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Items: 1 to 50 of 307

1.

The use of site-specific suppressors to measure the relative contributions of different mitochondrial sites to skeletal muscle superoxide and hydrogen peroxide production.

Goncalves RLS, Watson MA, Wong HS, Orr AL, Brand MD.

Redox Biol. 2020 Jan;28:101341. doi: 10.1016/j.redox.2019.101341. Epub 2019 Oct 9.

2.

Toward Improving Practices for Submission of Diagnostic Tissue Blocks for National Cancer Institute Clinical Trials.

Makhlouf H, Watson MA, Lankes HA, Weil C, Dickler M, Birrer M, Moskaluk C, Ramirez NC, Okby N, Alonsozana E, Barnes M, Goldman EB, Enos R, Lubensky I.

Am J Clin Pathol. 2019 Oct 15. pii: aqz141. doi: 10.1093/ajcp/aqz141. [Epub ahead of print]

PMID:
31613330
3.

Use of S1QELs and S3QELs to link mitochondrial sites of superoxide and hydrogen peroxide generation to physiological and pathological outcomes.

Watson MA, Wong HS, Brand MD.

Biochem Soc Trans. 2019 Oct 31;47(5):1461-1469. doi: 10.1042/BST20190305.

PMID:
31506330
4.

Gene expression analysis to detect disseminated tumor cells in the bone marrow of triple-negative breast cancer patients predicts metastatic relapse.

Siddappa CM, Pillai SG, Snider J, Alldredge P, Trinkaus K, Watson MA, Aft R.

Breast Cancer Res Treat. 2019 Nov;178(2):317-325. doi: 10.1007/s10549-019-05405-7. Epub 2019 Aug 20.

5.

A conserved role of the insulin-like signaling pathway in diet-dependent uric acid pathologies in Drosophila melanogaster.

Lang S, Hilsabeck TA, Wilson KA, Sharma A, Bose N, Brackman DJ, Beck JN, Chen L, Watson MA, Killilea DW, Ho S, Kahn A, Giacomini K, Stoller ML, Chi T, Kapahi P.

PLoS Genet. 2019 Aug 15;15(8):e1008318. doi: 10.1371/journal.pgen.1008318. eCollection 2019 Aug.

6.

Generation of Tautomers Using Micro-p Ka's.

Watson MA, Yu HS, Bochevarov AD.

J Chem Inf Model. 2019 Jun 24;59(6):2672-2689. doi: 10.1021/acs.jcim.8b00955. Epub 2019 Jun 4.

PMID:
31070917
7.

Properties of bone from Catfish heads and frames.

Bechtel PJ, Watson MA, Lea JM, Bett-Garber KL, Bland JM.

Food Sci Nutr. 2019 Mar 2;7(4):1396-1405. doi: 10.1002/fsn3.974. eCollection 2019 Apr.

8.

Association of Race and Poverty With Mortality Among Nursing Home Residents on Maintenance Dialysis.

Nee R, Thurlow JS, Norris KC, Yuan C, Watson MA, Agodoa LY, Abbott KC.

J Am Med Dir Assoc. 2019 Jul;20(7):904-910. doi: 10.1016/j.jamda.2019.02.013. Epub 2019 Mar 28.

PMID:
30929962
9.

Bacteriophages Against Pathogenic Vibrios in Delaware Bay Oysters (Crassostrea virginica) During a Period of High Levels of Pathogenic Vibrio parahaemolyticus.

Richards GP, Chintapenta LK, Watson MA, Abbott AG, Ozbay G, Uknalis J, Oyelade AA, Parveen S.

Food Environ Virol. 2019 Jun;11(2):101-112. doi: 10.1007/s12560-019-09365-5. Epub 2019 Jan 31.

PMID:
30706411
10.

Arsenic adsorption on Fe-Mn modified granular activated carbon (GAC-FeMn): batch and fixed-bed column studies.

Nikić J, Agbaba J, Watson MA, Tubić A, Šolić M, Maletić S, Dalmacija B.

