Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 176

1.

Puma genomes from North and South America provide insights into the genomic consequences of inbreeding.

Saremi NF, Supple MA, Byrne A, Cahill JA, Coutinho LL, Dalén L, Figueiró HV, Johnson WE, Milne HJ, O'Brien SJ, O'Connell B, Onorato DP, Riley SPD, Sikich JA, Stahler DR, Villela PMS, Vollmers C, Wayne RK, Eizirik E, Corbett-Detig RB, Green RE, Wilmers CC, Shapiro B.

Nat Commun. 2019 Oct 18;10(1):4769. doi: 10.1038/s41467-019-12741-1.

PMID:
31628318
2.

Dog10K: an international sequencing effort to advance studies of canine domestication, phenotypes and health.

Ostrander EA, Wang GD, Larson G, vonHoldt BM, Davis BW, Jagannathan V, Hitte C, Wayne RK, Zhang YP; Dog10K Consortium .

Natl Sci Rev. 2019 Jul;6(4):810-824. doi: 10.1093/nsr/nwz049. Epub 2019 Apr 10.

3.

De novo mutation rate estimation in wolves of known pedigree.

Koch E, Schweizer RM, Schweizer TM, Stahler DR, Smith DW, Wayne RK, Novembre J.

Mol Biol Evol. 2019 Jul 12. pii: msz159. doi: 10.1093/molbev/msz159. [Epub ahead of print]

PMID:
31297530
4.

Hybridization in human evolution: Insights from other organisms.

Ackermann RR, Arnold ML, Baiz MD, Cahill JA, Cortés-Ortiz L, Evans BJ, Grant BR, Grant PR, Hallgrimsson B, Humphreys RA, Jolly CJ, Malukiewicz J, Percival CJ, Ritzman TB, Roos C, Roseman CC, Schroeder L, Smith FH, Warren KA, Wayne RK, Zinner D.

Evol Anthropol. 2019 Jul;28(4):189-209. doi: 10.1002/evan.21787. Epub 2019 Jun 20. Review.

PMID:
31222847
5.

Aquatic adaptation and depleted diversity: a deep dive into the genomes of the sea otter and giant otter.

Beichman AC, Koepfli KP, Li G, Murphy W, Dobrynin P, Kilver S, Tinker MT, Murray MJ, Johnson J, Lindblad-Toh K, Karlsson EK, Lohmueller KE, Wayne RK.

Mol Biol Evol. 2019 Jun 18. pii: msz101. doi: 10.1093/molbev/msz101. [Epub ahead of print]

PMID:
31212313
6.

Comparative genomics provides new insights into the remarkable adaptations of the African wild dog (Lycaon pictus).

Chavez DE, Gronau I, Hains T, Kliver S, Koepfli KP, Wayne RK.

Sci Rep. 2019 Jun 6;9(1):8329. doi: 10.1038/s41598-019-44772-5.

7.

Genomic signatures of extensive inbreeding in Isle Royale wolves, a population on the threshold of extinction.

Robinson JA, Räikkönen J, Vucetich LM, Vucetich JA, Peterson RO, Lohmueller KE, Wayne RK.

Sci Adv. 2019 May 29;5(5):eaau0757. doi: 10.1126/sciadv.aau0757. eCollection 2019 May.

8.

Complex patterns of sex-biased demography in canines.

Phung TN, Wayne RK, Wilson MA, Lohmueller KE.

Proc Biol Sci. 2019 May 29;286(1903):20181976. doi: 10.1098/rspb.2018.1976.

PMID:
31113325
9.

Gene expression shifts in yellow-bellied marmots prior to natal dispersal.

Armenta TC, Cole SW, Geschwind DH, Blumstein DT, Wayne RK.

Behav Ecol. 2019 Mar-Apr;30(2):267-277. doi: 10.1093/beheco/ary175. Epub 2018 Dec 17.

PMID:
30971856
10.

Widespread anticoagulant poison exposure in predators in a rapidly growing South African city.

Serieys LEK, Bishop J, Okes N, Broadfield J, Winterton DJ, Poppenga RH, Viljoen S, Wayne RK, O'Riain MJ.

Sci Total Environ. 2019 May 20;666:581-590. doi: 10.1016/j.scitotenv.2019.02.122. Epub 2019 Feb 13.

