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Items: 1 to 50 of 65

1.

Determination of optimal time window for cortical mapping in awake craniotomy: assessment of intraoperative reaction speed.

Meskelevicius D, Schäfer A, Weber JK, Hegmann L, Haddad L, Kamp MA, Mainzer B, Rapp M, Steiger HJ, Sabel M.

Neurosurg Rev. 2019 Mar 15. doi: 10.1007/s10143-019-01094-4. [Epub ahead of print]

PMID:
30877481
2.

Rare Dissipative Transitions Punctuate the Initiation of Chemical Denaturation in Proteins.

Weber JK, Kang SG, Zhou R.

Biophys J. 2018 Feb 27;114(4):812-821. doi: 10.1016/j.bpj.2017.12.038.

3.

T cell receptors for the HIV KK10 epitope from patients with differential immunologic control are functionally indistinguishable.

Joglekar AV, Liu Z, Weber JK, Ouyang Y, Jeppson JD, Noh WJ, Lamothe-Molina PA, Chen H, Kang SG, Bethune MT, Zhou R, Walker BD, Baltimore D.

Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):1877-1882. doi: 10.1073/pnas.1718659115. Epub 2018 Feb 7.

4.

Corium lavas: structure and properties of molten UO2-ZrO2 under meltdown conditions.

Alderman OLG, Benmore CJ, Weber JKR, Skinner LB, Tamalonis AJ, Sendelbach S, Hebden A, Williamson MA.

Sci Rep. 2018 Feb 5;8(1):2434. doi: 10.1038/s41598-018-20817-z.

5.

Structure and Liquid Fragility in Sodium Carbonate.

Wilson M, Ribeiro MCC, Wilding MC, Benmore C, Weber JKR, Alderman O, Tamalonis A, Parise JB.

J Phys Chem A. 2018 Feb 1;122(4):1071-1076. doi: 10.1021/acs.jpca.7b10712. Epub 2018 Jan 18.

PMID:
29243931
6.

Patient HLA class I genotype influences cancer response to checkpoint blockade immunotherapy.

Chowell D, Morris LGT, Grigg CM, Weber JK, Samstein RM, Makarov V, Kuo F, Kendall SM, Requena D, Riaz N, Greenbaum B, Carroll J, Garon E, Hyman DM, Zehir A, Solit D, Berger M, Zhou R, Rizvi NA, Chan TA.

Science. 2018 Feb 2;359(6375):582-587. doi: 10.1126/science.aao4572. Epub 2017 Dec 7.

7.

The Structure of Liquid and Amorphous Hafnia.

Gallington LC, Ghadar Y, Skinner LB, Weber JKR, Ushakov SV, Navrotsky A, Vazquez-Mayagoitia A, Neuefeind JC, Stan M, Low JJ, Benmore CJ.

Materials (Basel). 2017 Nov 10;10(11). pii: E1290. doi: 10.3390/ma10111290.

8.

Molecular mechanism of Gd@C82(OH)22 increasing collagen expression: Implication for encaging tumor.

Liu J, Kang SG, Wang P, Wang Y, Lv X, Liu Y, Wang F, Gu Z, Yang Z, Weber JK, Tao N, Qin Z, Miao Q, Chen C, Zhou R, Zhao Y.

Biomaterials. 2018 Jan;152:24-36. doi: 10.1016/j.biomaterials.2017.10.027. Epub 2017 Oct 16.

PMID:
29080421
9.

Phosphatidylserine-Induced Conformational Modulation of Immune Cell Exhaustion-Associated Receptor TIM3.

Weber JK, Zhou R.

Sci Rep. 2017 Oct 19;7(1):13579. doi: 10.1038/s41598-017-14064-x.

10.

The structure of liquid alkali nitrates and nitrites.

Wilding MC, Wilson M, Ribeiro MCC, Benmore CJ, Weber JKR, Alderman OLG, Tamalonis A, Parise JB.

Phys Chem Chem Phys. 2017 Aug 16;19(32):21625-21638. doi: 10.1039/c7cp03465b.

PMID:
28766680
11.

Directional mechanical stability of Bacteriophage φ29 motor's 3WJ-pRNA: Extraordinary robustness along portal axis.