J Environ Sci Health A Tox Hazard Subst Environ Eng. 2019;54(3):168-178. doi: 10.1080/10934529.2018.1541375. Epub 2019 Jan 26.

PMID:
30688160
11.

Whole-Genome Sequences of Two Pseudoalteromonas piscicida Strains, DE1-A and DE2-A, with Strong Antibacterial Activity against Vibrio vulnificus.

Richards GP, Needleman DS, Watson MA, Polson SW.

Microbiol Resour Announc. 2019 Jan 3;8(1). pii: e01451-18. doi: 10.1128/MRA.01451-18. eCollection 2019 Jan.

12.

Complete Genome Sequence of Vibrio coralliilyticus RE22, a Marine Bacterium Pathogenic toward Larval Shellfish.

Richards GP, Kingham BF, Shevchenko O, Watson MA, Needleman DS.

Microbiol Resour Announc. 2018 Nov 1;7(17). pii: e01332-18. doi: 10.1128/MRA.01332-18. eCollection 2018 Nov.

13.

Correlation of PD-L1 Expression with Tumor Mutation Burden and Gene Signatures for Prognosis in Early-Stage Squamous Cell Lung Carcinoma.

Yu H, Chen Z, Ballman KV, Watson MA, Govindan R, Lanc I, Beer DG, Bueno R, Chirieac LR, Chui MH, Chen G, Franklin WA, Gandara DR, Genova C, Brovsky KA, Joshi MM, Merrick DT, Richards WG, Rivard CJ, Harpole DH, Tsao MS, van Bokhoven A, Shepherd FA, Hirsch FR.

J Thorac Oncol. 2019 Jan;14(1):25-36. doi: 10.1016/j.jtho.2018.09.006. Epub 2018 Sep 22.

PMID:
30253973
14.

Recurrent WNT pathway alterations are frequent in relapsed small cell lung cancer.

Wagner AH, Devarakonda S, Skidmore ZL, Krysiak K, Ramu A, Trani L, Kunisaki J, Masood A, Waqar SN, Spies NC, Morgensztern D, Waligorski J, Ponce J, Fulton RS, Maggi LB Jr, Weber JD, Watson MA, O'Conor CJ, Ritter JH, Olsen RR, Cheng H, Mukhopadhyay A, Can I, Cessna MH, Oliver TG, Mardis ER, Wilson RK, Griffith M, Griffith OL, Govindan R.

Nat Commun. 2018 Sep 17;9(1):3787. doi: 10.1038/s41467-018-06162-9.

15.

Defining Dynamics of Membrane-Bound Pyrophosphatases by Experimental and Computational Single-Molecule FRET.

Harborne SPD, Strauss J, Turku A, Watson MA, Tuma R, Harris SA, Goldman A.

Methods Enzymol. 2018;607:93-130. doi: 10.1016/bs.mie.2018.04.017.

PMID:
30149870
16.

Functional Annotation of ESR1 Gene Fusions in Estrogen Receptor-Positive Breast Cancer.

Lei JT, Shao J, Zhang J, Iglesia M, Chan DW, Cao J, Anurag M, Singh P, He X, Kosaka Y, Matsunuma R, Crowder R, Hoog J, Phommaly C, Goncalves R, Ramalho S, Peres RMR, Punturi N, Schmidt C, Bartram A, Jou E, Devarakonda V, Holloway KR, Lai WV, Hampton O, Rogers A, Tobias E, Parikh PA, Davies SR, Li S, Ma CX, Suman VJ, Hunt KK, Watson MA, Hoadley KA, Thompson EA, Chen X, Kavuri SM, Creighton CJ, Maher CA, Perou CM, Haricharan S, Ellis MJ.

Cell Rep. 2018 Aug 7;24(6):1434-1444.e7. doi: 10.1016/j.celrep.2018.07.009.

17.

Factors affecting infection of corals and larval oysters by Vibrio coralliilyticus.

Ushijima B, Richards GP, Watson MA, Schubiger CB, Häse CC.

PLoS One. 2018 Jun 19;13(6):e0199475. doi: 10.1371/journal.pone.0199475. eCollection 2018.

18.