PMID:
30807948
11.

Phylogeographic and diversification patterns of the white-nosed coati (Nasua narica): Evidence for south-to-north colonization of North America.

Nigenda-Morales SF, Gompper ME, Valenzuela-Galván D, Lay AR, Kapheim KM, Hass C, Booth-Binczik SD, Binczik GA, Hirsch BT, McColgin M, Koprowski JL, McFadden K, Wayne RK, Koepfli KP.

Mol Phylogenet Evol. 2019 Feb;131:149-163. doi: 10.1016/j.ympev.2018.11.011. Epub 2018 Nov 20.

PMID:
30468940
12.

Purging of Strongly Deleterious Mutations Explains Long-Term Persistence and Absence of Inbreeding Depression in Island Foxes.

Robinson JA, Brown C, Kim BY, Lohmueller KE, Wayne RK.

Curr Biol. 2018 Nov 5;28(21):3487-3494.e4. doi: 10.1016/j.cub.2018.08.066. Epub 2018 Oct 25.

PMID:
30415705
13.

Natural re-colonization and admixture of wolves (Canis lupus) in the US Pacific Northwest: challenges for the protection and management of rare and endangered taxa.

Hendricks SA, Schweizer RM, Harrigan RJ, Pollinger JP, Paquet PC, Darimont CT, Adams JR, Waits LP, vonHoldt BM, Hohenlohe PA, Wayne RK.

Heredity (Edinb). 2019 Feb;122(2):133-149. doi: 10.1038/s41437-018-0094-x. Epub 2018 Jun 7.

PMID:
29880893
14.

Widespread, long-term admixture between grey wolves and domestic dogs across Eurasia and its implications for the conservation status of hybrids.

Pilot M, Greco C, vonHoldt BM, Randi E, Jędrzejewski W, Sidorovich VE, Konopiński MK, Ostrander EA, Wayne RK.

Evol Appl. 2018 Mar 8;11(5):662-680. doi: 10.1111/eva.12595. eCollection 2018 Jun.

15.

Transcriptomic analysis of skin pigmentation variation in the Virginia opossum (Didelphis virginiana).

Nigenda-Morales SF, Hu Y, Beasley JC, Ruiz-Piña HA, Valenzuela-Galván D, Wayne RK.

Mol Ecol. 2018 Jun;27(12):2680-2697. doi: 10.1111/mec.14712. Epub 2018 Jun 4.

PMID:
29742302
16.

Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves.

Schweizer RM, Durvasula A, Smith J, Vohr SH, Stahler DR, Galaverni M, Thalmann O, Smith DW, Randi E, Ostrander EA, Green RE, Lohmueller KE, Novembre J, Wayne RK.

Mol Biol Evol. 2018 May 1;35(5):1190-1209. doi: 10.1093/molbev/msy031.

17.

Playing by the rules? Phenotypic adaptation to temperate environments in an American marsupial.

Nigenda-Morales SF, Harrigan RJ, Wayne RK.

PeerJ. 2018 Mar 27;6:e4512. doi: 10.7717/peerj.4512. eCollection 2018.

18.

Urbanization and anticoagulant poisons promote immune dysfunction in bobcats.

Serieys LEK, Lea AJ, Epeldegui M, Armenta TC, Moriarty J, VandeWoude S, Carver S, Foley J, Wayne RK, Riley SPD, Uittenbogaart CH.

Proc Biol Sci. 2018 Jan 31;285(1871). pii: 20172533. doi: 10.1098/rspb.2017.2533.

19.

Demographic history, selection and functional diversity of the canine genome.

Ostrander EA, Wayne RK, Freedman AH, Davis BW.

Nat Rev Genet. 2017 Dec;18(12):705-720. doi: 10.1038/nrg.2017.67. Epub 2017 Sep 25. Review.

PMID:
28944780
20.

EPAS1 variants in high altitude Tibetan wolves were selectively introgressed into highland dogs.

vonHoldt B, Fan Z, Ortega-Del Vecchyo D, Wayne RK.

PeerJ. 2017 Jul 12;5:e3522. doi: 10.7717/peerj.3522. eCollection 2017.

21.

