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Syntrophy via Interspecies H2 Transfer between Christensenella and Methanobrevibacter Underlies Their Global Cooccurrence in the Human Gut.

Ruaud A, Esquivel-Elizondo S, de la Cuesta-Zuluaga J, Waters JL, Angenent LT, Youngblut ND, Ley RE.

mBio. 2020 Feb 4;11(1). pii: e03235-19. doi: 10.1128/mBio.03235-19.


Quantitative trait loci (QTL) underlying phenotypic variation in bioethanol-related processes in Neurospora crassa.

Waters JC, Jhaveri D, Biffinger JC, Lee K.

PLoS One. 2020 Feb 4;15(2):e0221737. doi: 10.1371/journal.pone.0221737. eCollection 2020.


Mixed chimerism and acceptance of kidney transplants after immunosuppressive drug withdrawal.

Busque S, Scandling JD, Lowsky R, Shizuru J, Jensen K, Waters J, Wu HH, Sheehan K, Shori A, Choi O, Pham T, Fernandez Vina MA, Hoppe R, Tamaresis J, Lavori P, Engleman EG, Meyer E, Strober S.

Sci Transl Med. 2020 Jan 29;12(528). pii: eaax8863. doi: 10.1126/scitranslmed.aax8863.


Impact of intrauterine transfusion on fetal coagulation physiology by thromboelastography.

Emery SP, Lopa S, Waters JH.

Prenat Diagn. 2020 Jan 29. doi: 10.1002/pd.5651. [Epub ahead of print]


Outcomes in three cases after brivaracetam treatment during pregnancy.

Paolini SL, Pilato M, Rajasekaran V, Waters JFR, Bagic A, Urban A.

Acta Neurol Scand. 2020 May;141(5):438-441. doi: 10.1111/ane.13222. Epub 2020 Jan 24.


Superficial Bound of the Depth Limit of Two-Photon Imaging in Mouse Brain.

Takasaki K, Abbasi-Asl R, Waters J.

eNeuro. 2020 Jan 17;7(1). pii: ENEURO.0255-19.2019. doi: 10.1523/ENEURO.0255-19.2019. Print 2020 Jan/Feb.


Habitat-Specific Clock Variation and Its Consequence on Reproductive Fitness.

Koritala BSC, Wager C, Waters JC, Pachucki R, Piccoli B, Feng Y, Scheinfeldt LB, Shende SM, Park S, Hozier JI, Lalakia P, Kumar D, Lee K.

J Biol Rhythms. 2020 Apr;35(2):134-144. doi: 10.1177/0748730419896486. Epub 2019 Dec 26.


A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex.

de Vries SEJ, Lecoq JA, Buice MA, Groblewski PA, Ocker GK, Oliver M, Feng D, Cain N, Ledochowitsch P, Millman D, Roll K, Garrett M, Keenan T, Kuan L, Mihalas S, Olsen S, Thompson C, Wakeman W, Waters J, Williams D, Barber C, Berbesque N, Blanchard B, Bowles N, Caldejon SD, Casal L, Cho A, Cross S, Dang C, Dolbeare T, Edwards M, Galbraith J, Gaudreault N, Gilbert TL, Griffin F, Hargrave P, Howard R, Huang L, Jewell S, Keller N, Knoblich U, Larkin JD, Larsen R, Lau C, Lee E, Lee F, Leon A, Li L, Long F, Luviano J, Mace K, Nguyen T, Perkins J, Robertson M, Seid S, Shea-Brown E, Shi J, Sjoquist N, Slaughterbeck C, Sullivan D, Valenza R, White C, Williford A, Witten DM, Zhuang J, Zeng H, Farrell C, Ng L, Bernard A, Phillips JW, Reid RC, Koch C.

Nat Neurosci. 2020 Jan;23(1):138-151. doi: 10.1038/s41593-019-0550-9. Epub 2019 Dec 16.


Receding ice drove parallel expansions in Southern Ocean penguins.

Cole TL, Dutoit L, Dussex N, Hart T, Alexander A, Younger JL, Clucas GV, Frugone MJ, Cherel Y, Cuthbert R, Ellenberg U, Fiddaman SR, Hiscock J, Houston D, Jouventin P, Mattern T, Miller G, Miskelly C, Nolan P, Polito MJ, Quillfeldt P, Ryan PG, Smith A, Tennyson AJD, Thompson D, Wienecke B, Vianna JA, Waters JM.

