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Items: 1 to 50 of 91

1.

Global Satellite Retrievals of the Near-Surface Atmospheric Vapor Pressure Deficit from AMSR-E and AMSR2.

Du J, Kimball JS, Reichle RH, Jones LA, Watts JD, Kim Y.

Remote Sens (Basel). 2018;10(8). pii: 1175. doi: 10.3390/rs10081175. Epub 2018 Jun 25.

PMID:
30505569
2.

Assessing global surface water inundation dynamics using combined satellite information from SMAP, AMSR2 and Landsat.

DU J, Kimball JS, Galantowicz J, Kim SB, Chan SK, Reichle R, Jones LA, Watts JD.

Remote Sens Environ. 2018 Aug;213:1-17. doi: 10.1016/j.rse.2018.04.054. Epub 2018 May 11.

PMID:
30050230
3.

Cold season emissions dominate the Arctic tundra methane budget.

Zona D, Gioli B, Commane R, Lindaas J, Wofsy SC, Miller CE, Dinardo SJ, Dengel S, Sweeney C, Karion A, Chang RY, Henderson JM, Murphy PC, Goodrich JP, Moreaux V, Liljedahl A, Watts JD, Kimball JS, Lipson DA, Oechel WC.

Proc Natl Acad Sci U S A. 2016 Jan 5;113(1):40-5. doi: 10.1073/pnas.1516017113. Epub 2015 Dec 22.

4.

Metal Oxide Nanomaterials in Nanomedicine: Applications in Photodynamic Therapy and Potential Toxicity.

He X, Aker WG, Huang MJ, Watts JD, Hwang HM.

Curr Top Med Chem. 2015;15(18):1887-900. Review.

PMID:
25961519
5.

Quantitative proteogenomic profiling of epidermal barrier formation in vitro.

Winget JM, Watts JD, Hoopmann MR, DiColandrea T, Robinson MK, Huggins T, Bascom CC, Isfort RJ, Moritz RL.

J Dermatol Sci. 2015 Jun;78(3):173-80. doi: 10.1016/j.jdermsci.2015.02.013. Epub 2015 Mar 14.

6.

Using experimental data of Escherichia coli to develop a QSAR model for predicting the photo-induced cytotoxicity of metal oxide nanoparticles.

Pathakoti K, Huang MJ, Watts JD, He X, Hwang HM.

J Photochem Photobiol B. 2014 Jan 5;130:234-40. doi: 10.1016/j.jphotobiol.2013.11.023. Epub 2013 Dec 4.

PMID:
24362319
7.

State of the human proteome in 2013 as viewed through PeptideAtlas: comparing the kidney, urine, and plasma proteomes for the biology- and disease-driven Human Proteome Project.

Farrah T, Deutsch EW, Omenn GS, Sun Z, Watts JD, Yamamoto T, Shteynberg D, Harris MM, Moritz RL.

J Proteome Res. 2014 Jan 3;13(1):60-75. doi: 10.1021/pr4010037. Epub 2013 Dec 6.

8.

Self-assembled ErSb nanostructures with optical applications in infrared and terahertz.

Lu H, Ouellette DG, Preu S, Watts JD, Zaks B, Burke PG, Sherwin MS, Gossard AC.

Nano Lett. 2014 Mar 12;14(3):1107-12. doi: 10.1021/nl402436g. Epub 2013 Nov 14.

PMID:
24206535
9.

Binding of O2 and NO to heme in heme-nitric oxide/oxygen-binding (H-NOX) proteins. A theoretical study.

Liao MS, Huang MJ, Watts JD.

J Phys Chem B. 2013 Sep 5;117(35):10103-14. doi: 10.1021/jp403998u. Epub 2013 Aug 22.

10.

Effects of local protein environment on the binding of diatomic molecules to heme in myoglobins. DFT and dispersion-corrected DFT studies.

Liao MS, Huang MJ, Watts JD.