Determining the drivers of population structure in a highly urbanized landscape to inform conservation planning.

Thomassen HA, Harrigan RJ, Semple Delaney K, Riley SPD, Serieys LEK, Pease K, Wayne RK, Smith TB.

Conserv Biol. 2018 Feb;32(1):148-158. doi: 10.1111/cobi.12969. Epub 2017 Oct 30.

PMID:
28631859
22.

Response to Hohenlohe et al.

vonHoldt BM, Cahill JA, Gronau I, Shapiro B, Wall J, Wayne RK.

Sci Adv. 2017 Jun 7;3(6):e1701233. doi: 10.1126/sciadv.1701233. eCollection 2017 Jun.

23.

Deciphering the Origin of Dogs: From Fossils to Genomes.

Freedman AH, Wayne RK.

Annu Rev Anim Biosci. 2017 Feb 8;5:281-307. doi: 10.1146/annurev-animal-022114-110937. Epub 2016 Nov 28. Review.

PMID:
27912242
24.

Seasonal gene expression in a migratory songbird.

Johnston RA, Paxton KL, Moore FR, Wayne RK, Smith TB.

Mol Ecol. 2016 Nov;25(22):5680-5691. doi: 10.1111/mec.13879. Epub 2016 Nov 1.

PMID:
27747949
25.

Molecular assessment of the phylogeny and biogeography of a recently diversified endemic group of South American canids (Mammalia: Carnivora: Canidae).

Tchaicka L, Freitas TR, Bager A, Vidal SL, Lucherini M, Iriarte A, Novaro A, Geffen E, Garcez FS, Johnson WE, Wayne RK, Eizirik E.

Genet Mol Biol. 2016 Jul-Sep;39(3):442-51. doi: 10.1590/1678-4685-GMB-2015-0189. Epub 2016 Jul 25.

26.

Whole-genome sequence analysis shows that two endemic species of North American wolf are admixtures of the coyote and gray wolf.

vonHoldt BM, Cahill JA, Fan Z, Gronau I, Robinson J, Pollinger JP, Shapiro B, Wall J, Wayne RK.

Sci Adv. 2016 Jul 27;2(7):e1501714. doi: 10.1126/sciadv.1501714. eCollection 2016 Jul.

27.

Pervasive Effects of Aging on Gene Expression in Wild Wolves.

Charruau P, Johnston RA, Stahler DR, Lea A, Snyder-Mackler N, Smith DW, vonHoldt BM, Cole SW, Tung J, Wayne RK.

Mol Biol Evol. 2016 Aug;33(8):1967-78. doi: 10.1093/molbev/msw072. Epub 2016 Apr 15.

28.

The concerted impact of domestication and transposon insertions on methylation patterns between dogs and grey wolves.

Janowitz Koch I, Clark MM, Thompson MJ, Deere-Machemer KA, Wang J, Duarte L, Gnanadesikan GE, McCoy EL, Rubbi L, Stahler DR, Pellegrini M, Ostrander EA, Wayne RK, Sinsheimer JS, vonHoldt BM.

Mol Ecol. 2016 Apr;25(8):1838-55. doi: 10.1111/mec.13480. Epub 2016 Jan 18.

29.

Genomic Flatlining in the Endangered Island Fox.

Robinson JA, Ortega-Del Vecchyo D, Fan Z, Kim BY, vonHoldt BM, Marsden CD, Lohmueller KE, Wayne RK.

Curr Biol. 2016 May 9;26(9):1183-9. doi: 10.1016/j.cub.2016.02.062. Epub 2016 Apr 21.

30.

Admixture mapping identifies introgressed genomic regions in North American canids.

vonHoldt BM, Kays R, Pollinger JP, Wayne RK.

Mol Ecol. 2016 Jun;25(11):2443-53. doi: 10.1111/mec.13667. Epub 2016 May 12.

PMID:
27106273
31.

Hybridization and endangered species protection in the molecular era.

Wayne RK, Shaffer HB.

Mol Ecol. 2016 Jun;25(11):2680-9. doi: 10.1111/mec.13642. Epub 2016 May 11.

PMID:
27064931
32.

Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs.