Proc Natl Acad Sci U S A. 2019 Dec 16. pii: 201904048. doi: 10.1073/pnas.1904048116. [Epub ahead of print]


Dual-plane 3-photon microscopy with remote focusing.

Takasaki KT, Tsyboulski D, Waters J.

Biomed Opt Express. 2019 Oct 8;10(11):5585-5599. doi: 10.1364/BOE.10.005585. eCollection 2019 Nov 1.


Interactions between the Gut Microbiome and Mucosal Immunoglobulins A, M, and G in the Developing Infant Gut.

Janzon A, Goodrich JK, Koren O; TEDDY Study Group, Waters JL, Ley RE.

mSystems. 2019 Nov 26;4(6). pii: e00612-19. doi: 10.1128/mSystems.00612-19.


Separation of hemodynamic signals from GCaMP fluorescence measured with wide-field imaging.

Valley MT, Moore MG, Zhuang J, Mesa N, Castelli D, Sullivan D, Reimers M, Waters J.

J Neurophysiol. 2020 Jan 1;123(1):356-366. doi: 10.1152/jn.00304.2019. Epub 2019 Nov 20.


SNP analyses reveal a diverse pool of potential colonists to earthquake-uplifted coastlines.

Peters JC, Waters JM, Dutoit L, Fraser CI.

Mol Ecol. 2020 Jan;29(1):149-159. doi: 10.1111/mec.15303. Epub 2019 Dec 4.


The human gut bacteria Christensenellaceae are widespread, heritable, and associated with health.

Waters JL, Ley RE.

BMC Biol. 2019 Oct 28;17(1):83. doi: 10.1186/s12915-019-0699-4. Review.


Free-Wilson Analysis of Comprehensive Data on Phosphoinositide-3-kinase (PI3K) Inhibitors Reveals Importance of N-Methylation for PI3Kδ Activity.

Barnes L, Blaber H, Brooks DTK, Byers L, Buckley D, Byron ZC, Chilvers RG, Cochrane L, Cooney E, Damian HA, Francis L, Fu He D, Grace JMJ, Green HJ, Hogarth EJP, Jusu L, Killalea CE, King O, Lambert J, Lee ZJ, Lima NS, Long CL, Mackinnon ML, Mahdy S, Matthews-Wright J, Millward MJ, Meehan MF, Merrett C, Morrison L, Parke HRI, Payne C, Payne L, Pike C, Seal A, Senior AJ, Smith KM, Stanelyte K, Stillibrand J, Szpara R, Taday FFH, Threadgould AM, Trainor RJ, Waters J, Williams O, Wong CKW, Wood K, Barton N, Gruszka A, Henley Z, Rowedder JE, Cookson R, Jones KL, Nadin A, Smith IE, Macdonald SJF, Nortcliffe A.

J Med Chem. 2019 Nov 27;62(22):10402-10422. doi: 10.1021/acs.jmedchem.9b01499. Epub 2019 Nov 6.


Characterization of LysBC17, a Lytic Endopeptidase from Bacillus cereus.

Swift SM, Etobayeva IV, Reid KP, Waters JJ, Oakley BB, Donovan DM, Nelson DC.

Antibiotics (Basel). 2019 Sep 19;8(3). pii: E155. doi: 10.3390/antibiotics8030155.


Phylogenetic divergence of island biotas: Molecular dates, extinction, and "relict" lineages.

McCulloch GA, Waters JM.

Mol Ecol. 2019 Oct;28(19):4354-4362. doi: 10.1111/mec.15229. Epub 2019 Sep 23.


Genomics detects population structure within and between ocean basins in a circumpolar seabird: The white-chinned petrel.

Rexer-Huber K, Veale AJ, Catry P, Cherel Y, Dutoit L, Foster Y, McEwan JC, Parker GC, Phillips RA, Ryan PG, Stanworth AJ, van Stijn T, Thompson DR, Waters J, Robertson BC.

Mol Ecol. 2019 Oct;28(20):4552-4572. doi: 10.1111/mec.15248. Epub 2019 Oct 21.


Comparative transcriptomic analysis of a wing-dimorphic stonefly reveals candidate wing loss genes.

McCulloch GA, Oliphant A, Dearden PK, Veale AJ, Ellen CW, Waters JM.

Evodevo. 2019 Sep 6;10:21. doi: 10.1186/s13227-019-0135-4. eCollection 2019.