J Mol Model. 2013 Aug;19(8):3307-23. doi: 10.1007/s00894-013-1864-2. Epub 2013 May 10.

11.

Factors that distort the heme structure in Heme-Nitric Oxide/OXygen-Binding (H-NOX) protein domains. A theoretical study.

Liao MS, Huang MJ, Watts JD.

J Inorg Biochem. 2013 Jan;118:28-38. doi: 10.1016/j.jinorgbio.2012.09.011. Epub 2012 Sep 16.

12.

An assessment of current bioinformatic solutions for analyzing LC-MS data acquired by selected reaction monitoring technology.

Brusniak MY, Chu CS, Kusebauch U, Sartain MJ, Watts JD, Moritz RL.

Proteomics. 2012 Apr;12(8):1176-84. doi: 10.1002/pmic.201100571. Review.

13.

Theoretical study of triatomic silver (Ag3) and its ions with coupled-cluster methods and correlation-consistent basis sets.

Huang MJ, Watts JD.

Phys Chem Chem Phys. 2012 May 21;14(19):6849-55. doi: 10.1039/c2cp23744j. Epub 2012 Apr 4.

PMID:
22476081
15.

Theoretical investigation into the structural, thermochemical, and electronic properties of the decathio[10]circulene.

Napolion B, Hagelberg F, Huang MJ, Watts JD, Simeon TM, Vereen D, Walters WL, Williams QL.

J Phys Chem A. 2011 Aug 11;115(31):8682-90. doi: 10.1021/jp1122773. Epub 2011 Jul 19.

PMID:
21707074
16.

Understanding and integrating local perceptions of trees and forests into incentives for sustainable landscape management.

Pfund JL, Watts JD, Boissière M, Boucard A, Bullock RM, Ekadinata A, Dewi S, Feintrenie L, Levang P, Rantala S, Sheil D, Sunderland T, Urech ZL.

Environ Manage. 2011 Aug;48(2):334-49. doi: 10.1007/s00267-011-9689-1. Epub 2011 Jun 5. Erratum in: Environ Manage. 2011 Aug;48(2):350. Sunderland, Terence Clarence Heethom [corrected to Sunderland, Terry].

17.

A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas.

Farrah T, Deutsch EW, Omenn GS, Campbell DS, Sun Z, Bletz JA, Mallick P, Katz JE, Malmström J, Ossola R, Watts JD, Lin B, Zhang H, Moritz RL, Aebersold R.

Mol Cell Proteomics. 2011 Sep;10(9):M110.006353. doi: 10.1074/mcp.M110.006353. Epub 2011 Jun 1.

18.

Structure, bonding, and linear optical properties of a series of silver and gold nanorod clusters: DFT/TDDFT studies.

Liao MS, Bonifassi P, Leszczynski J, Ray PC, Huang MJ, Watts JD.

J Phys Chem A. 2010 Dec 9;114(48):12701-8. doi: 10.1021/jp105354n. Epub 2010 Nov 9.

PMID:
21062075
19.

Theoretical characterization of the F(2)O(3) molecule by coupled-cluster methods.

Huang MJ, Watts JD.

J Phys Chem A. 2010 Sep 23;114(37):10197-201. doi: 10.1021/jp101106n.

PMID:
20722435
20.

Iron porphyrins with different imidazole ligands. A theoretical comparative study.

Liao MS, Huang MJ, Watts JD.

J Phys Chem A. 2010 Sep 9;114(35):9554-69. doi: 10.1021/jp1052216.

21.

Supramolecular interactions of fullerenes with (Cl)Fe- and Mn porphyrins. A theoretical study.

Liao MS, Watts JD, Huang MJ.

Phys Chem Chem Phys. 2009 Aug 7;11(29):6072-81. doi: 10.1039/b904782d. Epub 2009 May 18.

PMID:
19606316
22.