The dialysis orders objective structured clinical examination (OSCE): a formative assessment for nephrology fellows.

Prince LK, Campbell RC, Gao SW, Kendrick J, Lebrun CJ, Little DJ, Mahoney DL, Maursetter LA, Nee R, Saddler M, Watson MA, Yuan CM; Nephrology Education Research & Development Consortium.

Clin Kidney J. 2018 Apr;11(2):149-155. doi: 10.1093/ckj/sfx082. Epub 2017 Aug 23.

19.

Distribution and ecological risk assessment of organic and inorganic pollutants in the sediments of the transnational Begej canal (Serbia-Romania).

Dubovina M, Krčmar D, Grba N, Watson MA, Rađenović D, Tomašević-Pilipović D, Dalmacija B.

Environ Pollut. 2018 May;236:773-784. doi: 10.1016/j.envpol.2018.02.014.

PMID:
29459332
20.

Weighted Averaging Scheme and Local Atomic Descriptor for pKa Prediction Based on Density Functional Theory.

Yu HS, Watson MA, Bochevarov AD.

J Chem Inf Model. 2018 Feb 26;58(2):271-286. doi: 10.1021/acs.jcim.7b00537. Epub 2018 Feb 5.

PMID:
29356524
21.

Identifying biomarkers of breast cancer micrometastatic disease in bone marrow using a patient-derived xenograft mouse model.

Pillai SG, Li S, Siddappa CM, Ellis MJ, Watson MA, Aft R.

Breast Cancer Res. 2018 Jan 2;20(1):2. doi: 10.1186/s13058-017-0927-1.

22.

Automated Transition State Search and Its Application to Diverse Types of Organic Reactions.

Jacobson LD, Bochevarov AD, Watson MA, Hughes TF, Rinaldo D, Ehrlich S, Steinbrecher TB, Vaitheeswaran S, Philipp DM, Halls MD, Friesner RA.

J Chem Theory Comput. 2017 Nov 14;13(11):5780-5797. doi: 10.1021/acs.jctc.7b00764. Epub 2017 Oct 17.

PMID:
28957627
23.

Chemical and nutritional properties of channel and hybrid catfish byproducts.

Bechtel PJ, Bland JM, Bett-Garber KL, Grimm CC, Brashear SS, Lloyd SW, Watson MA, Lea JM.

Food Sci Nutr. 2017 May 17;5(5):981-988. doi: 10.1002/fsn3.483. eCollection 2017 Sep.

24.

Complete Genome Sequence of Pseudoalteromonas piscicida Strain DE2-B, a Bacterium with Broad Inhibitory Activity toward Human and Fish Pathogens.

Richards GP, Needleman DS, Watson MA.

Genome Announc. 2017 Aug 17;5(33). pii: e00752-17. doi: 10.1128/genomeA.00752-17.

25.

Spray drying of pomegranate juice using maltodextrin/cyclodextrin blends as the wall material.

Watson MA, Lea JM, Bett-Garber KL.

Food Sci Nutr. 2017 Mar 1;5(3):820-826. doi: 10.1002/fsn3.467. eCollection 2017 May.

26.

Defocused Imaging of UV-Driven Surface-Bound Molecular Motors.

Krajnik B, Chen J, Watson MA, Cockroft SL, Feringa BL, Hofkens J.

J Am Chem Soc. 2017 May 31;139(21):7156-7159. doi: 10.1021/jacs.7b02758. Epub 2017 May 18.

PMID:
28497688
27.

Genomic characterization of HER2-positive breast cancer and response to neoadjuvant trastuzumab and chemotherapy-results from the ACOSOG Z1041 (Alliance) trial.

Lesurf R, Griffith OL, Griffith M, Hundal J, Trani L, Watson MA, Aft R, Ellis MJ, Ota D, Suman VJ, Meric-Bernstam F, Leitch AM, Boughey JC, Unzeitig G, Buzdar AU, Hunt KK, Mardis ER.

Ann Oncol. 2017 May 1;28(5):1070-1077. doi: 10.1093/annonc/mdx048.

28.

