ramamurthi KS, Weibel DB.

PLoS One. 2013 Dec 31;8(12):e84143. doi: 10.1371/journal.pone.0084143. eCollection 2013.

41.

A chemist building paths to cell biology.

Weibel DB.

Mol Biol Cell. 2013 Nov;24(21):3264-6. doi: 10.1091/mbc.E13-07-0401.

42.

From swimming to swarming: Escherichia coli cell motility in two-dimensions.

Swiecicki JM, Sliusarenko O, Weibel DB.

Integr Biol (Camb). 2013 Dec;5(12):1490-4. doi: 10.1039/c3ib40130h.

43.

Structure-activity studies of divin: an inhibitor of bacterial cell division.

Zhou M, Eun YJ, Guzei IA, Weibel DB.

ACS Med Chem Lett. 2013 Sep 12;4(9):880-885.

44.

Bacteria-surface interactions.

Tuson HH, Weibel DB.

Soft Matter. 2013 May 14;9(18):4368-4380.

45.

Bacterial growth and adaptation in microdroplet chemostats.

Jakiela S, Kaminski TS, Cybulski O, Weibel DB, Garstecki P.

Angew Chem Int Ed Engl. 2013 Aug 19;52(34):8908-11. doi: 10.1002/anie.201301524. Epub 2013 Jul 5. No abstract available.

46.

Divin: a small molecule inhibitor of bacterial divisome assembly.

Eun YJ, Zhou M, Kiekebusch D, Schlimpert S, Trivedi RR, Bakshi S, Zhong Z, Wahlig TA, Thanbichler M, Weibel DB.

J Am Chem Soc. 2013 Jul 3;135(26):9768-76. doi: 10.1021/ja404640f. Epub 2013 Jun 18.

47.

Draft Genome Sequences of Two Pairs of Human Intestinal Bifidobacterium longum subsp. longum Strains, 44B and 1-6B and 35B and 2-2B, Consecutively Isolated from Two Children after a 5-Year Time Period.

Shkoporov AN, Efimov BA, Khokhlova EV, Chaplin AV, Kafarskaya LI, Durkin AS, McCorrison J, Torralba M, Gillis M, Sutton G, Weibel DB, Nelson KE, Smeianov VV.

Genome Announc. 2013 May 16;1(3). pii: e00234-13. doi: 10.1128/genomeA.00234-13.

48.

Inhibitors of bacterial tubulin target bacterial membranes in vivo.

Foss MH, Eun YJ, Grove CI, Pauw DA, Sorto NA, Rensvold JW, Pagliarini DJ, Shaw JT, Weibel DB.

Medchemcomm. 2013 Jan 1;4(1):112-119. Epub 2012 Jul 18.

49.

Flagellum density regulates Proteus mirabilis swarmer cell motility in viscous environments.

Tuson HH, Copeland MF, Carey S, Sacotte R, Weibel DB.

J Bacteriol. 2013 Jan;195(2):368-77. doi: 10.1128/JB.01537-12. Epub 2012 Nov 9.

50.

MinD and MinE interact with anionic phospholipids and regulate division plane formation in Escherichia coli.

Renner LD, Weibel DB.

J Biol Chem. 2012 Nov 9;287(46):38835-44. doi: 10.1074/jbc.M112.407817. Epub 2012 Sep 25.

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