Xu Z, Sun Y, Weber JK, Cao Y, Wang W, Jasinski D, Guo P, Zhou R, Li J.

Sci Adv. 2017 May 26;3(5):e1601684. doi: 10.1126/sciadv.1601684. eCollection 2017 May.

12.

PEGylated graphene oxide elicits strong immunological responses despite surface passivation.

Luo N, Weber JK, Wang S, Luan B, Yue H, Xi X, Du J, Yang Z, Wei W, Zhou R, Ma G.

Nat Commun. 2017 Feb 24;8:14537. doi: 10.1038/ncomms14537.

13.

Graphene-Induced Pore Formation on Cell Membranes.

Duan G, Zhang Y, Luan B, Weber JK, Zhou RW, Yang Z, Zhao L, Xu J, Luo J, Zhou R.

Sci Rep. 2017 Feb 20;7:42767. doi: 10.1038/srep42767.

14.

A Systematic and Meta-Analysis of Mortality in Experimental Mouse Models Analyzing Delayed Cerebral Ischemia After Subarachnoid Hemorrhage.

Kamp MA, Lieshout JHV, Dibué-Adjei M, Weber JK, Schneider T, Restin T, Fischer I, Steiger HJ.

Transl Stroke Res. 2017 Jun;8(3):206-219. doi: 10.1007/s12975-016-0513-3. Epub 2017 Jan 30.

PMID:
28138916
15.

Aerodynamic levitator for in situ x-ray structure measurements on high temperature and molten nuclear fuel materials.

Weber JK, Tamalonis A, Benmore CJ, Alderman OL, Sendelbach S, Hebden A, Williamson MA.

Rev Sci Instrum. 2016 Jul;87(7):073902. doi: 10.1063/1.4955210.

PMID:
27475566
16.

Folding and Stabilization of Native-Sequence-Reversed Proteins.

Zhang Y, Weber JK, Zhou R.

Sci Rep. 2016 Apr 26;6:25138. doi: 10.1038/srep25138.

17.

Low-Dimensional Network Formation in Molten Sodium Carbonate.

Wilding MC, Wilson M, Alderman OL, Benmore C, Weber JK, Parise JB, Tamalonis A, Skinner L.

Sci Rep. 2016 Apr 15;6:24415. doi: 10.1038/srep24415.

18.

Using containerless methods to develop amorphous pharmaceuticals.

Weber JKR, Benmore CJ, Suthar KJ, Tamalonis AJ, Alderman OLG, Sendelbach S, Kondev V, Yarger J, Rey CA, Byrn SR.

Biochim Biophys Acta Gen Subj. 2017 Jan;1861(1 Pt B):3686-3692. doi: 10.1016/j.bbagen.2016.03.037. Epub 2016 Apr 6.

PMID:
27062908
19.

Single-Walled Carbon Nanotubes Inhibit the Cytochrome P450 Enzyme, CYP3A4.

El-Sayed R, Bhattacharya K, Gu Z, Yang Z, Weber JK, Li H, Leifer K, Zhao Y, Toprak MS, Zhou R, Fadeel B.

Sci Rep. 2016 Feb 22;6:21316. doi: 10.1038/srep21316.

20.

Sequential protein unfolding through a carbon nanotube pore.

Xu Z, Zhang S, Weber JK, Luan B, Zhou R, Li J.

Nanoscale. 2016 Jun 16;8(24):12143-51. doi: 10.1039/c6nr00410e.

PMID:
26899409
21.

Tunable, Strain-Controlled Nanoporous MoS₂ Filter for Water Desalination.

Li W, Yang Y, Weber JK, Zhang G, Zhou R.

ACS Nano. 2016 Feb 23;10(2):1829-35. doi: 10.1021/acsnano.5b05250. Epub 2016 Jan 27.

PMID:
26800095
22.

Topological ordering in liquid UO2.

Benmore CJ, Skinner LB, Lee B, Weber JK, Parise JB, Williamson M.

J Phys Condens Matter. 2016 Jan 13;28(1):015102. doi: 10.1088/0953-8984/28/1/015102. Epub 2015 Dec 10.