Identification of genetic markers for cortical areas using a Random Forest classification routine and the Allen Mouse Brain Atlas.

Weed N, Bakken T, Graddis N, Gouwens N, Millman D, Hawrylycz M, Waters J.

PLoS One. 2019 Sep 4;14(9):e0212898. doi: 10.1371/journal.pone.0212898. eCollection 2019.


Clinical Utility of Autologous Salvaged Blood: a Review.

Frank SM, Sikorski RA, Konig G, Tsilimigras DI, Hartmann J, Popovsky MA, Pawlik TM, Waters JH.

J Gastrointest Surg. 2020 Feb;24(2):464-472. doi: 10.1007/s11605-019-04374-y. Epub 2019 Aug 29.


Selective effects of errorful generation on recognition memory: the role of motivation and surprise.

Seabrooke T, Mitchell CJ, Wills AJ, Waters JL, Hollins TJ.

Memory. 2019 Oct;27(9):1250-1262. doi: 10.1080/09658211.2019.1647247. Epub 2019 Aug 1.


Long-acting reversible contraceptives for adolescent females: a review of current best practices.

Sherin M, Waters J.

Curr Opin Pediatr. 2019 Oct;31(5):675-682. doi: 10.1097/MOP.0000000000000811. Review.


More than the eye can see: Genomic insights into the drivers of genetic differentiation in Royal/Macaroni penguins across the Southern Ocean.

Frugone MJ, López ME, Segovia NI, Cole TL, Lowther A, Pistorius P, Dantas GPM, Petry MV, Bonadonna F, Trathan P, Polanowski A, Wienecke B, Bi K, Wang-Claypool CY, Waters JM, Bowie RCK, Poulin E, Vianna JA.

Mol Phylogenet Evol. 2019 Oct;139:106563. doi: 10.1016/j.ympev.2019.106563. Epub 2019 Jul 16.


Prevalence of Gambling Disorder Among Prisoners: A Systematic Review.

Banks J, Waters J, Andersson C, Olive V.

Int J Offender Ther Comp Criminol. 2019 Jul 17:306624X19862430. doi: 10.1177/0306624X19862430. [Epub ahead of print]


Safety and Efficacy of the Addition of Lapatinib to Perioperative Chemotherapy for Resectable HER2-Positive Gastroesophageal Adenocarcinoma: A Randomized Phase 2 Clinical Trial.

Smyth EC, Rowley S, Cafferty FH, Allum W, Grabsch HI, Stenning S, Wotherspoon A, Alderson D, Crosby T, Mansoor W, Waters JS, Neville-Webbe H, Darby S, Dent J, Seymour M, Thompson J, Sothi S, Blazeby J, Langley RE, Cunningham D.

JAMA Oncol. 2019 Jun 20. doi: 10.1001/jamaoncol.2019.1179. [Epub ahead of print]


Implementation of tranexamic acid reduces red blood cell utilization in orthopedic surgeries.

Kaplan A, Wisniewski M, Waters JH, Yazer MH.

Transfusion. 2019 Sep;59(9):2774-2775. doi: 10.1111/trf.15403. Epub 2019 Jun 18. No abstract available.


Niraparib Maintenance Therapy in Patients With Recurrent Ovarian Cancer After a Partial Response to the Last Platinum-Based Chemotherapy in the ENGOT-OV16/NOVA Trial.

Del Campo JM, Matulonis UA, Malander S, Provencher D, Mahner S, Follana P, Waters J, Berek JS, Woie K, Oza AM, Canzler U, Gil-Martin M, Lesoin A, Monk BJ, Lund B, Gilbert L, Wenham RM, Benigno B, Arora S, Hazard SJ, Mirza MR.

J Clin Oncol. 2019 Nov 10;37(32):2968-2973. doi: 10.1200/JCO.18.02238. Epub 2019 Jun 7.


How do I perform cell salvage in obstetrics?

Waters JH, Beck S, Yazer MH.

Transfusion. 2019 Jul;59(7):2199-2202. doi: 10.1111/trf.15352. Epub 2019 May 30.


Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse.

Waters J, Lee E, Gaudreault N, Griffin F, Lecoq J, Slaughterbeck C, Sullivan D, Farrell C, Perkins J, Reid D, Feng D, Graddis N, Garrett M, Li Y, Long F, Mochizuki C, Roll K, Zhuang J, Thompson C.