Dispersion-corrected DFT calculations on C(60)-porphyrin complexes.

Liao MS, Watts JD, Huang MJ.

Phys Chem Chem Phys. 2009 Jun 7;11(21):4365-74. doi: 10.1039/b820667h. Epub 2009 Mar 26.

PMID:
19458840
23.

Halogenated peptides as internal standards (H-PINS): introduction of an MS-based internal standard set for liquid chromatography-mass spectrometry.

Mirzaei H, Brusniak MY, Mueller LN, Letarte S, Watts JD, Aebersold R.

Mol Cell Proteomics. 2009 Aug;8(8):1934-46. doi: 10.1074/mcp.M800569-MCP200. Epub 2009 May 1.

24.

Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.

Wollscheid B, Bausch-Fluck D, Henderson C, O'Brien R, Bibel M, Schiess R, Aebersold R, Watts JD.

Nat Biotechnol. 2009 Apr;27(4):378-86. doi: 10.1038/nbt.1532. Epub 2009 Apr 6. Erratum in: Nat Biotechnol. 2009 Sep;27(9):864.

25.
26.

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.

Brusniak MY, Bodenmiller B, Campbell D, Cooke K, Eddes J, Garbutt A, Lau H, Letarte S, Mueller LN, Sharma V, Vitek O, Zhang N, Aebersold R, Watts JD.

BMC Bioinformatics. 2008 Dec 16;9:542. doi: 10.1186/1471-2105-9-542.

27.

Differential Plasma Glycoproteome of p19 Skin Cancer Mouse Model Using the Corra Label-Free LC-MS Proteomics Platform.

Letarte S, Brusniak MY, Campbell D, Eddes J, Kemp CJ, Lau H, Mueller L, Schmidt A, Shannon P, Kelly-Spratt KS, Vitek O, Zhang H, Aebersold R, Watts JD.

Clin Proteomics. 2008 Dec 1;4(3-4):105.

28.

Coupled-cluster study of isomers of H2SO2.

Napolion B, Huang MJ, Watts JD.

J Phys Chem A. 2008 May 1;112(17):4158-64. doi: 10.1021/jp8009047. Epub 2008 Apr 10.

PMID:
18399676
29.

Role of local immunoglobulin E specific for Alternaria alternata in the pathogenesis of nasal polyposis.

Sabirov A, Hamilton RG, Jacobs JB, Hillman DE, Lebowitz RA, Watts JD.

Laryngoscope. 2008 Jan;118(1):4-9.

PMID:
17989579
30.

Effects of pH and mixing agents on the temporal setting of tooth-colored and gray mineral trioxide aggregate.

Watts JD, Holt DM, Beeson TJ, Kirkpatrick TC, Rutledge RE.

J Endod. 2007 Aug;33(8):970-3. Epub 2007 May 23.

PMID:
17878085
31.
32.

Electronic structure of some substituted iron(II) porphyrins. Are they intermediate or high spin?

Liao MS, Watts JD, Huang MJ.

J Phys Chem A. 2007 Jul 5;111(26):5927-35. Epub 2007 Jun 9.

PMID:
17559200
33.

Interaction of metal porphyrins with fullerene C60: a new insight.

Liao MS, Watts JD, Huang MJ.

J Phys Chem B. 2007 May 3;111(17):4374-82. Epub 2007 Apr 7.

PMID:
17417891
34.

DFT/TDDFT study of lanthanide(III) mono- and bisporphyrin complexes.

Liao MS, Watts JD, Huang MJ.

J Phys Chem A. 2006 Dec 7;110(48):13089-98.

35.

Mass spectrometric detection of tissue proteins in plasma.

Zhang H, Liu AY, Loriaux P, Wollscheid B, Zhou Y, Watts JD, Aebersold R.

Mol Cell Proteomics. 2007 Jan;6(1):64-71. Epub 2006 Oct 9.

36.

Ground and electronically excited states of methyl hydroperoxide: comparison with hydrogen peroxide.