PMID:
26656592
23.

Potential-based dynamical reweighting for Markov state models of protein dynamics.

Weber JK, Pande VS.

J Chem Theory Comput. 2015 Jun 9;11(6):2412-20. doi: 10.1021/acs.jctc.5b00031.

PMID:
26575541
24.

Liquid B2O3 up to 1700 K: x-ray diffraction and boroxol ring dissolution.

Alderman OL, Ferlat G, Baroni A, Salanne M, Micoulaut M, Benmore CJ, Lin A, Tamalonis A, Weber JK.

J Phys Condens Matter. 2015 Nov 18;27(45):455104.

PMID:
26499978
25.

Note: Detector collimators for the nanoscale ordered materials diffractometer instrument at the Spallation Neutron Source.

Tamalonis A, Weber JK, Neuefeind JC, Carruth J, Skinner LB, Alderman OL, Benmore CJ.

Rev Sci Instrum. 2015 Sep;86(9):096105. doi: 10.1063/1.4930279.

PMID:
26429492
26.

A novel form of β-strand assembly observed in Aβ(33-42) adsorbed onto graphene.

Wang X, Weber JK, Liu L, Dong M, Zhou R, Li J.

Nanoscale. 2015 Oct 7;7(37):15341-8. doi: 10.1039/c5nr00555h.

PMID:
26331805
27.

Heat dissipation guides activation in signaling proteins.

Weber JK, Shukla D, Pande VS.

Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10377-82. doi: 10.1073/pnas.1501804112. Epub 2015 Aug 3.

28.

A Peptide-Coated Gold Nanocluster Exhibits Unique Behavior in Protein Activity Inhibition.

An D, Su J, Weber JK, Gao X, Zhou R, Li J.

J Am Chem Soc. 2015 Jul 8;137(26):8412-8. doi: 10.1021/jacs.5b00888. Epub 2015 Jun 29.

PMID:
26084190
29.

Percolation-like phase transitions in network models of protein dynamics.

Weber JK, Pande VS.

J Chem Phys. 2015 Jun 7;142(21):215105. doi: 10.1063/1.4921989.

30.

Surface Curvature Relation to Protein Adsorption for Carbon-based Nanomaterials.

Gu Z, Yang Z, Chong Y, Ge C, Weber JK, Bell DR, Zhou R.

Sci Rep. 2015 Jun 4;5:10886. doi: 10.1038/srep10886.

31.

Reduced Cytotoxicity of Graphene Nanosheets Mediated by Blood-Protein Coating.

Chong Y, Ge C, Yang Z, Garate JA, Gu Z, Weber JK, Liu J, Zhou R.

ACS Nano. 2015 Jun 23;9(6):5713-24. doi: 10.1021/nn5066606. Epub 2015 Jun 9.

PMID:
26040772
32.

Entropy-production-driven oscillators in simple nonequilibrium networks.

Weber JK, Pande VS.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Mar;91(3):032136. Epub 2015 Mar 24.

PMID:
25871083
33.

Markov state models provide insights into dynamic modulation of protein function.

Shukla D, Hernández CX, Weber JK, Pande VS.

Acc Chem Res. 2015 Feb 17;48(2):414-22. doi: 10.1021/ar5002999. Epub 2015 Jan 3. Review.

34.

Molten uranium dioxide structure and dynamics.

Skinner LB, Benmore CJ, Weber JK, Williamson MA, Tamalonis A, Hebden A, Wiencek T, Alderman OL, Guthrie M, Leibowitz L, Parise JB.

Science. 2014 Nov 21;346(6212):984-7. doi: 10.1126/science.1259709. Erratum in: Science. 2015 May 1;348(6234):aab3869.

35.

Dynamical phase transitions reveal amyloid-like states on protein folding landscapes.

Weber JK, Jack RL, Schwantes CR, Pande VS.

Biophys J. 2014 Aug 19;107(4):974-82. doi: 10.1016/j.bpj.2014.06.046.

36.

Mössbauer spectroscopy of europium-containing glasses: Optical activator study for x-ray image plates.

Johnson CE, Vu M, Johnson JA, Brown DE, Weber JK, Paßlick C, Schweizer S.