PLoS One. 2019 May 1;14(5):e0213924. doi: 10.1371/journal.pone.0213924. eCollection 2019.


Ecological gradients drive insect wing loss and speciation: The role of the alpine treeline.

McCulloch GA, Foster BJ, Dutoit L, Ingram T, Hay E, Veale AJ, Dearden PK, Waters JM.

Mol Ecol. 2019 Jul;28(13):3141-3150. doi: 10.1111/mec.15114. Epub 2019 May 25.


Human Salivary Amylase Gene Copy Number Impacts Oral and Gut Microbiomes.

Poole AC, Goodrich JK, Youngblut ND, Luque GG, Ruaud A, Sutter JL, Waters JL, Shi Q, El-Hadidi M, Johnson LM, Bar HY, Huson DH, Booth JG, Ley RE.

Cell Host Microbe. 2019 Apr 10;25(4):553-564.e7. doi: 10.1016/j.chom.2019.03.001.


Designing a rigorous microscopy experiment: Validating methods and avoiding bias.

Jost AP, Waters JC.

J Cell Biol. 2019 May 6;218(5):1452-1466. doi: 10.1083/jcb.201812109. Epub 2019 Mar 20. Review.


Stenting the Upper/Cervical Oesophagus with a Proximal Deployment Cervical Oesophageal Stent: Technique and Outcomes.

Rabone A, Kawa B, Thomson B, Kemp S, Elwood C, Okaro A, Hill M, Sevitt T, Waters J, Ignotus P, Shaw A.

Cardiovasc Intervent Radiol. 2019 Jul;42(7):1024-1028. doi: 10.1007/s00270-019-02201-0. Epub 2019 Mar 19.


Diagnostic implications of genetic copy number variation in epilepsy plus.

Coppola A, Cellini E, Stamberger H, Saarentaus E, Cetica V, Lal D, Djémié T, Bartnik-Glaska M, Ceulemans B, Helen Cross J, Deconinck T, Masi S, Dorn T, Guerrini R, Hoffman-Zacharska D, Kooy F, Lagae L, Lench N, Lemke JR, Lucenteforte E, Madia F, Mefford HC, Morrogh D, Nuernberg P, Palotie A, Schoonjans AS, Striano P, Szczepanik E, Tostevin A, Vermeesch JR, Van Esch H, Van Paesschen W, Waters JJ, Weckhuysen S, Zara F, De Jonghe P, Sisodiya SM, Marini C; EuroEPINOMICS-RES Consortium; EpiCNV Consortium.

Epilepsia. 2019 Apr;60(4):689-706. doi: 10.1111/epi.14683. Epub 2019 Mar 13.


Patient Blood Management: Recommendations From the 2018 Frankfurt Consensus Conference.

Mueller MM, Van Remoortel H, Meybohm P, Aranko K, Aubron C, Burger R, Carson JL, Cichutek K, De Buck E, Devine D, Fergusson D, Folléa G, French C, Frey KP, Gammon R, Levy JH, Murphy MF, Ozier Y, Pavenski K, So-Osman C, Tiberghien P, Volmink J, Waters JH, Wood EM, Seifried E; ICC PBM Frankfurt 2018 Group.

JAMA. 2019 Mar 12;321(10):983-997. doi: 10.1001/jama.2019.0554.


Fluoroscopic Guided Transluminal Biopsy of the Oesophagus and Ureter with a Biliary Biopsy Forceps Kit.

Thomson B, Kawa B, Rabone A, Waters J, Hill M, Sevitt T, Ignotus P, Shaw A.

Cardiovasc Intervent Radiol. 2019 Jul;42(7):1045-1047. doi: 10.1007/s00270-019-02190-0. Epub 2019 Feb 26. No abstract available.


Mitogenomes Uncover Extinct Penguin Taxa and Reveal Island Formation as a Key Driver of Speciation.

Cole TL, Ksepka DT, Mitchell KJ, Tennyson AJD, Thomas DB, Pan H, Zhang G, Rawlence NJ, Wood JR, Bover P, Bouzat JL, Cooper A, Fiddaman SR, Hart T, Miller G, Ryan PG, Shepherd LD, Wilmshurst JM, Waters JM.

Mol Biol Evol. 2019 Apr 1;36(4):784-797. doi: 10.1093/molbev/msz017.


Patterns of Tracheal Compression in the Thorax of the Ground Beetle, Platynus decentis.