Freedman AH, Schweizer RM, Ortega-Del Vecchyo D, Han E, Davis BW, Gronau I, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Ramirez O, Hormozdiari F, Alkan C, Vilà C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Marques-Bonet T, Ostrander EA, Wayne RK, Novembre J.

PLoS Genet. 2016 Mar 4;12(3):e1005851. doi: 10.1371/journal.pgen.1005851. eCollection 2016 Mar.

33.

Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs.

Marsden CD, Ortega-Del Vecchyo D, O'Brien DP, Taylor JF, Ramirez O, Vilà C, Marques-Bonet T, Schnabel RD, Wayne RK, Lohmueller KE.

Proc Natl Acad Sci U S A. 2016 Jan 5;113(1):152-7. doi: 10.1073/pnas.1512501113. Epub 2015 Dec 22.

34.

Worldwide patterns of genomic variation and admixture in gray wolves.

Fan Z, Silva P, Gronau I, Wang S, Armero AS, Schweizer RM, Ramirez O, Pollinger J, Galaverni M, Ortega Del-Vecchyo D, Du L, Zhang W, Zhang Z, Xing J, Vilà C, Marques-Bonet T, Godinho R, Yue B, Wayne RK.

Genome Res. 2016 Feb;26(2):163-73. doi: 10.1101/gr.197517.115. Epub 2015 Dec 17.

35.

Targeted capture and resequencing of 1040 genes reveal environmentally driven functional variation in grey wolves.

Schweizer RM, Robinson J, Harrigan R, Silva P, Galverni M, Musiani M, Green RE, Novembre J, Wayne RK.

Mol Ecol. 2016 Jan;25(1):357-79. doi: 10.1111/mec.13467. Epub 2015 Dec 24.

PMID:
26562361
36.

Genetic subdivision and candidate genes under selection in North American grey wolves.

Schweizer RM, vonHoldt BM, Harrigan R, Knowles JC, Musiani M, Coltman D, Novembre J, Wayne RK.

Mol Ecol. 2016 Jan;25(1):380-402. doi: 10.1111/mec.13364. Epub 2015 Nov 5.

PMID:
26333947
37.

Genome-wide Evidence Reveals that African and Eurasian Golden Jackals Are Distinct Species.

Koepfli KP, Pollinger J, Godinho R, Robinson J, Lea A, Hendricks S, Schweizer RM, Thalmann O, Silva P, Fan Z, Yurchenko AA, Dobrynin P, Makunin A, Cahill JA, Shapiro B, Álvares F, Brito JC, Geffen E, Leonard JA, Helgen KM, Johnson WE, O'Brien SJ, Van Valkenburgh B, Wayne RK.

Curr Biol. 2015 Aug 17;25(16):2158-65. doi: 10.1016/j.cub.2015.06.060. Epub 2015 Jul 30.

38.

Comparison against 186 canid whole-genome sequences reveals survival strategies of an ancient clonally transmissible canine tumor.

Decker B, Davis BW, Rimbault M, Long AH, Karlins E, Jagannathan V, Reiman R, Parker HG, Drögemüller C, Corneveaux JJ, Chapman ES, Trent JM, Leeb T, Huentelman MJ, Wayne RK, Karyadi DM, Ostrander EA.

Genome Res. 2015 Nov;25(11):1646-55. doi: 10.1101/gr.190314.115. Epub 2015 Jul 31.

39.

Mexican Wolves Are a Valid Subspecies and an Appropriate Conservation Target.

Fredrickson RJ, Hedrick PW, Wayne RK, vonHoldt BM, Phillips MK.

J Hered. 2015 Jul-Aug;106(4):415-6. doi: 10.1093/jhered/esv028. Epub 2015 May 11. No abstract available.

PMID:
25964445
40.

Anticoagulant rodenticides in urban bobcats: exposure, risk factors and potential effects based on a 16-year study.

Serieys LE, Armenta TC, Moriarty JG, Boydston EE, Lyren LM, Poppenga RH, Crooks KR, Wayne RK, Riley SP.

Ecotoxicology. 2015 May;24(4):844-62. doi: 10.1007/s10646-015-1429-5. Epub 2015 Feb 25.

PMID:
25707484
41.

Kinship, parental manipulation and evolutionary origins of eusociality.

Kapheim KM, Nonacs P, Smith AR, Wayne RK, Wcislo WT.