Hyperfine Interact. 2014 Apr 1;226(1-3):797-801.

37.

Low cation coordination in oxide melts.

Skinner LB, Benmore CJ, Weber JK, Du J, Neuefeind J, Tumber SK, Parise JB.

Phys Rev Lett. 2014 Apr 18;112(15):157801. Epub 2014 Apr 17.

PMID:
24785072
38.
39.

Network topology for the formation of solvated electrons in binary CaO-Al2O3 composition glasses.

Akola J, Kohara S, Ohara K, Fujiwara A, Watanabe Y, Masuno A, Usuki T, Kubo T, Nakahira A, Nitta K, Uruga T, Weber JK, Benmore CJ.

Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10129-34. doi: 10.1073/pnas.1300908110. Epub 2013 May 30.

40.

Functional understanding of solvent structure in GroEL cavity through dipole field analysis.

Weber JK, Pande VS.

J Chem Phys. 2013 Apr 28;138(16):165101. doi: 10.1063/1.4801942.

41.

Structural changes in supercooled Al2O3-Y2O3 liquids.

Wilding MC, Wilson M, Benmore CJ, Weber JK, McMillan PF.

Phys Chem Chem Phys. 2013 Jun 14;15(22):8589-605. doi: 10.1039/c3cp51209f. Epub 2013 Apr 25.

PMID:
23620162
42.

A time resolved high energy X-ray diffraction study of cooling liquid SiO2.

Skinner LB, Benmore CJ, Weber JK, Wilding MC, Tumber SK, Parise JB.

Phys Chem Chem Phys. 2013 Jun 14;15(22):8566-72. doi: 10.1039/c3cp44347g. Epub 2013 Apr 15.

PMID:
23588490
43.

Emergence of glass-like behavior in Markov state models of protein folding dynamics.

Weber JK, Jack RL, Pande VS.

J Am Chem Soc. 2013 Apr 17;135(15):5501-4. doi: 10.1021/ja4002663. Epub 2013 Apr 3.

44.

Derivation and assessment of phase-shifted, disordered vector field models for frustrated solvent interactions.

Weber JK, Pande VS.

J Chem Phys. 2013 Feb 28;138(8):085103. doi: 10.1063/1.4792638.

45.

Structural characterization and aging of glassy pharmaceuticals made using acoustic levitation.

Benmore CJ, Weber JK, Tailor AN, Cherry BR, Yarger JL, Mou Q, Weber W, Neuefeind J, Byrn SR.

J Pharm Sci. 2013 Apr;102(4):1290-300. doi: 10.1002/jps.23464. Epub 2013 Feb 4.

PMID:
23381910
46.

Structure of molten CaSiO3: neutron diffraction isotope substitution with aerodynamic levitation and molecular dynamics study.

Skinner LB, Benmore CJ, Weber JK, Tumber S, Lazareva L, Neuefeind J, Santodonato L, Du J, Parise JB.

J Phys Chem B. 2012 Nov 15;116(45):13439-47. doi: 10.1021/jp3066019. Epub 2012 Nov 6.

PMID:
23106223
47.

Structure of the floating water bridge and water in an electric field.

Skinner LB, Benmore CJ, Shyam B, Weber JK, Parise JB.

Proc Natl Acad Sci U S A. 2012 Oct 9;109(41):16463-8. doi: 10.1073/pnas.1210732109. Epub 2012 Sep 24.

48.

Protein folding is mechanistically robust.

Weber JK, Pande VS.

Biophys J. 2012 Feb 22;102(4):859-67. doi: 10.1016/j.bpj.2012.01.028. Epub 2012 Feb 21.

49.

Characterization and rapid sampling of protein folding Markov state model topologies.

Weber JK, Pande VS.

J Chem Theory Comput. 2011 Oct 11;7(10):3405-3411.

50.

The oxidation state of europium in halide glasses.

Weber JK, Vu M, Passlick C, Schweizer S, Brown DE, Johnson CE, Johnson JA.

J Phys Condens Matter. 2011 Dec 14;23(49):495402. doi: 10.1088/0953-8984/23/49/495402. Epub 2011 Nov 18.

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