Mechanisms for Pseudoalteromonas piscicida-Induced Killing of Vibrios and Other Bacterial Pathogens.

Richards GP, Watson MA, Needleman DS, Uknalis J, Boyd EF, Fay JP.

Appl Environ Microbiol. 2017 May 17;83(11). pii: e00175-17. doi: 10.1128/AEM.00175-17. Print 2017 Jun 1.

29.

Enrichment and Molecular Analysis of Breast Cancer Disseminated Tumor Cells from Bone Marrow Using Microfiltration.

Pillai SG, Zhu P, Siddappa CM, Adams DL, Li S, Makarova OV, Amstutz P, Nunley R, Tang CM, Watson MA, Aft RL.

PLoS One. 2017 Jan 27;12(1):e0170761. doi: 10.1371/journal.pone.0170761. eCollection 2017.

30.

Direct measurements of multi-photon induced nonlinear lattice dynamics in semiconductors via time-resolved x-ray scattering.

Williams GJ, Lee S, Walko DA, Watson MA, Jo W, Lee DR, Landahl EC.

Sci Rep. 2016 Dec 22;6:39506. doi: 10.1038/srep39506.

31.

Multiconformation, Density Functional Theory-Based pKa Prediction in Application to Large, Flexible Organic Molecules with Diverse Functional Groups.

Bochevarov AD, Watson MA, Greenwood JR, Philipp DM.

J Chem Theory Comput. 2016 Dec 13;12(12):6001-6019. Epub 2016 Nov 29.

PMID:
27951674
32.

Metabolically Healthy Obesity and Development of Chronic Kidney Disease.

Little DJ, Deressa WT, Watson MA, Yuan CM.

Ann Intern Med. 2016 Nov 15;165(10):743-744. doi: 10.7326/L16-0406. No abstract available.

PMID:
27842406
33.

Volatile, anthocyanidin, quality and sensory changes in rabbiteye blueberry from whole fruit through pilot plant juice processing.

Beaulieu JC, Stein-Chisholm RE, Lloyd SW, Bett-Garber KL, Grimm CC, Watson MA, Lea JM.

J Sci Food Agric. 2017 Jan;97(2):469-478. doi: 10.1002/jsfa.7748. Epub 2016 May 31.

PMID:
27060570
34.

Response surface methodology investigation into the interactions between arsenic and humic acid in water during the coagulation process.

Watson MA, Tubić A, Agbaba J, Nikić J, Maletić S, Molnar Jazić J, Dalmacija B.

J Hazard Mater. 2016 Jul 15;312:150-158. doi: 10.1016/j.jhazmat.2016.03.002. Epub 2016 Mar 4.

PMID:
27031919
35.

Man-made molecular machines: membrane bound.

Watson MA, Cockroft SL.

Chem Soc Rev. 2016 Nov 7;45(22):6118-6129. Review.

PMID:
26932423
36.

N-Electron Valence State Perturbation Theory Based on a Density Matrix Renormalization Group Reference Function, with Applications to the Chromium Dimer and a Trimer Model of Poly(p-Phenylenevinylene).

Guo S, Watson MA, Hu W, Sun Q, Chan GK.

J Chem Theory Comput. 2016 Apr 12;12(4):1583-91. doi: 10.1021/acs.jctc.5b01225. Epub 2016 Mar 4.

PMID:
26914415
37.

An Autonomously Reciprocating Transmembrane Nanoactuator.

Watson MA, Cockroft SL.

Angew Chem Int Ed Engl. 2016 Jan 22;55(4):1345-9. doi: 10.1002/anie.201508845. Epub 2015 Dec 11.

PMID:
26661295
38.

Purification and Host Specificity of Predatory Halobacteriovorax Isolates from Seawater.

Richards GP, Fay JP, Uknalis J, Olanya OM, Watson MA.

Appl Environ Microbiol. 2015 Nov 20;82(3):922-7. doi: 10.1128/AEM.03136-15. Print 2016 Feb 1.

39.

Diffusion Monte Carlo Study of Para-Diiodobenzene Polymorphism Revisited.