Proc Biol Sci. 2015 Mar 22;282(1803):20142886. doi: 10.1098/rspb.2014.2886.

42.

Disease and freeways drive genetic change in urban bobcat populations.

Serieys LE, Lea A, Pollinger JP, Riley SP, Wayne RK.

Evol Appl. 2015 Jan;8(1):75-92. doi: 10.1111/eva.12226. Epub 2014 Dec 2.

43.

Individual behaviors dominate the dynamics of an urban mountain lion population isolated by roads.

Riley SP, Serieys LE, Pollinger JP, Sikich JA, Dalbeck L, Wayne RK, Ernest HB.

Curr Biol. 2014 Sep 8;24(17):1989-94. doi: 10.1016/j.cub.2014.07.029. Epub 2014 Aug 14.

44.

Hypoxia adaptations in the grey wolf (Canis lupus chanco) from Qinghai-Tibet Plateau.

Zhang W, Fan Z, Han E, Hou R, Zhang L, Galaverni M, Huang J, Liu H, Silva P, Li P, Pollinger JP, Du L, Zhang X, Yue B, Wayne RK, Zhang Z.

PLoS Genet. 2014 Jul 31;10(7):e1004466. doi: 10.1371/journal.pgen.1004466. eCollection 2014 Jul.

45.

Analysis of structural diversity in wolf-like canids reveals post-domestication variants.

Ramirez O, Olalde I, Berglund J, Lorente-Galdos B, Hernandez-Rodriguez J, Quilez J, Webster MT, Wayne RK, Lalueza-Fox C, Vilà C, Marques-Bonet T.

BMC Genomics. 2014 Jun 12;15:465. doi: 10.1186/1471-2164-15-465.

46.

Genome sequencing highlights the dynamic early history of dogs.

Freedman AH, Gronau I, Schweizer RM, Ortega-Del Vecchyo D, Han E, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Beale H, Ramirez O, Hormozdiari F, Alkan C, Vilà C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Wilton A, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Ostrander EA, Marques-Bonet T, Wayne RK, Novembre J.

PLoS Genet. 2014 Jan;10(1):e1004016. doi: 10.1371/journal.pgen.1004016. Epub 2014 Jan 16. Erratum in: PLoS Genet. 2014 Aug;10(8):e1004631. Wilton, Alan [added].

47.

Renewed diversification is associated with new ecological opportunity in the Neotropical turtle ants.

Price SL, Powell S, Kronauer DJ, Tran LA, Pierce NE, Wayne RK.

J Evol Biol. 2014 Feb;27(2):242-58. doi: 10.1111/jeb.12300. Epub 2014 Jan 13.

48.

Genome-wide signatures of population bottlenecks and diversifying selection in European wolves.

Pilot M, Greco C, vonHoldt BM, Jędrzejewska B, Randi E, Jędrzejewski W, Sidorovich VE, Ostrander EA, Wayne RK.

Heredity (Edinb). 2014 Apr;112(4):428-42. doi: 10.1038/hdy.2013.122. Epub 2013 Dec 18.

49.

Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs.

Thalmann O, Shapiro B, Cui P, Schuenemann VJ, Sawyer SK, Greenfield DL, Germonpré MB, Sablin MV, López-Giráldez F, Domingo-Roura X, Napierala H, Uerpmann HP, Loponte DM, Acosta AA, Giemsch L, Schmitz RW, Worthington B, Buikstra JE, Druzhkova A, Graphodatsky AS, Ovodov ND, Wahlberg N, Freedman AH, Schweizer RM, Koepfli KP, Leonard JA, Meyer M, Krause J, Pääbo S, Green RE, Wayne RK.

Science. 2013 Nov 15;342(6160):871-4. doi: 10.1126/science.1243650.

50.

Derived variants at six genes explain nearly half of size reduction in dog breeds.

Rimbault M, Beale HC, Schoenebeck JJ, Hoopes BC, Allen JJ, Kilroy-Glynn P, Wayne RK, Sutter NB, Ostrander EA.

Genome Res. 2013 Dec;23(12):1985-95. doi: 10.1101/gr.157339.113. Epub 2013 Sep 11.

Supplemental Content

Loading ...
Support Center