Hochgraf JS, Waters JS, Socha JJ.

Yale J Biol Med. 2018 Dec 21;91(4):409-430. eCollection 2018 Dec.


Use of rectal mucosal grafts in substitution urethroplasty: an early series.

Monn MF, Waters JA, Mellon MJ.

Transl Androl Urol. 2018 Dec;7(6):907-911. doi: 10.21037/tau.2018.10.12.


Multiresponsive polymeric microstructures with encoded predetermined and self-regulated deformability.

Yao Y, Waters JT, Shneidman AV, Cui J, Wang X, Mandsberg NK, Li S, Balazs AC, Aizenberg J.

Proc Natl Acad Sci U S A. 2018 Dec 18;115(51):12950-12955. doi: 10.1073/pnas.1811823115. Epub 2018 Dec 4.


Management of Myasthenia Gravis in Pregnancy.

Waters J.

Neurol Clin. 2019 Feb;37(1):113-120. doi: 10.1016/j.ncl.2018.09.003. Review.


Visual physiology of the layer 4 cortical circuit in silico.

Arkhipov A, Gouwens NW, Billeh YN, Gratiy S, Iyer R, Wei Z, Xu Z, Abbasi-Asl R, Berg J, Buice M, Cain N, da Costa N, de Vries S, Denman D, Durand S, Feng D, Jarsky T, Lecoq J, Lee B, Li L, Mihalas S, Ocker GK, Olsen SR, Reid RC, Soler-Llavina G, Sorensen SA, Wang Q, Waters J, Scanziani M, Koch C.

PLoS Comput Biol. 2018 Nov 12;14(11):e1006535. doi: 10.1371/journal.pcbi.1006535. eCollection 2018 Nov.


Multimodal Patient Blood Management Program Based on a Three-pillar Strategy: A Systematic Review and Meta-analysis.

Althoff FC, Neb H, Herrmann E, Trentino KM, Vernich L, Füllenbach C, Freedman J, Waters JH, Farmer S, Leahy MF, Zacharowski K, Meybohm P, Choorapoikayil S.

Ann Surg. 2019 May;269(5):794-804. doi: 10.1097/SLA.0000000000003095.


Perioperative Management of Patients with Colovesical Fistula.

Dolejs SC, Penning AJ, Guzman MJ, Fajardo AD, Holcomb BK, Robb BW, Waters JA.

J Gastrointest Surg. 2019 Sep;23(9):1867-1873. doi: 10.1007/s11605-018-4034-0. Epub 2018 Nov 8.


Genotyping-by-sequencing supports a genetic basis for wing reduction in an alpine New Zealand stonefly.

Veale AJ, Foster BJ, Dearden PK, Waters JM.

Sci Rep. 2018 Nov 2;8(1):16275. doi: 10.1038/s41598-018-34123-1.


FLIRT: fast local infrared thermogenetics for subcellular control of protein function.

Hirsch SM, Sundaramoorthy S, Davies T, Zhuravlev Y, Waters JC, Shirasu-Hiza M, Dumont J, Canman JC.

Nat Methods. 2018 Nov;15(11):921-923. doi: 10.1038/s41592-018-0168-y. Epub 2018 Oct 30.


Ancient DNA of crested penguins: Testing for temporal genetic shifts in the world's most diverse penguin clade.

Cole TL, Rawlence NJ, Dussex N, Ellenberg U, Houston DM, Mattern T, Miskelly CM, Morrison KW, Scofield RP, Tennyson AJD, Thompson DR, Wood JR, Waters JM.

Mol Phylogenet Evol. 2019 Feb;131:72-79. doi: 10.1016/j.ympev.2018.10.025. Epub 2018 Oct 25.


Management of Anesthesia and Delivery in Women With Chiari I Malformations.

Waters JFR, OʼNeal MA, Pilato M, Waters S, Larkin JC, Waters JH.

Obstet Gynecol. 2018 Nov;132(5):1180-1184. doi: 10.1097/AOG.0000000000002943.


Accelerated, but not conventional, radiotherapy of murine B-cell lymphoma induces potent T cell-mediated remissions.

Dutt S, Atallah MB, Minamida Y, Filatenkov A, Jensen KP, Iliopoulou BP, Tamosiuniene R, Waters J, Engleman EG, Strober S.

Blood Adv. 2018 Oct 9;2(19):2568-2580. doi: 10.1182/bloodadvances.2018023119.

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