Hongo K, Watson MA, Iitaka T, Aspuru-Guzik A, Maezono R.

J Chem Theory Comput. 2015 Mar 10;11(3):907-17. doi: 10.1021/ct500401p. Epub 2015 Mar 2.

PMID:
26579744
40.

Construction of the Fock Matrix on a Grid-Based Molecular Orbital Basis Using GPGPUs.

Losilla SA, Watson MA, Aspuru-Guzik A, Sundholm D.

J Chem Theory Comput. 2015 May 12;11(5):2053-62. doi: 10.1021/ct501128u.

PMID:
26574409
41.

Live substrate positively affects root growth and stolon direction in the woodland strawberry, Fragaria vesca.

Waters EM, Watson MA.

Front Plant Sci. 2015 Sep 30;6:814. doi: 10.3389/fpls.2015.00814. eCollection 2015.

42.

Paired-like Homeodomain Transcription factor 2 expression by breast cancer bone marrow disseminated tumor cells is associated with early recurrent disease development.

Pillai SG, Dasgupta N, Siddappa CM, Watson MA, Fleming T, Trinkaus K, Aft R.

Breast Cancer Res Treat. 2015 Oct;153(3):507-17. doi: 10.1007/s10549-015-3576-z. Epub 2015 Sep 23.

43.

Brain Metastases at Presentation in Patients With Non-Small Cell Lung Cancer.

Waqar SN, Waqar SH, Trinkaus K, Gadea CA, Robinson CG, Bradley J, Watson MA, Puri V, Govindan R, Morgensztern D.

Am J Clin Oncol. 2018 Jan;41(1):36-40. doi: 10.1097/COC.0000000000000230.

44.

caTissue Suite to OpenSpecimen: Developing an extensible, open source, web-based biobanking management system.

McIntosh LD, Sharma MK, Mulvihill D, Gupta S, Juehne A, George B, Khot SB, Kaushal A, Watson MA, Nagarajan R.

J Biomed Inform. 2015 Oct;57:456-64. doi: 10.1016/j.jbi.2015.08.020. Epub 2015 Aug 29.

45.

Reply to the letter.

Little DJ, Nee R, Watson MA, Abbott KC, Yuan CM.

Clin Nephrol. 2015 Jun;83(6):382-3. No abstract available.

PMID:
26221660
46.

DNA modulates solvent isotope effects in a nanopore.

Watson MA, Cockroft SL.

Chem Commun (Camb). 2015 Aug 7;51(61):12243-6. doi: 10.1039/c5cc01563d.

PMID:
26135014
47.

Survival Disparity of African American Versus Non-African American Patients With ESRD Due to SLE.

Nee R, Martinez-Osorio J, Yuan CM, Little DJ, Watson MA, Agodoa L, Abbott KC.

Am J Kidney Dis. 2015 Oct;66(4):630-7. doi: 10.1053/j.ajkd.2015.04.011. Epub 2015 May 19.

PMID:
26002293
48.

Flavor of fresh blueberry juice and the comparison to amount of sugars, acids, anthocyanidins, and physicochemical measurements.

Bett-Garber KL, Lea JM, Watson MA, Grimm CC, Lloyd SW, Beaulieu JC, Stein-Chisholm RE, Andrzejewski BP, Marshall DA.

J Food Sci. 2015 Apr;80(4):S818-27. doi: 10.1111/1750-3841.12821. Epub 2015 Mar 28.

PMID:
25816898
49.

Complete Genome Sequence for the Shellfish Pathogen Vibrio coralliilyticus RE98 Isolated from a Shellfish Hatchery.

Richards GP, Bono JL, Watson MA, Needleman DS.

Genome Announc. 2014 Dec 18;2(6). pii: e01253-14. doi: 10.1128/genomeA.01253-14.

50.

Complete Genome Sequence of the Larval Shellfish Pathogen Vibrio tubiashii Type Strain ATCC 19109.

Richards GP, Needleman DS, Watson MA, Bono JL.

Genome Announc. 2014 Dec 18;2(6). pii: e01252-14. doi: 10.1128/genomeA.01252-14.

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