Watts JD, Francisco JS.

J Chem Phys. 2006 Sep 14;125(10):104301.

PMID:
16999520
37.

A proteomic (SELDI-TOF-MS) approach to estrogen agonist screening.

Walker CC, Salinas KA, Harris PS, Wilkinson SS, Watts JD, Hemmer MJ.

Toxicol Sci. 2007 Jan;95(1):74-81. Epub 2006 Aug 17.

PMID:
16917070
38.
39.

Fe(II) in different macrocycles: electronic structures and properties.

Liao MS, Watts JD, Huang MJ.

J Phys Chem A. 2005 Sep 8;109(35):7988-8000.

PMID:
16834181
40.

Quantitative proteomic analysis of B cell lipid rafts reveals that ezrin regulates antigen receptor-mediated lipid raft dynamics.

Gupta N, Wollscheid B, Watts JD, Scheer B, Aebersold R, DeFranco AL.

Nat Immunol. 2006 Jun;7(6):625-33. Epub 2006 Apr 30.

PMID:
16648854
41.

Effects of peripheral substituents and axial ligands on the electronic structure and properties of cobalt porphyrins.

Liao MS, Watts JD, Huang MJ.

J Phys Chem A. 2005 Dec 29;109(51):11996-2005.

PMID:
16366654
42.

Effects of Peripheral Substituents on the Electronic Structure and Properties of Unligated and Ligated Metal Phthalocyanines, Metal = Fe, Co, Zn.

Liao MS, Watts JD, Huang MJ, Gorun SM, Kar T, Scheiner S.

J Chem Theory Comput. 2005 Nov;1(6):1201-10. doi: 10.1021/ct050105y.

PMID:
26631664
43.
44.

Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry.

Tao WA, Wollscheid B, O'Brien R, Eng JK, Li XJ, Bodenmiller B, Watts JD, Hood L, Aebersold R.

Nat Methods. 2005 Aug;2(8):591-8.

PMID:
16094384
45.

DFT study of unligated and ligated manganese(II) porphyrins and phthalocyanines.

Liao MS, Watts JD, Huang MJ.

Inorg Chem. 2005 Mar 21;44(6):1941-9.

PMID:
15762720
46.

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry.

Desiere F, Deutsch EW, Nesvizhskii AI, Mallick P, King NL, Eng JK, Aderem A, Boyle R, Brunner E, Donohoe S, Fausto N, Hafen E, Hood L, Katze MG, Kennedy KA, Kregenow F, Lee H, Lin B, Martin D, Ranish JA, Rawlings DJ, Samelson LE, Shiio Y, Watts JD, Wollscheid B, Wright ME, Yan W, Yang L, Yi EC, Zhang H, Aebersold R.

Genome Biol. 2005;6(1):R9. Epub 2004 Dec 10.

47.

Lipid raft proteins and their identification in T lymphocytes.

Wollscheid B, von Haller PD, Yi E, Donohoe S, Vaughn K, Keller A, Nesvizhskii AI, Eng J, Li XJ, Goodlett DR, Aebersold R, Watts JD.

Subcell Biochem. 2004;37:121-52. Review.

PMID:
15376619
48.

Proteomics/genomics and signaling in lymphocytes.

Wollscheid B, Watts JD, Aebersold R.

Curr Opin Immunol. 2004 Jun;16(3):337-44. Review.

PMID:
15134783
49.

PTPH1 is a predominant protein-tyrosine phosphatase capable of interacting with and dephosphorylating the T cell receptor zeta subunit.

Sozio MS, Mathis MA, Young JA, Wälchli S, Pitcher LA, Wrage PC, Bartók B, Campbell A, Watts JD, Aebersold R, Hooft van Huijsduijnen R, van Oers NS.

J Biol Chem. 2004 Feb 27;279(9):7760-9. Epub 2003 Dec 12.

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